MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-226J15
Chromosome	18 (Build37)	6 (Build37)
Map Location	75,176,119 - 75,176,264	34,961,740 - 34,962,840
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	Mapk4, 2810433K01Rik, Cxxc1, EG435570, Mbd1, Ccdc11, LOC628298, LOC668124, LOC668126, Myo5b, Acaa2, LOC672799, Lipg, Rpl17, BC031181
Downstream gene	Dym, LOC628356, EG667777, Smad7, Gm672, Zbtb7c
Link	Open Mouse BAC browser

Click to get alignment info.

name	Mapk4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225724 MGI:2444559
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2810433K01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66468 MGI:1913718
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cxxc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74322 MGI:1921572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG435570 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435570 MGI:3644035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Mbd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17190 MGI:1333811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74453 MGI:1921703
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC628298 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628298
definition	note : fatty acid-binding protein, epidermal pseudogene pseudo : _no_value

name	LOC668124 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668124
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC668126 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668126
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Myo5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17919 MGI:106598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acaa2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52538 MGI:1098623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC672799 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672799
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Lipg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16891 MGI:1341803
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319195 MGI:2448270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC031181 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:407819 MGI:3039614
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dym (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69190 MGI:1918480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC628356 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628356
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG667777 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667777 MGI:3643510
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 ESTs, 15 Proteins pseudo : _no_value

name	Smad7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17131 MGI:1100518
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm672 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269037 MGI:2685518
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zbtb7c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207259 MGI:2443302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mapk4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89337267 GeneID:225724 MGI:2444559
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen-activated protein kinase 4 transcript_id : NM_172632.2

name	2810433K01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367006 GeneID:66468 MGI:1913718
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810433K01 gene transcript_id : NM_025581.3

name	Cxxc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803577 GeneID:74322 MGI:1921572
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CXXC finger 1 (PHD domain) transcript_id : NM_028868.2

name	Mbd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305258 GeneID:17190 MGI:1333811
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methyl-CpG binding domain protein 1 transcript_id : NM_013594.1

name	Ccdc11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116812880 GeneID:74453 MGI:1921703
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 11 transcript_id : NM_028948.1

name	Myo5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:95113659 GeneID:17919 MGI:106598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin Vb transcript_id : NM_201600.2

name	Acaa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366266 GeneID:52538 MGI:1098623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase) transcript_id : NM_177470.3

name	Lipg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543122 GeneID:16891 MGI:1341803
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipase, endothelial transcript_id : NM_010720.2

name	Rpl17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383739 GeneID:319195 MGI:2448270
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L17 transcript_id : NM_001002239.2

name	BC031181 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113679825 GeneID:407819 MGI:3039614
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC031181 transcript_id : NM_001001181.3

name	Dym (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130388 GeneID:69190 MGI:1918480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dymeclin transcript_id : NM_027727.2

name	Smad7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111154104 GeneID:17131 MGI:1100518
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 7 (Drosophila) transcript_id : NM_001042660.1

name	Gm672 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41235721 GeneID:269037 MGI:2685518
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 672, (NCBI) transcript_id : NM_201354.1

name	Zbtb7c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47271528 GeneID:207259 MGI:2443302
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger and BTB domain containing 7C transcript_id : NM_145356.3

name	2810433K01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541928 CCDS:CCDS29341.1 GeneID:66468 MGI:1913718
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC66468 protein_id : NP_079857.2

name	Cxxc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18390325 GeneID:74322 MGI:1921572
definition	GO_component : GO:0016363 - nuclear matrix [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : CpG binding protein product : CXXC finger 1 (PHD domain) protein_id : NP_083144.1

name	Mbd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305259 GeneID:17190 MGI:1333811
definition	GO_component : GO:0000785 - chromatin [Evidence IDA]; GO:0000792 - heterochromatin [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006306 - DNA methylation [Evidence TAS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : methyl-CpG binding domain protein 1 protein_id : NP_038622.1

name	Ccdc11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116812881 GeneID:74453 MGI:1921703
definition	codon_start : 1 product : coiled-coil domain containing 11 protein_id : NP_083224.1

