BAC Information

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BAC

Clone NameB6Ng01-195G05
Chromosome18 (Build37)
Map Location 26,065,291 - 26,192,866
singlet/doubletdoublet
Overlap geneLOC100041274
Upstream geneFhod3, 5730494M16Rik, AW554918, Brunol4, LOC100041241, LOC665916, LOC100041263
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195G05.bB6Ng01-195G05.g
ACCGA017823GA017824
length1,0321,137
definitionB6Ng01-195G05.b B6Ng01-195G05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,192,321 - 26,192,866)(26,065,291 - 26,066,427)
sequence
gaattcacattataaactaaaacatttctattataataaacaaatgcatg
atttagttaacaactgtacattgcagatgtttgagctgggaagtcttaga
gtcttttctttgctttcaggttgatttaagtttttttcagataatggaat
attttctaagattctgtatactcagtctccaagactagaagctcacaatc
cccaccttggtgacaggtaggtgaattattagaaaggacccatcattcac
tagaaagtgtcaatggaatgaaatctaatgttcatccttttactttgttt
ttctttgtgagcaaattgtcttattatgtagcctgagatatcctcagtgt
tataattctcctggagtagtctcccaagtgttgacaccagaagaatcaaa
tgaaaaagtccccccttccatctgtgctctggagtaaggctgtcccacag
cccaccttacccaaatcccatcaggagagagctggtctccaggaatgttc
tcactcctaagcccagaggtcagatcatcaattttgttccaataacttcc
caaagagggaccccactcagagcacacagggcacaggaacagctggggac
ctggggacaggatccttccagtctccatcggataagggtgccctccataa
ccaaatccctcacaggagagagctggtctccttaagagtactgacaaacc
taagatcacaggctcacaggcccaaaggagggacaagctccagtcagaaa
cagcaagaccaacaaccagaggtaaccagatagtagcagcaagtgcaaga
aactaagcaacagaaaccaaggctatgcggtatcatcaaaacccaattct
cccaccatagcaagtcctagatgccccaacacaacagaaaagcaagattc
agattttaaatcacatctgatgataatgatgatggaggactttaagaaga
acataataactccctttaaagaaatacaggagacacagtaaacaggtaga
agcctttaaagagaaacacgaaaatcctaaga

gaattcagaggaaatttccaaagttagcagagaattagacaggtctgaag
ttaaaggtttggtcgtctgtgtgcaaatgtgactttccctacagggcaat
gagctccttactgggcacttagacttgcactagaggccagggcagcagca
agtgagaggaactgtttcacagtcttcgtctaagagcagctaggtttatg
aaaagaagagatgtggtttaccttaaaaaaaggcgtgggagctgtaatga
cactgcatagagcccaaagcaatgtttaatcagatacaagtgttggaatt
ctgaccatcagtcttcagccattaggttcatcctcatggatggaatatgc
catgatggtgcaaggaccccaaggcagagttcgtagtgtgagagttgcct
tggtcacagtgtctgttcacagcagtaaaatcttaactaaaatatcctcc
caacaaaagagcagtaaagttctggaagtaactagtaaacgttctaggtt
acgttggaaggaagaaaacaataaaaacctagaacaaaccaaatggaagg
ccagaaaatcttggcttgagattgggacagaagttagaaagaaagatgac
ttatttcttaaaatctagatgtgggtgtttctagacacttgaaagggaag
aaaccacatggcagcttgtagcacagaagagtgactaaaagatgaggcag
aaaccaactcaaaggttgtgaggattccttaaggggctctgaaggatgct
ggtgttagttagtgaccagtaagagtgttatggaacatgtgagtcacaaa
gctcaagtgcatcttccccaagatgtggaccttgggaagccagagtctgg
gagtataaaaggagatgggaatgcaccaggcctactgatgcttatttgac
ctagaggtggtcctctcgtgtgatgattctaggcctcagctctgcactct
gtagtgggatacaggagctatagtcccttatctttaccctgagcactccc
agtggagggttgatccatggaaaggacttctcattgctttctacagctct
ttggatggatgtagaggaaacctatgtattgcattctgcaagcctgtagc
cagccccgttctatgattatagacatgtttgtatgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_26192321_26192866
seq2: B6Ng01-195G05.b_42_587 (reverse)

