BAC Information

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BAC

Clone NameB6Ng01-217D23
Chromosome18 (Build37)
Map Location 63,968,114 - 64,065,116
singlet/doubletdoublet
Overlap geneWdr7
Upstream geneApcdd1, Napg, 9430028L06Rik, 9030411M15Rik, LOC627792, Txnl1
Downstream geneLOC629436, LOC667773, St8sia3, LOC433193, Onecut2, LOC667783, LOC100043304, Fech, Nars, Atp8b1, LOC629480
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217D23.bB6Ng01-217D23.g
ACCGA033712GA033713
length1,17450
definitionB6Ng01-217D23.b B6Ng01-217D23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,063,955 - 64,065,116)(63,968,114 - 63,968,163)
sequence
gaattcagttaaaatataaaataacacagtgaagcacgctaccacatgga
tggactctgtaagagggattaagtgaaagaagtcaaccataaaacaccac
aggatgcaaggctccatttcggtgaactatttaggacaggaaaatttaaa
aaaggacgcagtgtttcctaaagcgtgcagacagtggcacggggagaaac
tgcttaatagacacgggtgtctccctggggttagcactattgggaacgag
gtggctgtgatggttgtgcactgccagtttacttgtggtgataatcacca
attgtaggccgcttggataagacacccaagagaggcaagggtttctggaa
tcaagagactgggtttcagacagtaccaatgtccatctttagtaccatag
ctcctaaccagttcacaaagacctgttccacttatgtcaggttagcaact
cttccaggttacttttttgtctttattttaataatgatgattatagtgta
tttaaaatgcaattgatttcatttactgtctgtgcatgtgcatgtgggtg
tgagtgtgcacacacacacacacacacacacacacacacacacacaccag
agcatcagtgtaggtcagaggacaacttgcaggagttggtttttttcttc
caccatgtggggcctagggattgaacttagatcatcagtcaggcttcgtg
gcagccacctttgcctgctgagccatcctaccgtcccaactacaatcttc
atttaacctgtcactgagtatatgcaaaagaaactccaataaagttaatt
taaacattaacaggaatttcccaaattttctagctccaccttctcttagt
aaaacatttttgatctagtaccaagtatgtatatcattttccttttaaac
agttttgcttatacaatttatttatcagtaatgtcaaggtattattttat
caaggtattattaaacacagttttgaaaattatatcacagaccatttcac
tcaaggctacatctcagtttctaatgagttttgtatttgtttttgctttt
gagacaggatatcactctctagccctgtttggctttgaactcaccaaata
tccatcctgctggcattctggacctggagtgctacaggcaatggccactg
ttaaccagtacagttactgctgat
tttttttatactttaaaccttaattgtgggtgggtgggtgggtgggggtg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_64063955_64065116
seq2: B6Ng01-217D23.b_48_1221 (reverse)

seq1  ATCAGCAGTAAACTG-ACTGGGT-ACAGTGGCCA-TGCTTGTAGC-CACA  46
      ||||||||| ||||| ||||| | |||||||||| ||| |||||| | | 
seq2  ATCAGCAGT-AACTGTACTGGTTAACAGTGGCCATTGCCTGTAGCACTCC  49

seq1  AG--TCAGGATGCCAAGGCAGGAGGATTATT--GTGAGTTCAAAGCCAAA  92
      ||   ||| ||||||  |||||| |  ||||  |||||||||||||||||
seq2  AGGTCCAGAATGCCA--GCAGGATGGATATTTGGTGAGTTCAAAGCCAAA  97

seq1  CAGGGCTAGAGAGTGATACCCTGTCTCAAAAGCAAAAAC-AATACAAAAC  141
      |||||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  CAGGGCTAGAGAGTGATATCCTGTCTCAAAAGCAAAAACAAATACAAAAC  147

seq1  TCAATAGAAAACTGAGATGTAGCCTTGAGTG-AATGGTCTGTGATATAAT  190
      ||| ||| ||||||||||||||||||||||| ||||||||||||||||||
seq2  TCATTAG-AAACTGAGATGTAGCCTTGAGTGAAATGGTCTGTGATATAAT  196

seq1  TTTC-AAACTGTGTTT-ATTATACCTTGAT-AAATTATACCTTGACATTA  237
      |||| ||||||||||| || |||||||||| |||| ||||||||||||||
seq2  TTTCAAAACTGTGTTTAATAATACCTTGATAAAATAATACCTTGACATTA  246

