BAC Information

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BAC

Clone NameB6Ng01-234E24
Chromosome18 (Build37)
Map Location 90,743,358 - 90,744,491
singlet/doubletsinglet
Overlap genenone
Upstream geneDok6, LOC383320, LOC620693, Eif3s6-ps2, LOC665526, Txndc10, LOC666779
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234E24.bB6Ng01-234E24.g
ACCGA046113GA046114
length1,1391,112
definitionB6Ng01-234E24.b B6Ng01-234E24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcaatcttgggatcacttctaatctcaaagacaggggtctga
tgttagctgctctagagctaaagttagaaaaaatttcctccatggatttt
atagttggaaggggagattttctgcattctgatcttcagcagaacacttc
tgtatagttatctttctattgctatcataaaatacaccatggcccagaca
aataatttaaagcgtcaaattaagcttatagttccaaagggtaagagtca
atgatggcagtataaacacatggcagcaggaagagcttagagctcacatt
tgaacctcagataagaggtaacaaacacaattggcatggtcagaagcttt
tcaagcctcaaaatacactcatgtgacacacttctttcaaaatggttatg
cgtgtgctccttcccaaactgctccaccaactgaaaaataagtatttaaa
catatgaccctatgggagccattctcatttaaccaccatatctttcttca
cttcttagtgaaaaatactttttatcctactaaactctatcatatcctta
aatgagactgctatgttttcaacatacaatgccatagggaaaacaaaaca
aaacaattctattctacaaagaatcagagcatagcaaaaaatgaacagac
caaggcaagaccaaagcccagcagagaaagcatcacatcttgtagatctt
tgctcagctacttgagattatgatgaaattgccaggaatccaaaagactt
aggtatgcctactcttcaagctctgtcagctgcagcacacatagtttctt
ttaggttaatcccactacctgcctgcagcttttctcagagctggtccgag
tatcccaaatttcttgtatatgatatctattttattttgttgaaagtggg
ttggcagggctagagatcattcagttaagagctctgttagaaccagtttc
cttcctagaactcacatgacagctcataacagtctgtaactacatttcca
tagaaaccacatatgtaaatagttggtataagctggtacctgggcattga
cttggggtgatttacataaatgatattaaaaattgtagttctgttctaca
ggaacataaaaaaagtagttttgagtggctgtttctcta

gaattcattaatattgagagctattaaagagaaacgactgttggtttctg
gtatgtttgtttttgtaggtggctttatgtgcttgtggctctctcctttt
ggctttgttgtgagatgattaatatcttgtcttttctttggtgcaggtac
cttctttgtgttggagttttccttctaggatcctttgtagggacggattg
gttgatagatactgtttgaatctggttttgtcctggaacattttgttttc
ttcatctatgttgattgaaagttttgctgggtatagtagcctgggctggc
atttgtgttctcttagagtctgcatgacctctgaccaggctcttctagct
ttcatagtctctttttagaagtctggtataattttgataagtctatgttt
gtatgttacttggtccttttcccttcctttttaatattctttcttttttc
tgtttgtttagtgtttgattattatgtgatgagaggattttcttttctgg
ccccatttatttggtgttctataggcttcttatacctttatggtcatctc
tttctttaggttggggaagttttcttctgtgattttgttgaagacttttt
cacatcctttgagctgggaatcttcgttctcttctattctgattattctt
agatttgatcttttcattgtgtcctgaatttcctggatgcttttgtttag
gacttttttatgctttgaatttttttgacagttgtgtcaatctattgtat
ggtatctcctacacctgagattctctcttctatctcttttattctgttgg
tgatacatacatctgtaattcccgatctcttttcctagatttttcatttc
caggtttgcctccatttgtgttgacattattgtttctacttctgttgttt
ctacttttagatcttggacctctattcaatttccttcacctgtttacctg
tgttttcctgtatttctttcagtgagttaatttgaataaaggactctatt
atctccatgaagtaagattttaggacagattctctgaattttcatgtgtg
gtgttgtaatcaagggcttactggtgtgctggaatgacttgtgtttctga
tgaaggccaacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_90743358_90744491
seq2: B6Ng01-234E24.b_46_1184 (reverse)

seq1  TAGAG-GACAGCAACTC-AAACTAC-TTTTTTATGTTCCCTTGTAGGACA  47
      |||||  ||||| |||| ||||||| |||||||||||||  ||||| |||
seq2  TAGAGAAACAGCCACTCAAAACTACTTTTTTTATGTTCC--TGTAGAACA  48

seq1  GAACTACA--TTTTTATATCATTTATGT-AATCA-CCCAAGTCAATG-CC  92
      ||||||||  |||| ||||||||||||| ||||| |||||||||||| ||
seq2  GAACTACAATTTTTAATATCATTTATGTAAATCACCCCAAGTCAATGCCC  98

