BAC Information

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BAC

Clone NameB6Ng01-219A07
Chromosome18 (Build37)
Map Location 68,429,863 - 68,430,946
singlet/doubletsinglet
Overlap gene4933403F05Rik
Upstream geneImpa2, B430212C06Rik, Cidea, Tubb6, Afg3l2, Slmo1, Spire1, Cep76, Tnfsf5ip1, Ptpn2, Seh1l, LOC667939, D18Ertd653e
Downstream geneRnmt, Mc5r, Mc2r, LOC100043380, EG225681
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219A07.bB6Ng01-219A07.g
ACCGA034983GA034984
length1,0181,086
definitionB6Ng01-219A07.b B6Ng01-219A07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccatttttaatggggttattcgattt
tctggagcccaccttcttgagttctttatatatattggatattagtcccc
tatccgatttgggataggtaaagatcctttcccaatctgtcggtggtctt
tttgtcttattgacggtgtctcttgccttgcagaagctttgcaattttat
gaggtcccatttatcgattctcgatcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtgcccatatctttgaggcttttccctact
ttctcctctataagtttcagtgtctctggttttatgtggagttccttaat
ccacttagatttgaccttagtacaaggagataggaatgggtcaattctca
ttcttctacataataactgccagttgtgccagcaccatttgttgaaaatg
ctgtcttttttccactggatggttttagctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatctctgggtcttcaattctgttccattggt
ctacttgtctgtcactataccagtaccatgcagtttttatcacaattgct
ctgtagtacagctttaggtcaggcatggtgattccaccagaggttatttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atctaccgattgccctttctaattcgttgaagaattgagttggaattttg
atggggattacattgaatctgtagattgcttttggtgtcagttttaagga
agagatagatatatggtgtgtttctttttggtttagaacaaacacttgat
ggtgtgaggaaagatggcttgaaaggctaccaactgcatctctgcctgtc
atcaagacaccagttccctgaaagctgaagggaacatcttctgcacagct
aaacaaaggattcttaggcaccccacttgttacatcttcctctcctttga
ctaccggcttgcgatcag
gaattcttcatttccatactgagcccctttcctgaattctaatgctgcat
agccactactttcctcacttgcatatctgaatccacattaaaacttagtc
agagcaaatccattgacctcagctgtcccggtcagtcctgcttcttccaa
aattttactcagaacagggaatggaaactttgttcttctagctgctcagg
ccaaaatgattagctcttaatgtgttcctttaacataattggcatgcata
tcattaagactgcatatcattatttcttgaaaccatattcactgtccttt
cctctgcctctcctgagagtactagggtgctgaacatgcgaaggcctagg
cttcagtgacaaacagccttctcagaggcttttgtttttacgtggcccta
atgagaaaggttctcaacacagcagctgtggtgattttgcttaaagtcac
cccatagcttttcaagccttgcagacgaccgttctgcctcctgctcattc
cgtcctgcacagccatctagcacccagcccccggcagtcctggctgggaa
cacagcctcccctgctccctgccctgccccccactcccatcctgccccca
aagagatcaatctgctaactgcttaaagcacctcccatctaaatttgcaa
tcttgggtagggtgaggggaaagggacaggatggacaaaaacaaaaaaac
aacccaaaataacacacatcaaaatacctctttatatggcttttctttca
aaatatattaatatattttaaaatatttatcttatgtgcatgagtctttt
acctgcacatatacatgtatgtgcactgcctgtgagcctggtgctgactg
acagaaagtcaaaggtgtcattggaccctccagaaccaaaggtacagata
gtgcaagcacttaactatactctctctttaacatttagtatcatttaaaa
tgcgtacattatatgtggtgtgtgtgtgtatttacccttccacttctgct
cttcccactgtccttccttcctccctcctagatacatgcctttatatggg
gggttccttgggtagtgttttattttccttcccgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_68429863_68430946
seq2: B6Ng01-219A07.g_67_1152

seq1  GAATTCTTCATTTCCATACTGAGCCCCTTTCCTGAATTCTAATGCTGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATTTCCATACTGAGCCCCTTTCCTGAATTCTAATGCTGCAT  50

seq1  AGCCACTACTTTCCTCACTTGCATATCTGAATCCACATTAAAACTTAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACTACTTTCCTCACTTGCATATCTGAATCCACATTAAAACTTAGTC  100

seq1  AGAGCAAATCCATTGACCTCAGCTGTCCCGGTCAGTCCTGCTTCTTCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAATCCATTGACCTCAGCTGTCCCGGTCAGTCCTGCTTCTTCCAA  150