name	Myo5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46399202 GeneID:17919 MGI:106598
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016459 - myosin [Evidence IEA] GO_function : GO:0003774 - motor activity [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 product : myosin Vb protein_id : NP_963894.1

name	Acaa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29126205 CCDS:CCDS29342.1 GeneID:52538 MGI:1098623
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_process : GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 product : acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase) protein_id : NP_803421.1

name	Lipg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543123 CCDS:CCDS29343.1 GeneID:16891 MGI:1341803
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0008201 - heparin binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004465 - lipoprotein lipase activity [Evidence IEA]; GO:0004806 - triacylglycerol lipase activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : endothelial lipase; lipose, endothelial product : lipase, endothelial protein_id : NP_034850.2

name	Rpl17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50355690 CCDS:CCDS29344.1 GeneID:319195 MGI:2448270
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0015934 - large ribosomal subunit [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ribosomal protein L17 protein_id : NP_001002239.1

name	BC031181 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47564084 GeneID:407819 MGI:3039614
definition	codon_start : 1 product : hypothetical protein LOC407819 protein_id : NP_001001181.1

name	Dym (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25282389 CCDS:CCDS29346.1 GeneID:69190 MGI:1918480
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : dymeclin protein_id : NP_082003.1

name	Smad7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111154105 GeneID:17131 MGI:1100518
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007182 - common-partner SMAD protein phosphorylation [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence IDA] codon_start : 1 product : MAD homolog 7 protein_id : NP_001036125.1

name	Gm672 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41235722 GeneID:269037 MGI:2685518
definition	GO_function : GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC269037 protein_id : NP_958742.1

name	EG435570 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435570
definition	number : 1 pseudo : _no_value

name	LOC668124 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668124
definition	number : 1 pseudo : _no_value

name	LOC668126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668126
definition	number : 1 pseudo : _no_value

name	LOC672799 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672799
definition	number : 1 pseudo : _no_value

name	LOC628356 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628356
definition	number : 1 pseudo : _no_value

name	EG667777 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149269868 GeneID:667777 MGI:3643510
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 ESTs, 15 Proteins product : predicted gene, EG667777 pseudo : _no_value transcript_id : XR_034698.1