seq1  GTTATTGGAACAAAATTGATGATCTGACCTCTGGGCTTAGGAGTGAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGGAACAAAATTGATGATCTGACCTCTGGGCTTAGGAGTGAGAAC  50

seq1  ATTCCTGGAGACCAGCTCTCTCCTGATGGGATTTGGGTAAGGTGGGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGGAGACCAGCTCTCTCCTGATGGGATTTGGGTAAGGTGGGCTGT  100

seq1  GGGACAGCCTTACTCCAGAGCACAGATGGAAGGGGGGACTTTTTCATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAGCCTTACTCCAGAGCACAGATGGAAGGGGGGACTTTTTCATTTG  150

seq1  ATTCTTCTGGTGTCAACACTTGGGAGACTACTCCAGGAGAATTATAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTGGTGTCAACACTTGGGAGACTACTCCAGGAGAATTATAACAC  200

seq1  TGAGGATATCTCAGGCTACATAATAAGACAATTTGCTCACAAAGAAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATATCTCAGGCTACATAATAAGACAATTTGCTCACAAAGAAAAAC  250

seq1  AAAGTAAAAGGATGAACATTAGATTTCATTCCATTGACACTTTCTAGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAAAGGATGAACATTAGATTTCATTCCATTGACACTTTCTAGTGA  300

seq1  ATGATGGGTCCTTTCTAATAATTCACCTACCTGTCACCAAGGTGGGGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGGTCCTTTCTAATAATTCACCTACCTGTCACCAAGGTGGGGATT  350

seq1  GTGAGCTTCTAGTCTTGGAGACTGAGTATACAGAATCTTAGAAAATATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTTCTAGTCTTGGAGACTGAGTATACAGAATCTTAGAAAATATTC  400

seq1  CATTATCTGAAAAAAACTTAAATCAACCTGAAAGCAAAGAAAAGACTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCTGAAAAAAACTTAAATCAACCTGAAAGCAAAGAAAAGACTCTA  450

seq1  AGACTTCCCAGCTCAAACATCTGCAATGTACAGTTGTTAACTAAATCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCCCAGCTCAAACATCTGCAATGTACAGTTGTTAACTAAATCATG  500

seq1  CATTTGTTTATTATAATAGAAATGTTTTAGTTTATAATGTGAATTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTTTATTATAATAGAAATGTTTTAGTTTATAATGTGAATTC  546


seq1: chr18_26065291_26066427
seq2: B6Ng01-195G05.g_67_1203

seq1  GAATTCAGAGGAAATTTCCAAAGTTAGCAGAGAATTAGACAGGTCTGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGGAAATTTCCAAAGTTAGCAGAGAATTAGACAGGTCTGAAG  50

seq1  TTAAAGGTTTGGTCGTCTGTGTGCAAATGTGACTTTCCCTACAGGGCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGTTTGGTCGTCTGTGTGCAAATGTGACTTTCCCTACAGGGCAAT  100

seq1  GAGCTCCTTACTGGGCACTTAGACTTGCACTAGAGGCCAGGGCAGCAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCTTACTGGGCACTTAGACTTGCACTAGAGGCCAGGGCAGCAGCA  150

seq1  AGTGAGAGGAACTGTTTCACAGTCTTCGTCTAAGAGCAGCTAGGTTTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGAGGAACTGTTTCACAGTCTTCGTCTAAGAGCAGCTAGGTTTATG  200

seq1  AAAAGAAGAGATGTGGTTTACCTTAAAAAAAGGCGTGGGAGCTGTAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAGAGATGTGGTTTACCTTAAAAAAAGGCGTGGGAGCTGTAATGA  250

seq1  CACTGCATAGAGCCCAAAGCAATGTTTAATCAGATACAAGTGTTGGAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCATAGAGCCCAAAGCAATGTTTAATCAGATACAAGTGTTGGAATT  300

seq1  CTGACCATCAGTCTTCAGCCATTAGGTTCATCCTCATGGATGGAATATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCATCAGTCTTCAGCCATTAGGTTCATCCTCATGGATGGAATATGC  350

