BAC Information

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BAC

Clone NameB6Ng01-193N06
Chromosome18 (Build37)
Map Location 32,081,754 - 32,254,799
singlet/doubletdoublet
Overlap geneLims2, Gpr17, Myo7b, Iws1
Upstream geneRit2, EG666130, Syt4, LOC383420, Slc25a46, Sap130, LOC640549, Ammecr1l, Polr2d, EG626327, Wdr33, Sft2d3
Downstream geneProc, LOC546710, Map3k2, Ercc3, Bin1, Gypc, LOC100041160, LOC100041170, Tslp, Wdr36, Camk4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193N06.bB6Ng01-193N06.g
ACCGA016688GA016689
length1,083776
definitionB6Ng01-193N06.b B6Ng01-193N06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,253,725 - 32,254,799)(32,081,754 - 32,082,525)
sequence
gaattccattacagatggttgtgagccaccatgtggttactgggaattga
actcaggacctctgaaagaacagtgctcttaaccactgagccatctctcc
agccccaaaataaaaagtttttttttaaatcagaaataaactagtaagta
tatattcatataaatcacaaagactattacatatcccttaaaaataaatc
tcccacgtaaattaatgaggagaaatgaacaaaacaatatgctgatagag
ctaaattttggaagcctagataaatatcagcaaatgattggaaacgcggg
atgagagctctccttcatactggaggaaaagaatatacagctctcctatt
ccctctccctacaaggatatgggctcataacaagccacaacagatgatgg
gcacatgggcccaagaaacgtagaccatgcttccagagcagaccagccaa
caaacttttattacattttcatgcctgcactgtcatttccaactttcaaa
aacaaaagtattaggaaaggggatataaataaggtggctaaactaaggta
gcatatagtgagaaaatataaggtggttaaaaaaagaaataagtataagg
aggaatagaaggagaagtggccatcaatttagatatggaaccagaaaaca
ggaagtccgtgtggaggaagtaccacctacataaagcccatctcctttac
ttagttttcagtagttatgagcacaccgtagcaagaacataaaggaactg
aaaggaacctgagggaggagcacaaaggcagcaagagactgtgcccagca
gtggggtgtactctccatctcaatgtcactggcttacaaccaggtgatga
atgcccgttgaatatacctacagatccagtagtaggagttaagtagtgag
ttcttgatgaatgctatcatgtcactgactattaggaaaaagtcaccttc
ttgtgcaccaacaactacttaggcagttttgttattacttgtaatgcaga
ctatggacctctgggttccaaatataaaagccttttcagctggtagtggt
gtatcattggccttttcttccagcactcaggag
gaattcatgtttctttgccagcccttctgaaatcagagggcgctgtcact
acttttgtcctgtcatcctggatctccagggaggcaggcttttccttcct
aaacctcggtcctagctcgtccttagctgaccccaaagtgcttccggcca
caccttctaggcttggacctcaggccaagtctcctgcctaggcagaggtg
agactggagctgagcgtctgggagctgcggtggtgggactctggttaccg
cccagtctcgctctccatgtggctgtgccaaacaggctgggcagctgctg
ttgcccttggaggagctacaggcagctctcaggaaaggagggcccaaggg
aagtagagcatcgtctctgccaccaaggtaaagaaaagctgtgtgatgtt
ggagtaatagactttggagggtccttctgctagtcacctctggtcctctg
cccgcctgtaccctgaatctccctgcctccccttatgccctaagcgctgt
gctcgtgttgctaggtgggaatgggaacagctctaggccttctgcccacc
tggggccggtcaatgtggtagctcactcggctgcacactgcgtctcctcc
agggacacactggatttggggagtggtagggtgggctttgacttttttgg
tgaagaggttttgggaagctctgattgaaaagcttgcccatcaggattgg
ttgtcacaatgtgaaagaagaatcaaactttatccttggttttgctgatg
aaatggtcaaaaaaagttgagtgcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_32253725_32254799
seq2: B6Ng01-193N06.b_45_1127 (reverse)

seq1  CTCCTGAGTGCTGGGATTAAAGGC--ATGTATCACCACTACCCAGCTGAA  48
      |||||||||||||| |  ||||||  |||   |||||||| |||||||||
seq2  CTCCTGAGTGCTGGAAGAAAAGGCCAATGATACACCACTA-CCAGCTGAA  49