clone name	MSMg01-360I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093B04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-486E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122E03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-148M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339C06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-071P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136M23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-379M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080O16
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-226J15.b	B6Ng01-226J15.g
ACC	GA040495	GA040496
length	613	1,099
definition	B6Ng01-226J15.b	B6Ng01-226J15.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(75,176,119 - 75,176,264)	(34,961,740 - 34,962,840)
sequence	gaattcacaataagctattgcatacctatcagaatagctaacaggaacat gcaacaacaagaacactatatgcctgggacgatgcagacactgtgttatt tacatattgctgatgggaacataacatggggaaaccactctgaaaaacag tttgatagtttcttaagtactatcagatggctgagtgtgataacacacct gtaaccctagtgcttggtgggggcaaaattagattatgagttcaaggcta ccccaggcaacataagaaagagtctctttcaaaaacaaaacaaaaataaa tatataactgccacttaaccagcaactgcttttctggaatgtaatcccag tgagatgaaaacaagttcatacaaaatcctccctacaatgattactcaac tttatttgaaatgcctataagctgggaataaatgacccacacacaggtcc ttcagtggaggaatcattaaactgtagtatatccacgccactggctacta cgaaagaaagaaggaaagaaagagagagagagagagagagagagagagag agagagagagagagagagggagagagagagagagagaaagagaaagaaag aaaaagaaagaaa	gaattcacttgtaagtaatgacaccgggttatctgtcaaggcttgatgct ttactgtgaagtgctaagcggcctccccggtcacagcctttagctgagaa ctctttaaatgaagtggcagacagtttcaccacttatccaccagccttgg gaagaccctgccctatttttgacctctgtttcttcatctgtctcctatgg tcatggtctctgtcgcttcaagacttacctgaagtactgcaaatgactgt gcccaagaaccaaagtaccacccagaagcaagaattgctgttgtagtaac ttcctgcagaatgcttttgtggggttccccctctgaatccgtctgctggg ttttgtgttggtatttggagatttgagcagaagaagaatagatttctcta gtgttgataatgtcttagcatctgggcagcccttataggccacattgctc tctgaatctcaggcctaaaaaaggcacctacaagctccccacaagaagat cttctgtttccaaggctttcaggtttgaacttttccaaaaaagccctcca gggggaatgctgaagctgggggtttgattgcctcagacaatcaagctgac agctagagtaattatcttgattatatttgacattgaggagttactaatct taaccatatgttgtgataccaactgtgtcacacacacacacacacacaca cacacacactcactagggaagcgtatggtgtggcaggagagccaagctgt gttatggaatccagggctccagaagcctcttaggggtgttccagcatcct tgtatatctgaagaagctgacttctaatccagtaccacttatgtgtattt atctactgaacatgcctctcctgagcactcagagcctggaaggtaccaga gggaaaggaaggacacattttcttcagttactaagaaaaccacggcttaa gagggagaatagcataacgtattttcttcaagcttgcttgctttattatt aatttattatttaattatatcattgacagttatacatctctacagtgcat cttgattgatcctaccctctttcccccctggaacttaccctctccactt
quality values	Open. Hide. 62 35 22 26 62 39 25 47 29 62 62 62 54 62 62 59 62 59 62 59 59 59 62 62 62 54 62 62 62 49 59 30 56 34 28 28 23 28 40 46 34 31 27 32 54 59 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 54 62 62 62 54 54 54 56 62 62 62 62 62 56 59 62 59 59 62 59 59 59 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 49 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 54 62 62 62 59 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 37 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 49 46 46 58 49 38 46 49 49 46 33 58 58 58 58 43 49 46 49 47 49 58 58 54 49 38 39 47 58 58 58 43 49 58 58 58 58 58 58 58 58 47 43 43 43 39 31 41 58 43 39 39 58 43 58 44 44 47 51 47 47 47 44 29 41 47 28 27 39 30 47 35 35 27 41 23 22 27 42 37 29 42 26 30 20 26 28 33 42 22 31	Open. Hide. 62 47 51 42 62 47 42 47 62 56 51 14 15 19 15 19 19 28 21 28 29 32 28 45 50 59 62 62 62 49 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 59 62 49 30 29 43 31 48 54 42 33 56 59 59 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 59 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 59 59 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 59 62 62 62 62 62 62 62 43 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 54 53 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 46 46 62 62 62 54 62 47 49 62 62 62 62 62 54 62 62 46 62 62 45 49 49 62 62 62 62 62 62 42 58 58 58 58 58 58 52 58 58 58 58 58 58 58 49 58 58 58 45 35 58 58 52 58 58 58 42 50 58 54 54 54 54 58 40 58 58 58 58 58 54 42 52 54 58 51 54 54 58 54 46 58 43 41 45 48 54 58 58 58 58 54 40 45 54 54 54 54 58 58 58 58 54 54 46 54 58 58 34 58 58 41 47 48 48 51 51 51 51 54 51 50 51 41 51 51 58 50 58 49 53 54 53 39 58 50 51 41 50 49 35 50 40 49 51 52 58 52 58 58 51 58 50 54 35 51 50 51 51 51 54 58 51 58 53 51 49 51 54 51 51 51 51 54 54 58 51 50 52 40 42 50 41 53 47 39 35 33 58 38 33 32 19 43 43 50 41 38 44 14 27 58 41 41 49 33 50 16 58 44 18 54 29 24 25 15 50 37 49 52 53 26 40 42 40 49 42 51 24 38 17 21 32 37 30 14 9 37 32 52 40 37 29 30 54 40 26 44 39 37 33 33 30 32 12 54 54 54 35 49 44 16 22 21 22 30 47 32 37 37 37 21 51 41 31 29 26 26 43 36 45 31 31 25 23 49 19 19 39 33 31 45 15 45 41 31 16 24 25 24 29 34 34 31 28 21 33 29 21 29 31 30 30 34 30 30 40 26 38 35 51 26 30 34 30 26 28 31 31 11 6 13 27 21 31 29 29 35 27 25 31 20 28 28 31 30 11 11 21 21 31 28 23 14 37 12 9 40 16 36 25 25 18 12 24 17 27 26 31 27 13 31 6 46 23 8 46 15 27 11 7 46 18 27 9 11 13 20 10 32 43 41 26 20 9 19 26 11 6 20 11 30 31 33 26 44 12 30 44 42 31 25 21 14 16 21 32 25 30 17 26 11 9 38 25 44 10 31 12 31 7 11 31 18 33 20 19 9 15 11 19 22 7 5 31 33 5 8 29 18 30 16 15 32 31 14 11 28 15 11 11 20 15 22 40 16 12 34 17 28 25 10 9 14 10 31 19 22 22 31 10 7 30 12 7 11 21 20 6 5 27 27 8 12 12 11 21 25 24 10 7 5 6 4 4 11 15 9 27 10 13 25 12 10 18 14 6 5 17 16 15 28 14 5 8 22 21 5 7 11 4 3 4 8 8 16 7 28 13 4 4 5 25 6 4 4 25 25 26 24 4 22 11 6 8 7 7 6 6 7 28 6 12 13 2 4 5 7 5 16 12

