BAC Information

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BAC

Clone NameB6Ng01-193K03
Chromosome18 (Build37)
Map Location 90,401,183 - 90,402,271
singlet/doubletsinglet
Overlap genenone
Upstream geneCd226, Dok6, LOC383320, LOC620693
Downstream geneEif3s6-ps2, LOC665526, Txndc10, LOC666779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193K03.bB6Ng01-193K03.g
ACCGA016550GA016551
length1,2141,077
definitionB6Ng01-193K03.b B6Ng01-193K03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagtgtccttggaaatgggaccaggctataagtttgtagagag
caaccaattgtcttagcaacaacttggggttgtttagggatttcagtggg
acctctttggccaacaactcaactgaatataacccaaccattttacatga
agcctctttttgtgataagagatgctcaattgggactctgtgagaagcca
tctaggagagatgaaagagtaacagatggttttctgaaaatagcccatca
ttttgcttgtgtgcaatggataaactctaaaattgcaaggcttttagata
gttcgtctcagaattgattcttgctattatgtcttccctgctagtattaa
atagtataatgattcctgggcattagcctgtcctattggacagatttttt
tttttttttttttttttttttttttttttttttttttttttttttggccg
ttcaacccaaaaatactcccttgggggaattgtttataaacaaaaaaaag
attttttaaattcccaaaaaagattttataaaattcccaaatttatacca
aaaatttgagccctctataaaaaagggtgcaattaggggtctgtaaatct
tcaagtggcacaaaataattgtctttggataaaaaacagggtttgatcag
ggaaaacatttcccttctaggccagttgtaaaaaaattttctgataacca
aagtttctaaacaggggttggaaaattttttgggggggcaaggaccgaag
gaaaaaaaattgtccccaaactaatgaaacaaaagggaaataatttgctt
cttgacaaaaatgggctaacccctggcaaaaaaatatcggttttagccct
taatggcccctgggagctgggggaaaaaagggaagttttatttaaaaact
aaccttaatagaaaccccggaaacaccctcggccaaaactcttattcaat
tttggattaaatattggtttaaactgggacctttggaaaaggtgctgtga
ataccatgtgctcctatatcccgaaaagaagagaataagctagcaataga
agtggttccctttgttttcttagaaatagaaatctaatggaggcgctctt
tctgcagacagacttctctcacactgaccgagtagatatggactctcggc
ctgcaggagatcaaggcctatcatatccccgtttagtatgatgtgtgtat
ctcaggatactata
gaattcctcactatagctaagatgtataaagtgtattttcttacatgaat
gaataaaaatatttgacatattttaaatatcattgttttccttctatttt
ttttaattattattatgtcattcctctcctcttctttcttacttgcaaat
cttcccacataccactccttgcttgctttcaaattcatggcttctctttc
ttttaattgttgcaatattcatatataattcataaacataattaaatagc
actccatatggacagtctagcaacaacatgtataaacatgtaagacatga
aagtggaaccaacaggcatctgaaaataaatactatatgagatcaattga
ttgtgtggtagtttgaataagaatagtactcacaagctcctttacctaaa
tatttgctcctccattggtacaaatttttgtgaagggctaggggctattg
ttttgtaggctttaaggttttaaaacctacacttttcccagttaattcat
tcttcctcctgtctgtggatgttagaagctctcaattactgctctgccat
catgcctgcttgcctgatgccgtgtctttttgccatgatgagtatggact
gtaaacctctggatccatgaaatccaaataaaaagcttcagaagaggaca
taatatttgcaggccatatatataagcttctttttaagttgccttgtata
ttgtacaataaaaaagtaactaagacattgtagaatcattcaaaatcaaa
tccacagaatctgatactaagaaaattggtaccaaggatatatagaaggt
acatagcgacatggaggcaatgggccaatggtttattttcacaatatgta
ggatatatcaacttggagaatacaaggcaccacaggagttactacagcta
tttatattatattacacacaggaatttatcttaagtacagctgattatgc
tttcccatgtaatggagaattgtttctttaaaacacagtatgtatggttt
tgttttatcccagctatgggatagaggatctcaattggcaactgctagga
ttgtctgtgctctggcaggaatagctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_90401183_90402271
seq2: B6Ng01-193K03.g_64_1140

seq1  GAATTCCTCACTATAGCTAAGATGTATAAAGTGTATTTTCTTACATGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCACTATAGCTAAGATGTATAAAGTGTATTTTCTTACATGAAT  50

seq1  GAATAAAAATATTTGACATATTTTAAATATCATTGTTTTCCTTCTATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAAATATTTGACATATTTTAAATATCATTGTTTTCCTTCTATTTT  100

seq1  TTTTAATTATTATTATGTCATTCCTCTCCTCTTCTTTCTTACTTGCAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTATTATTATGTCATTCCTCTCCTCTTCTTTCTTACTTGCAAAT  150