seq1  AAAGCCTTTTTATTTGG-ACCCAGAG--TCATAGTCTGCATTACAAGT-A  94
      || || ||| ||||||| ||||||||   ||||||||||||||||||| |
seq2  AAGGCTTTTATATTTGGAACCCAGAGGTCCATAGTCTGCATTACAAGTAA  99

seq1  TA--CAAACTGCCTTAGTAGTTTGTTGGTGCACAAGAA-GTGACTTTTTT  141
      ||   ||||||||| ||||| ||||||||||||||||| |||||||||| 
seq2  TAACAAAACTGCCTAAGTAG-TTGTTGGTGCACAAGAAGGTGACTTTTTC  148

seq1  CCTATAGTCAGTGACATGATAGCATTCATCAAGAACTCACTACTTAACTC  191
      |  |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAGTCAGTGACATGATAGCATTCATCAAGAACTCACTACTTAACTC  198

seq1  CTACTACTGGATCTGTAGGTATATTCAACGGGCATTCATCACCTGGTTGT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTACTGGATCTGTAGGTATATTCAACGGGCATTCATCACCTGGTTGT  248

seq1  AAGCCAGTGACATTGAGATGGAGAGTACACCCCACTGCTGGGCACAGTCT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGTGACATTGAGATGGAGAGTACACCCCACTGCTGGGCACAGTCT  298

seq1  CTTGCTGCCTTTGTGCTCCTCCCTCAGGTTCC-TTCAGTTCCTTTATGTT  340
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTTGCTGCCTTTGTGCTCCTCCCTCAGGTTCCTTTCAGTTCCTTTATGTT  348

seq1  CTTGCTACGGTGTGCTCATAACTACTGAAAACTAAGTAAAGGAGATGGGC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTACGGTGTGCTCATAACTACTGAAAACTAAGTAAAGGAGATGGGC  398

seq1  TTTATGTAGGTGGTACTTCCTCCACACGGACTTCCTGTTTTCTGGTTCCA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTAGGTGGTACTTCCTCCACACGGACTTCCTGTTTTCTGGTTCCA  448

seq1  TATCTAAATTGATGGCCACTTCTCCTTCTATTCCTCCTTATACTTATTTC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAATTGATGGCCACTTCTCCTTCTATTCCTCCTTATACTTATTTC  498

seq1  TTTTTTTAACCACCTTATATTTTCTCACTATATGCTACCTTAGTTTAGCC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAACCACCTTATATTTTCTCACTATATGCTACCTTAGTTTAGCC  548

seq1  ACCTTATTTATATCCCCTTTCCTAATACTTTTGTTTTTGAAAGTTGGAAA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTATTTATATCCCCTTTCCTAATACTTTTGTTTTTGAAAGTTGGAAA  598

seq1  TGACAGTGCAGGCATGAAAATGTAATAAAAGTTTGTTGGCTGGTCTGCTC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGTGCAGGCATGAAAATGTAATAAAAGTTTGTTGGCTGGTCTGCTC  648

seq1  TGGAAGCATGGTCTACGTTTCTTGGGCCCATGTGCCCATCATCTGTTGTG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCATGGTCTACGTTTCTTGGGCCCATGTGCCCATCATCTGTTGTG  698

seq1  GCTTGTTATGAGCCCATATCCTTGTAGGGAGAGGGAATAGGAGAGCTGTA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTATGAGCCCATATCCTTGTAGGGAGAGGGAATAGGAGAGCTGTA  748

seq1  TATTCTTTTCCTCCAGTATGAAGGAGAGCTCTCATCCCGCGTTTCCAATC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTTCCTCCAGTATGAAGGAGAGCTCTCATCCCGCGTTTCCAATC  798

seq1  ATTTGCTGATATTTATCTAGGCTTCCAAAATTTAGCTCTATCAGCATATT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTGATATTTATCTAGGCTTCCAAAATTTAGCTCTATCAGCATATT  848

seq1  GTTTTGTTCATTTCTCCTCATTAATTTACGTGGGAGATTTATTTTTAAGG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTCATTTCTCCTCATTAATTTACGTGGGAGATTTATTTTTAAGG  898

seq1  GATATGTAATAGTCTTTGTGATTTATATGAATATATACTTACTAGTTTAT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGTAATAGTCTTTGTGATTTATATGAATATATACTTACTAGTTTAT  948

seq1  TTCTGATTTAAAAAAAAACTTTTTATTTTGGGGCTGGAGAGATGGCTCAG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATTTAAAAAAAAACTTTTTATTTTGGGGCTGGAGAGATGGCTCAG  998