seq1  CATGATGGTGCAAGGACCCCAAGGCAGAGTTCGTAGTGTGAGAGTTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGGTGCAAGGACCCCAAGGCAGAGTTCGTAGTGTGAGAGTTGCCT  400

seq1  TGGTCACAGTGTCTGTTCACAGCAGTAAAATCTTAACTAAAATATCCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACAGTGTCTGTTCACAGCAGTAAAATCTTAACTAAAATATCCTCC  450

seq1  CAACAAAAGAGCAGTAAAGTTCTGGAAGTAACTAGTAAACGTTCTAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAAGAGCAGTAAAGTTCTGGAAGTAACTAGTAAACGTTCTAGGTT  500

seq1  ACGTTGGAAGGAAGAAAACAATAAAAACCTAGAACAAACCAAATGGAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTGGAAGGAAGAAAACAATAAAAACCTAGAACAAACCAAATGGAAGG  550

seq1  CCAGAAAATCTTGGCTTGAGATTGGGACAGAAGTTAGAAAGAAAGATGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAATCTTGGCTTGAGATTGGGACAGAAGTTAGAAAGAAAGATGAC  600

seq1  TTATTTCTTAAAATCTAGATGTGGGTGTTTCTAGACACTTGAAAGGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTTAAAATCTAGATGTGGGTGTTTCTAGACACTTGAAAGGGAAG  650

seq1  AAACCACATGGCAGCTTGTAGCACAGAAGAGTGACTAAAAGATGAGGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACATGGCAGCTTGTAGCACAGAAGAGTGACTAAAAGATGAGGCAG  700

seq1  AAACCAACTCAAAGGTTGTGAGGATTCCTTAAGGGGCTCTGAAGGATGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAACTCAAAGGTTGTGAGGATTCCTTAAGGGGCTCTGAAGGATGCT  750

seq1  GGTGTTAGTTAGTGACCAGTAAGAGTGTTATGGAACATGTGAGTCACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTAGTTAGTGACCAGTAAGAGTGTTATGGAACATGTGAGTCACAAA  800

seq1  GCTCAAGTGCATCTTCCCCAAGATGTGGACCTTGGGAAGCCAGAGTCT-G  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCTCAAGTGCATCTTCCCCAAGATGTGGACCTTGGGAAGCCAGAGTCTGG  850

seq1  GAGTATAAAAGGAGATGGGAATGCACCAGGCCTACTGATGCTTTATTTGA  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GAGTATAAAAGGAGATGGGAATGCACCAGGCCTACTGATGC-TTATTTGA  899

seq1  CCTAGAGGTGGTCCTCTCGTGTGATGATTCTAGGCCCTCAGCTCTGCACT  949
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCTAGAGGTGGTCCTCTCGTGTGATGATTCTAGG-CCTCAGCTCTGCACT  948

seq1  CTGTAGTGGGATACAGGGAGCTATAGT-CCTTATCTTTACCCTGAGCACT  998
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  CTGTAGTGGGATACA-GGAGCTATAGTCCCTTATCTTTACCCTGAGCACT  997

seq1  CCCAGT-GAGGGTTGATCCATGGAAAGAACTTCTCATTGCTTTCTACAGC  1047
      |||||| |||||||||||||||||||| ||||||||||||||||||||||
seq2  CCCAGTGGAGGGTTGATCCATGGAAAGGACTTCTCATTGCTTTCTACAGC  1047

seq1  TCTTT-GATGGATGTTAGAAGGAAACTATGTA-TGCATTCTGCAGAGCCC  1095
      ||||| |||||||| |||| | || ||||||| ||||||||||| || ||
seq2  TCTTTGGATGGATG-TAGAGGAAACCTATGTATTGCATTCTGCA-AG-CC  1094

seq1  TGTAAGCCAGCCCC-TTCTATGATCTAATAGACATG---ATATGGA  1137
      ||| |||||||||| ||||||||  | |||||||||    ||||||
seq2  TGT-AGCCAGCCCCGTTCTATGA--TTATAGACATGTTTGTATGGA  1137


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