BAC Information

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BAC

Clone NameB6Ng01-217O15
Chromosome18 (Build37)
Map Location 6,262,661 - 6,263,557
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp438, LOC100039442, Zeb1, EG664925, Arhgap12, Kif5b, LOC100039469
Downstream geneEG621100, LOC665028, EG622152, Epc1, LOC665047, 4921524L21Rik, LOC100039583, EG665053, Rab18, LOC620787, LOC100039635, Mkx, LOC664778, Armc4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217O15.bB6Ng01-217O15.g
ACCGA034181GA034182
length1,219972
definitionB6Ng01-217O15.b B6Ng01-217O15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgccctttatatccctcacagagcgacactggtcggctctatga
taacccttgccacacttagagcaaagagtgagagtccctccctgtttatc
tggagctctgcaatctttcttaaaatgcccaggctttccgcagttaaaac
atgtcctctgattatttctgcccatggagcggttctgagattggaggatg
gcggccgctaagcctgcattggtgagaggtcccccaagctctcgacagac
cctgagccagtcttgtaagcctttgttctttcttggggctatggccgctc
ggcactcctttgtggcttgctcatagattagctgttctatcagaggcgca
gcttgctctgaatctccaaaaatacgctctgctgcctctgtcattctggc
cacaaaatctgagaaggattcctgaggtccctggattatctttgttaact
gcccagtggtttcacctgctcgagagagcgccttccaggccctaatagcc
gtggaagaaatctgggcataagctccccaatggtagtttgtctgatcagc
agaataagctccctgacccgttaacaagtcaaaagtccaatctctctgct
ctggagtcaaagcagctgcgtttgctcgggcctgcgcttgtgcagtttca
tgccaaagagctctccattccatatatttgcccatactagggagagcggc
ttttacaaccatttgccagtcagcaggagttagtgccatgccggcgagcc
tgtctaactgcaccaaggtaaaattagcattggttccgtatttacggacc
gactcagcaatttctttattttgtaagtattctaccggagcgtggacacg
cccaccctcggctccttcaaagaccggaaatgcctgttgtatttttcctt
tgttcctctctgggaatgaatgagtctgcgcactgcctctctgcgcactg
cctcttttgcgcattgctgacgcactacgcaggcggggactcgcataggg
cgaccttgagcgactgccctgaggcatcagcaaactggcctcgcagccgc
tttgctttttctgaccaatagctgctgtatgggctgcttctctctcagac
tgtttcctcaaaggaagattcttcactgctccgactactaagcgtgctct
gacctactaggtgacagtattcttagaactcgctaatgagctatactcac
ttgtcccatgtatgtatac
gaattcatgcagttgaatccttctcaacagtctgtgttgtgggaacactt
cattaccaccgttccccagctaaagagttctgaattcacgcagttgaatc
cttctcaacagtctgttttacgggaaccttcattaccataacccgcagtt
ctggttccggaatgagggatcttccttgcgccggtgatggtagtttccgt
cccgggttttctcctcccgggtttcggcaccaactcttacacacgttctc
acgaccagccaggaaagacacaacaaaccagaatcttctgcggcaaaact
ttattgcttacatcttcaggagcaagagtgcaaaactcaaacccaaaaac
gaaagcgaaaccccgtccctatttaggagagttatccttcgcctaggacg
tatcactccctgattggctgcagcccatggccgagttgttgccacgggga
aggcagagtacatggggtggagaaatacccttggcacatgcgcagattat
ttgtttaccacttagaacacagctgtcagcgccatcttgtaacggcgaat
gtgggggcggcttcccacaattctgttttgaggattccttccctggagag
atgtaaacagcatatacctccttataaggtcccaaccataaagcaagagt
gtgatttccactgaagttgactctgggaaccaataagattattgggctga
ctaatagaaatgtgtggggttgcttacaggagtgtggttgacctaaagct
gcccttactagaagtttcacctgaagtggatgatagtgcctctgtggctg
catagatagaagcccccttctattcatgtttcccaagctatgcactctaa
catgtcctgagacaccaaagcctttgtgacttaagcccacattgcatgca
aagtgtcttggaagaaaacacattcaattctgataggccaataaccctat
gtggccctcccgtagaggagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_6262661_6263557
seq2: B6Ng01-217O15.g_142_1042