seq1  CTTCCCACATACCACTCCTTGCTTGCTTTCAAATTCATGGCTTCTCTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCACATACCACTCCTTGCTTGCTTTCAAATTCATGGCTTCTCTTTC  200

seq1  TTTTAATTGTTGCAATATTCATATATAATTCATAAACATAATTAAATAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTGTTGCAATATTCATATATAATTCATAAACATAATTAAATAGC  250

seq1  ACTCCATATGGACAGTCTAGCAACAACATGTATAAACATGTAAGACATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATATGGACAGTCTAGCAACAACATGTATAAACATGTAAGACATGA  300

seq1  AAGTGGAACCAACAGGCATCTGAAAATAAATACTATATGAGATCAATTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGAACCAACAGGCATCTGAAAATAAATACTATATGAGATCAATTGA  350

seq1  TTGTGTGGTAGTTTGAATAAGAATAGTACTCACAAGCTCCTTTACCTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGGTAGTTTGAATAAGAATAGTACTCACAAGCTCCTTTACCTAAA  400

seq1  TATTTGCTCCTCCATTGGTACAAATTTTTGTGAAGGGCTAGGGGCTATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCTCCTCCATTGGTACAAATTTTTGTGAAGGGCTAGGGGCTATTG  450

seq1  TTTTGTAGGCTTTAAGGTTTTAAAACCTACACTTTTCCCAGTTAATTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTAGGCTTTAAGGTTTTAAAACCTACACTTTTCCCAGTTAATTCAT  500

seq1  TCTTCCTCCTGTCTGTGGATGTTAGAAGCTCTCAATTACTGCTCTGCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCCTGTCTGTGGATGTTAGAAGCTCTCAATTACTGCTCTGCCAT  550

seq1  CATGCCTGCTTGCCTGATGCCGTGTCTTTTTGCCATGATGAGTATGGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTGCTTGCCTGATGCCGTGTCTTTTTGCCATGATGAGTATGGACT  600

seq1  GTAAACCTCTGGATCCATGAAATCCAAATAAAAAGCTTCAGAAGAGGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACCTCTGGATCCATGAAATCCAAATAAAAAGCTTCAGAAGAGGACA  650

seq1  TAATATTTGCAGGCCATATATATAAGCTTCTTTTTAAGTTGCCTTGTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTGCAGGCCATATATATAAGCTTCTTTTTAAGTTGCCTTGTATA  700

seq1  TTGTACAATAAAAAAGTAACTAAGACATTGTAGAATCATTCAAAAATCAA  750
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTGTACAATAAAAAAGTAACTAAGACATTGTAGAATCATTC-AAAATCAA  749

seq1  ATCCACAGAATCTGATACTAAGAAAATTGGTACCAAGGATATATAGAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACAGAATCTGATACTAAGAAAATTGGTACCAAGGATATATAGAAGG  799

seq1  TACATAGCGACATGGAGGCAAT-GGCCAATGGTTTATTTTCAC-ATATGT  848
      |||||||||||||||||||||| |||||||||||||||||||| ||||||
seq2  TACATAGCGACATGGAGGCAATGGGCCAATGGTTTATTTTCACAATATGT  849

seq1  AGGATATATCAACTTGGAG-ATACAAGGCACCACA-GAGTAACTACAGCT  896
      ||||||||||||||||||| ||||||||||||||| |||| |||||||||
seq2  AGGATATATCAACTTGGAGAATACAAGGCACCACAGGAGTTACTACAGCT  899

seq1  ATTTATATTATATTACACACAGGAATTTATCTTAAGTACAGCTGATATAT  946
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATTTATATTATATTACACACAGGAATTTATCTTAAGTACAGCTGAT-TAT  948

seq1  GCTTTTCACATGTAAT-GAGAATTGGTTTCTTTAAAAACACAGTTATGTA  995
      || |||| |||||||| ||||||| |||||||| ||||||||| ||||||
seq2  GC-TTTCCCATGTAATGGAGAATT-GTTTCTTT-AAAACACAG-TATGTA  994

seq1  TGTTTTTGTTTTAATCCCAGGTATGGGATAGAGGATACTTCAGATTGCCC  1045
      || ||||||||| ||||||| |||||||||||||||   ||| |||| | 
seq2  TGGTTTTGTTTT-ATCCCAGCTATGGGATAGAGGAT--CTCA-ATTGGC-  1039

seq1  AAAACTGCTATGATTTGTCTTGTGCTCTGGCAGGGATGTAGCTG  1089
        |||||||| || ||||| |||||||||||||| |  ||||||
seq2  --AACTGCTAGGA-TTGTC-TGTGCTCTGGCAGGAA--TAGCTG  1077