seq1  AGGTACCAGCTTATACCCAACTATTTACATATGTGGTTTCTATGGAATTG  142
      ||||||||||||||| ||||||||||||||||||||||||||||||| ||
seq2  AGGTACCAGCTTATA-CCAACTATTTACATATGTGGTTTCTATGGAAATG  147

seq1  TAGTTACAGACTGTTATGAGCTGTCATGTGAGTTCTAGGAAGGAAACTGG  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTACAGACTGTTATGAGCTGTCATGTGAGTTCTAGGAAGGAAACTGG  197

seq1  TTCTAACAGAGCTCTTAACTGAATGATCTCTAGCCCTGCCAACCCACTTT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAACAGAGCTCTTAACTGAATGATCTCTAGCCCTGCCAACCCACTTT  247

seq1  CAACAAAATAAAATAGATATCATATACAAGAAATTTGGGATACTCGGACC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAATAAAATAGATATCATATACAAGAAATTTGGGATACTCGGACC  297

seq1  AGCTCTGAGAAAAGCTGCAGGCAGGTAGTGGGATTAACCTAAAAGAAACT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGAGAAAAGCTGCAGGCAGGTAGTGGGATTAACCTAAAAGAAACT  347

seq1  ATGTGTGCTGCAGCTGACAGAGCTTGAAGAGTAGGCATACCTAAGTCTTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGCTGCAGCTGACAGAGCTTGAAGAGTAGGCATACCTAAGTCTTT  397

seq1  TGGATTCCTGGCAATTTCATCATAATCTCAAGTAGCTGAGCAAAGATCTA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCCTGGCAATTTCATCATAATCTCAAGTAGCTGAGCAAAGATCTA  447

seq1  CAAGATGTGATGCTTTCTCTGCTGGGCTTTGGTCTTGCCTTGGTCTGTTC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGTGATGCTTTCTCTGCTGGGCTTTGGTCTTGCCTTGGTCTGTTC  497

seq1  ATTTTTTGCTATGCTCTGATTCTTTGTAGAATAGAATTGTTTTGTTTTGT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGCTATGCTCTGATTCTTTGTAGAATAGAATTGTTTTGTTTTGT  547

seq1  TTTCCCTATGGCATTGTATGTTGAAAACATAGCAGTCTCATTTAAGGATA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTATGGCATTGTATGTTGAAAACATAGCAGTCTCATTTAAGGATA  597

seq1  TGATAGAGTTTAGTAGGATAAAAAGTATTTTTCACTAAGAAGTGAAGAAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGAGTTTAGTAGGATAAAAAGTATTTTTCACTAAGAAGTGAAGAAA  647

seq1  GATATGGTGGTTAAATGAGAATGGCTCCCATAGGGTCATATGTTTAAATA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGGTGGTTAAATGAGAATGGCTCCCATAGGGTCATATGTTTAAATA  697

seq1  CTTATTTTTCAGTTGGTGGAGCAGTTTGGGAAGGAGCACACGCATAACCA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTTCAGTTGGTGGAGCAGTTTGGGAAGGAGCACACGCATAACCA  747

seq1  TTTTGAAAGAAGTGTGTCACATGAGTGTATTTTGAGGCTTGAAAAGCTTC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAAGAAGTGTGTCACATGAGTGTATTTTGAGGCTTGAAAAGCTTC  797

seq1  TGACCATGCCAATTGTGTTTGTTACCTCTTATCTGAGGTTCAAATGTGAG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATGCCAATTGTGTTTGTTACCTCTTATCTGAGGTTCAAATGTGAG  847

seq1  CTCTAAGCTCTTCCTGCTGCCATGTGTTTATACTGCCATCATTGACTCTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAGCTCTTCCTGCTGCCATGTGTTTATACTGCCATCATTGACTCTT  897

seq1  ACCCTTTGGAACTATAAGCTTAATTTGACGCTTTAAATTATTTGTCTGGG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTGGAACTATAAGCTTAATTTGACGCTTTAAATTATTTGTCTGGG  947

seq1  CCATGGTGTATTTTATGATAGCAATAGAAAGATAACTATACAGAAGTGTT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGTGTATTTTATGATAGCAATAGAAAGATAACTATACAGAAGTGTT  997

seq1  CTGCTGAAGATCAGAATGCAGAAAATCTCCCCTTCCAACTATAAAATCCA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGAAGATCAGAATGCAGAAAATCTCCCCTTCCAACTATAAAATCCA  1047

seq1  TGGAGGAAATTTTTTCTAACTTTAGCTCTAGAGCAGCTAACATCAGACCC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAAATTTTTTCTAACTTTAGCTCTAGAGCAGCTAACATCAGACCC  1097

seq1  CTGTCTTTGAGATTAGAAGTGATCCCAAGATTGAGAGAATTC  1134
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTTGAGATTAGAAGTGATCCCAAGATTGAGAGAATTC  1139


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