Alignment Information

BAC End 1

BAC End 2

seq1: chr18_75176119_75176264
seq2: B6Ng01-226J15.b_324_656 (reverse)

seq1  TTTCTTATTCTTTTTTTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTCT  50
                     |||| ||| ||  ||| |||||||  |||||||||
seq2  ---------------TTTCTTTCTTT--TTCTTTCTTTC--TCTTTCTCT  31

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  100
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  81

seq1  CTCTCTCTCTCTCTCTTT-CTTTTTTGTTTTG-------CTTTGTTTTGT  142
      |||||||||||| ||||| ||| ||| ||| |       |  ||   || 
seq2  CTCTCTCTCTCTTTCTTTCCTTCTTTCTTTCGTAGTAGCCAGTGGCGTGG  131

seq1  TTTT----------------------------------------------  146
       | |                                              
seq2  ATATACTACAGTTTAATGATTCCTCCACTGAAGGACCTGTGTGTGGGTCA  181

seq1  --------------------------------------------------  146
                                                        
seq2  TTTATTCCCAGCTTATAGGCATTTCAAATAAAGTTGAGTAATCATTGTAG  231

seq1  --------------------------------------------------  146
                                                        
seq2  GGAGGATTTTGTATGAACTTGTTTTCATCTCACTGGGATTACATTCCAGA  281

seq1  --------------------------------------------------  146
                                                        
seq2  AAAGCAGTTGCTGGTTAAGTGGCAGTTATATATTTATTTTTGTTTTGTTT  331

seq1  --  146
        
seq2  TT  333

seq1: chr6_34961740_34962840
seq2: B6Ng01-226J15.g_67_1165 (reverse)

seq1  AAGTGGGAGGAGGGTGAG-TCCAGGGGGAGAAAGAGGGGTAGATACAATC  49
      ||||||   |||||| || ||||||||| |||||| ||||||   |||||
seq2  AAGTGG--AGAGGGTAAGTTCCAGGGGG-GAAAGA-GGGTAGGATCAATC  46

seq1  AAGATGCACTGTAGAGATGTATAAAACTGTCAATGAATATAAATAAATAA  99
      ||||||||||||||||||||||  ||||||||||| |||||| ||||| |
seq2  AAGATGCACTGTAGAGATGTAT--AACTGTCAATG-ATATAATTAAAT-A  92

seq1  ATAAATAAATAAATAAAGCAAGCAAGCTTGAAG-AAATACG-TATGCTAT  147
      |||||| ||| |||||||||||||||||||||| ||||||| ||||||||
seq2  ATAAATTAAT-AATAAAGCAAGCAAGCTTGAAGAAAATACGTTATGCTAT  141

seq1  TCTCCCTCTTAAGCCGTGGTTTTCTTAGT-ACTGA--GAAATGTGTCCTT  194
      ||||||||||||||||||||||||||||| |||||   ||||||||||||
seq2  TCTCCCTCTTAAGCCGTGGTTTTCTTAGTAACTGAAGAAAATGTGTCCTT  191