seq1  AATTTTACTCAGAACAGGGAATGGAAACTTTGTTCTTCTAGCTGCTCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTACTCAGAACAGGGAATGGAAACTTTGTTCTTCTAGCTGCTCAGG  200

seq1  CCAAAATGATTAGCTCTTAATGTGTTCCTTTAACATAATTGGCATGCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATGATTAGCTCTTAATGTGTTCCTTTAACATAATTGGCATGCATA  250

seq1  TCATTAAGACTGCATATCATTATTTCTTGAAACCATATTCACTGTCCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAGACTGCATATCATTATTTCTTGAAACCATATTCACTGTCCTTT  300

seq1  CCTCTGCCTCTCCTGAGAGTACTAGGGTGCTGAACATGCGAAGGCCTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTCTCCTGAGAGTACTAGGGTGCTGAACATGCGAAGGCCTAGG  350

seq1  CTTCAGTGACAAACAGCCTTCTCAGAGGCTTTTGTTTTTACGTGGCCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTGACAAACAGCCTTCTCAGAGGCTTTTGTTTTTACGTGGCCCTA  400

seq1  ATGAGAAAGGTTCTCAACACAGCAGCTGTGGTGATTTTGCTTAAAGTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAAGGTTCTCAACACAGCAGCTGTGGTGATTTTGCTTAAAGTCAC  450

seq1  CCCATAGCTTTTCAAGCCTTGCAGACGACCGTTCTGCCTCCTGCTCATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAGCTTTTCAAGCCTTGCAGACGACCGTTCTGCCTCCTGCTCATTC  500

seq1  CGTCCTGCACAGCCATCTAGCACCCAGCCCCCGGCAGTCCTGGCTGGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCTGCACAGCCATCTAGCACCCAGCCCCCGGCAGTCCTGGCTGGGAA  550

seq1  CACAGCCTCCCCTGCTCCCTGCCCTGCCCCCCACTCCCATCCTGCCCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCTCCCCTGCTCCCTGCCCTGCCCCCCACTCCCATCCTGCCCCCA  600

seq1  AAGAGATCAATCTGCTAACTGCTTAAAGCACCTCCCATCTAAATTTGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATCAATCTGCTAACTGCTTAAAGCACCTCCCATCTAAATTTGCAA  650

seq1  TCTTGGGTAGGGTGAGGGGAAAGGGACAGGATGGACAAAAACAAAAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGTAGGGTGAGGGGAAAGGGACAGGATGGACAAAAACAAAAAAAC  700

seq1  AACCCAAAATAACACACATCAAAATACCTCTTTATATGGCTTTTCTTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAAAATAACACACATCAAAATACCTCTTTATATGGCTTTTCTTTCA  750

seq1  AAATATATTAATATATTTTAAAATATTTATCTTATGTGCATGAGTCTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATTAATATATTTTAAAATATTTATCTTATGTGCATGAGTCTTTT  800

seq1  ACCTGCACATATACATGTATGTGCACTGCCTGTGAGCCTGGTGCTGACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCACATATACATGTATGTGCACTGCCTGTGAGCCTGGTGCTGACTG  850

seq1  ACAG-AAGTCAAAGGTGTCATTGGACCCTCCAGAACCAAAGGTACAGATA  899
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGTCAAAGGTGTCATTGGACCCTCCAGAACCAAAGGTACAGATA  900

seq1  GTGCAAGCACTTAACTATACTCTCTC-TTAACATTTAGTATCATTTAAAA  948
      |||||||||||||||||||||||||| ||||||||||||||||||| |||
seq2  GTGCAAGCACTTAACTATACTCTCTCTTTAACATTTAGTATCATTT-AAA  949

seq1  ATGCGTACATTATATGT-GTGTGTGTGTGTATTTAACCCCTCCACTTCTG  997
      ||||||||||||||||| |||||||||||||||| |||| ||||||||||
seq2  ATGCGTACATTATATGTGGTGTGTGTGTGTATTT-ACCCTTCCACTTCTG  998

seq1  CCTCTCCCACTGTCCTTTCCCTTCCTCCCTCCCTAGGATACATG-CTTTA  1046
      |   |||||||||||||  ||||||||||| |||| |||||||| |||||
seq2  CTCTTCCCACTGTCCTT--CCTTCCTCCCT-CCTA-GATACATGCCTTTA  1044

seq1  TAT-GGGGGTTC--TTGGTAGTGTTTTATTTT-CTTCCCGAA  1084
      ||| ||||||||  | |||||||||||||||| |||||||||
seq2  TATGGGGGGTTCCTTGGGTAGTGTTTTATTTTCCTTCCCGAA  1086