seq1  CTGATAAAT-AATTGTATAAGC-AAACTGTTT-AAAGGAAAATGATATAC  284
      ||||||||| |||||||||||| ||||||||| |||||||||||||||||
seq2  CTGATAAATAAATTGTATAAGCAAAACTGTTTAAAAGGAAAATGATATAC  296

seq1  ATACTTGGTACTAGATCAAAAATGTTTTACTAAGAGAAGGTGGAGCTAGA  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTGGTACTAGATCAAAAATGTTTTACTAAGAGAAGGTGGAGCTAGA  346

seq1  AAATTTGGGAAATTCCTGTTAATGTTTAAATTAACTTTATTGGAGTTTCT  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGGGAAATTCCTGTTAATGTTTAAATTAACTTTATTGGAGTTTCT  396

seq1  TTTGCATATACTCAGTGACAGGTTAAATGAAGATTGTAGTTGGGACGGTA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATATACTCAGTGACAGGTTAAATGAAGATTGTAGTTGGGACGGTA  446

seq1  GGATGGCTCAGCAGGCAAAGGTGGCTGCCACGAAGCCTGACTGATGATCT  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCTCAGCAGGCAAAGGTGGCTGCCACGAAGCCTGACTGATGATCT  496

seq1  AAGTTCAATCCCTAGGCCCCACATGGTGGAAGAAAAAAACCAACTCCTGC  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAATCCCTAGGCCCCACATGGTGGAAGAAAAAAACCAACTCCTGC  546

seq1  AAGTTGTCCTCTGACCTACACTGATGCTCTGGTGTGTGTGTGTGTGTGTG  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTCCTCTGACCTACACTGATGCTCTGGTGTGTGTGTGTGTGTGTG  596

seq1  TGTGTGTGTGTGTGTGTGTGCACACTCACACCCACATGCACATGCACAGA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGCACACTCACACCCACATGCACATGCACAGA  646

seq1  CAGTAAATGAAATCAATTGCATTTTAAATACACTATAATCATCATTATTA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAATGAAATCAATTGCATTTTAAATACACTATAATCATCATTATTA  696

seq1  AAATAAAGACAAAAAAGTAACCTGGAAGAGTTGCTAACCTGACATAAGTG  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGACAAAAAAGTAACCTGGAAGAGTTGCTAACCTGACATAAGTG  746

seq1  GAACAGGTCTTTGTGAACTGGTTAGGAGCTATGGTACTAAAGATGGACAT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGGTCTTTGTGAACTGGTTAGGAGCTATGGTACTAAAGATGGACAT  796

seq1  TGGTACTGTCTGAAACCCAGTCTCTTGATTCCAGAAACCCTTGCCTCTCT  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACTGTCTGAAACCCAGTCTCTTGATTCCAGAAACCCTTGCCTCTCT  846

seq1  TGGGTGTCTTATCCAAGCGGCCTACAATTGGTGATTATCACCACAAGTAA  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTCTTATCCAAGCGGCCTACAATTGGTGATTATCACCACAAGTAA  896

seq1  ACTGGCAGTGCACAACCATCACAGCCACCTCGTTCCCAATAGTGCTAACC  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCAGTGCACAACCATCACAGCCACCTCGTTCCCAATAGTGCTAACC  946

seq1  CCAGGGAGACACCCGTGTCTATTAAGCAGTTTCTCCCCGTGCCACTGTCT  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGAGACACCCGTGTCTATTAAGCAGTTTCTCCCCGTGCCACTGTCT  996

seq1  GCACGCTTTAGGAAACACTGCGTCCTTTTTTAAATTTTCCTGTCCTAAAT  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGCTTTAGGAAACACTGCGTCCTTTTTTAAATTTTCCTGTCCTAAAT  1046

seq1  AGTTCACCGAAATGGAGCCTTGCATCCTGTGGTGTTTTATGGTTGACTTC  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCACCGAAATGGAGCCTTGCATCCTGTGGTGTTTTATGGTTGACTTC  1096

seq1  TTTCACTTAATCCCTCTTACAGAGTCCATCCATGTGGTAGCGTGCTTCAC  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTAATCCCTCTTACAGAGTCCATCCATGTGGTAGCGTGCTTCAC  1146

seq1  TGTGTTATTTTATATTTTAACTGAATTC  1162
      ||||||||||||||||||||||||||||
seq2  TGTGTTATTTTATATTTTAACTGAATTC  1174

seq1: chr18_63968114_63968163
seq2: B6Ng01-217D23.g_71_120

seq1  TTTTTTTATACTTTAAACCTTAATTGTGGGTGGGTGGGTGGGTGGGGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATACTTTAAACCTTAATTGTGGGTGGGTGGGTGGGTGGGGGTG  50