seq1  AAAGAGTTCTGAATTCACGCAGTTGAATCCTTCTCAACAGTCTGTTTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTTCTGAATTCACGCAGTTGAATCCTTCTCAACAGTCTGTTTTAC  50

seq1  GGGAACCTTCATTACCATAACCCGCAGTTCTGGTTCCGGAATGAGGGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACCTTCATTACCATAACCCGCAGTTCTGGTTCCGGAATGAGGGATC  100

seq1  TTCCTTGCGCCGGTGATGGTAGTTTCCGTCCCGGGTTTTCTCCTCCCGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGCGCCGGTGATGGTAGTTTCCGTCCCGGGTTTTCTCCTCCCGGG  150

seq1  TTTCGGCACCAACTCTTACACACGTTCTCACGACCAGCCAGGAAAGACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGGCACCAACTCTTACACACGTTCTCACGACCAGCCAGGAAAGACAC  200

seq1  AACAAACCAGAATCTTCTGCGGCAAAACTTTATTGCTTACATCTTCAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACCAGAATCTTCTGCGGCAAAACTTTATTGCTTACATCTTCAGGA  250

seq1  GCAAGAGTGCAAAACTCAAACCCAAAAACGAAAGCGAAACCCCGTCCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAGTGCAAAACTCAAACCCAAAAACGAAAGCGAAACCCCGTCCCTA  300

seq1  TTTAGGAGAGTTATCCTTCGCCTAGGACGTATCACTCCCTGATTGGCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAGAGTTATCCTTCGCCTAGGACGTATCACTCCCTGATTGGCTGC  350

seq1  AGCCCATGGCCGAGTTGTTGCCACGGGGAAGGCAGAGTACATGGGGTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCATGGCCGAGTTGTTGCCACGGGGAAGGCAGAGTACATGGGGTGGA  400

seq1  GAAATACCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACA  450

seq1  GCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGGGCGGCTTCCCACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGGGCGGCTTCCCACAAT  500

seq1  TCTGTTTTGAGGATTCCTTCCCTGGAGAGATGTAAACAGCATATACCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTGAGGATTCCTTCCCTGGAGAGATGTAAACAGCATATACCTCC  550

seq1  TTATAAGGTCCCAACCATAAAGC-AGAGTGTGA-TTCCACTGAAGTTGAC  598
      ||||||||||||||||||||||| ||||||||| ||||||||||||||||
seq2  TTATAAGGTCCCAACCATAAAGCAAGAGTGTGATTTCCACTGAAGTTGAC  600

seq1  TCTGGGAACCAATAAGATTATTGGGCTGACTAATAGAAATGTGTGGGGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGAACCAATAAGATTATTGGGCTGACTAATAGAAATGTGTGGGGTT  650

seq1  GCTTACAGGAGTGTGGGTGACCCTAAAGCTG-CCTTACTAGAAGTTTTCA  697
      |||||||||||||||| ||| |||||||||| |||||||||||| |||||
seq2  GCTTACAGGAGTGTGGTTGA-CCTAAAGCTGCCCTTACTAGAAG-TTTCA  698

seq1  CCTGGAGTGGATGATAGTGCTCCTGTGGCTGCATAGATAG-AGCCCCCTT  746
      |||| |||||||||||||||  |||||||||||||||||| |||||||||
seq2  CCTGAAGTGGATGATAGTGCCTCTGTGGCTGCATAGATAGAAGCCCCCTT  748

seq1  CTA-TCATGTTCCCCAAGCCTATGCACTCTAACATGTCCTGAGACACCAA  795
      ||| ||||||| |||||| |||||||||||||||||||||||||||||||
seq2  CTATTCATGTTTCCCAAG-CTATGCACTCTAACATGTCCTGAGACACCAA  797

seq1  AGCCATATGTGAC-TAAGCCACAATTGCATGC-AAGTGTCTGGGA--GAA  841
      |||| | |||||| ||||||   ||||||||| |||||||| |||   ||
seq2  AGCC-TTTGTGACTTAAGCCCACATTGCATGCAAAGTGTCTTGGAAGAAA  846

seq1  ACAATTGGAATTTCTGATAGGTCAAATAACCCTATGTGCCCCTTCACT-G  890
      |||  |  || |||||||||| | |||||||||||||| |||| |  | |
seq2  ACACATTCAA-TTCTGATAGG-CCAATAACCCTATGTGGCCCTCCCGTAG  894

seq1  AGGAGAC  897
      |||||||
seq2  AGGAGAC  901