seq1  TGGTTAAGAGCACTGTTCTTTCAGAGGTCCTGAGTTCAATTCCCAGTAAC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAAGAGCACTGTTCTTTCAGAGGTCCTGAGTTCAATTCCCAGTAAC  1048

seq1  CACATGGTGGCTCACAACCATCTGTAATGGAATTC  1075
      |||||||||||||||||||||||||||||||||||
seq2  CACATGGTGGCTCACAACCATCTGTAATGGAATTC  1083

seq1: chr18_32081754_32082525
seq2: B6Ng01-193N06.g_67_841

seq1  GAATTCATGTTTCTTTGCCAGCCCTTCTGAAATCAGAGGGCGCTGTCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTTTCTTTGCCAGCCCTTCTGAAATCAGAGGGCGCTGTCACT  50

seq1  ACTTTTGTCCTGTCATCCTGGATCTCCAGGGAGGCAGGCTTTTCCTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGTCCTGTCATCCTGGATCTCCAGGGAGGCAGGCTTTTCCTTCCT  100

seq1  AAACCTCGGTCCTAGCTCGTCCTTAGCTGACCCCAAAGTGCTTCCGGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCGGTCCTAGCTCGTCCTTAGCTGACCCCAAAGTGCTTCCGGCCA  150

seq1  CACCTTCTAGGCTTGGACCTCAGGCCAAGTCTCCTGCCTAGGCAGAGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCTAGGCTTGGACCTCAGGCCAAGTCTCCTGCCTAGGCAGAGGTG  200

seq1  AGACTGGAGCTGAGCGTCTGGGAGCTGCGGTGGTGGGACTCTGGTTACCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGAGCTGAGCGTCTGGGAGCTGCGGTGGTGGGACTCTGGTTACCG  250

seq1  CCCAGTCTCGCTCTCCATGTGGCTGTGCCAAACAGGCTGGGCAGCTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCTCGCTCTCCATGTGGCTGTGCCAAACAGGCTGGGCAGCTGCTG  300

seq1  TTGCCCTTGGAGGAGCTACAGGCAGCTCTCAGGAAAGGAGGGCCCAAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTTGGAGGAGCTACAGGCAGCTCTCAGGAAAGGAGGGCCCAAGGG  350

seq1  AAGTAGAGCATCGTCTCTGCCACCAAGGTAAAGAAAAGCTGTGTGATGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAGCATCGTCTCTGCCACCAAGGTAAAGAAAAGCTGTGTGATGTT  400

seq1  GGAGTAATAGACTTTGGAGGGTCCTTCTGCTAGTCACCTCTGGTCCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAATAGACTTTGGAGGGTCCTTCTGCTAGTCACCTCTGGTCCTCTG  450

seq1  CCCGCCTGTACCCTGAATCTCCCTGCCTCCCCTTATGCCCTAAGCGCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCCTGTACCCTGAATCTCCCTGCCTCCCCTTATGCCCTAAGCGCTGT  500

seq1  GCTCGTGTTGCTAGGTGGGAATGGGAACAGCTCTAGGCCTTCTGCCCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGTGTTGCTAGGTGGGAATGGGAACAGCTCTAGGCCTTCTGCCCACC  550

seq1  TGGGGCCGGTCAATGTGGTAGCTCACTCGGCTGCACACTGCGTCTCCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCCGGTCAATGTGGTAGCTCACTCGGCTGCACACTGCGTCTCCTCC  600

seq1  AGGGACACACTGGATTTGGGGAGTGGTAGGGTGGGCTTTGACTTTTTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACACACTGGATTTGGGGAGTGGTAGGGTGGGCTTTGACTTTTTTGG  650

seq1  TGAAGAGG-TTTGGGAAGCTCTGA-TGAAAAGCTTGCCCATCAGGATTGG  698
      |||||||| ||||||||||||||| |||||||||||||||||||||||||
seq2  TGAAGAGGTTTTGGGAAGCTCTGATTGAAAAGCTTGCCCATCAGGATTGG  700

seq1  TTGTCACAATGTGAAAGAAGAAGCAAAACGTAT-CTTGG-TTTGCTGATG  746
      |||||||||||||||||||||| ||||   ||| ||||| ||||||||||
seq2  TTGTCACAATGTGAAAGAAGAATCAAACTTTATCCTTGGTTTTGCTGATG  750

seq1  AGATGGTCAAAGAAAAGTTGAGTGCC  772
      | ||||||||| ||||||||||||||
seq2  AAATGGTCAAA-AAAAGTTGAGTGCC  775