seq1  CC-TTCCCTCTGGTACCTTCCAGGCTCTGAGTGCTCAGGAGAGGCATGTT  243
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCCTCTGGTACCTTCCAGGCTCTGAGTGCTCAGGAGAGGCATGTT  241

seq1  CAGTAGATAAATACACATAAGTGGTACTGGATTAGAAGTCAGCTTCTTCA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGATAAATACACATAAGTGGTACTGGATTAGAAGTCAGCTTCTTCA  291

seq1  GATATACAAGGATGCTGGAACACCCCTAAGAGGCTTCTGGAGCCCTGGAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACAAGGATGCTGGAACACCCCTAAGAGGCTTCTGGAGCCCTGGAT  341

seq1  TCCATAACACAGCTTGGCTCTCCTGCCACACCATACGCTTCCCTAGTGAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAACACAGCTTGGCTCTCCTGCCACACCATACGCTTCCCTAGTGAG  391

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACACAGTTGGTATCACAACA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACACAGTTGGTATCACAACA  441

seq1  TATGGTTAAGATTAGTAACTCCTCAATGTCAAATATAATCAAGATAATTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTAAGATTAGTAACTCCTCAATGTCAAATATAATCAAGATAATTA  491

seq1  CTCTAGCTGTCAGCTTGATTGTCTGAGGCAATCAAACCCCCAGCTTCAGC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGCTGTCAGCTTGATTGTCTGAGGCAATCAAACCCCCAGCTTCAGC  541

seq1  ATTCCCCCTGGAGGGCTTTTTTGGAAAAGTTCAAACCTGAAAGCCTTGGA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCCCTGGAGGGCTTTTTTGGAAAAGTTCAAACCTGAAAGCCTTGGA  591

seq1  AACAGAAGATCTTCTTGTGGGGAGCTTGTAGGTGCCTTTTTTAGGCCTGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAGATCTTCTTGTGGGGAGCTTGTAGGTGCCTTTTTTAGGCCTGA  641

seq1  GATTCAGAGAGCAATGTGGCCTATAAGGGCTGCCCAGATGCTAAGACATT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAGAGAGCAATGTGGCCTATAAGGGCTGCCCAGATGCTAAGACATT  691

seq1  ATCAACACTAGAGAAATCTATTCTTCTTCTGCTCAAATCTCCAAATACCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACACTAGAGAAATCTATTCTTCTTCTGCTCAAATCTCCAAATACCA  741

seq1  ACACAAAACCCAGCAGACGGATTCAGAGGGGGAACCCCACAAAAGCATTC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAACCCAGCAGACGGATTCAGAGGGGGAACCCCACAAAAGCATTC  791

seq1  TGCAGGAAGTTACTACAACAGCAATTCTTGCTTCTGGGTGGTACTTTGGT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGAAGTTACTACAACAGCAATTCTTGCTTCTGGGTGGTACTTTGGT  841

seq1  TCTTGGGCACAGTCATTTGCAGTACTTCAGGTAAGTCTTGAAGCGACAGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGCACAGTCATTTGCAGTACTTCAGGTAAGTCTTGAAGCGACAGA  891

seq1  GACCATGACCATAGGAGACAGATGAAGAAACAGAGGTCAAAAATAGGGCA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATGACCATAGGAGACAGATGAAGAAACAGAGGTCAAAAATAGGGCA  941

seq1  GGGTCTTCCCAAGGCTGGTGGATAAGTGGTGAAACTGTCTGCCACTTCAT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTCCCAAGGCTGGTGGATAAGTGGTGAAACTGTCTGCCACTTCAT  991

seq1  TTAAAGAGTTCTCAGCTAAAGGCTGTGACCGGGGAGGCCGCTTAGCACTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGTTCTCAGCTAAAGGCTGTGACCGGGGAGGCCGCTTAGCACTT  1041

seq1  CACAGTAAAGCATCAAGCCTTGACAGATAACCCGGTGTCATTACTTACAA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTAAAGCATCAAGCCTTGACAGATAACCCGGTGTCATTACTTACAA  1091

seq1  GTGAATTC  1101
      ||||||||
seq2  GTGAATTC  1099

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Alignment Information