BAC Information

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BAC

Clone NameB6Ng01-240B22
Chromosome18 (Build37)
Map Location 75,151,089 - 75,293,318
singlet/doubletdoublet
Overlap geneRpl17, BC031181, Dym
Upstream geneMapk4, 2810433K01Rik, Cxxc1, EG435570, Mbd1, Ccdc11, LOC628298, LOC668124, LOC668126, Myo5b, Acaa2, LOC672799, Lipg
Downstream geneLOC628356, EG667777, Smad7, Gm672, Zbtb7c, 4833419G08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240B22.bB6Ng01-240B22.g
ACCGA050370GA050371
length1,0691,075
definitionB6Ng01-240B22.b B6Ng01-240B22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,151,089 - 75,152,167)(75,292,232 - 75,293,318)
sequence
ggaattcctatatccctttcctggattctttcttataccaggcagatgta
atggaaagagaaccagttgactcaagcccacctctcttgaaccccaagtg
aatgcatccgcagccacctatctgagttgggagccagtttacaaagctgt
tgtggagactctgggggaacacagcagcttgttccattctcatctcctcc
ccactctgctacaggtctgtactatcttctctctgtgtgctagaattact
ttcctgtcacccagaatactcattgacactcagttgacatacaaagatag
agactagtcttcagtccctcacctactctgtggtttacaaggttcaaaag
cctttcttcgtaacaagaaaattggagtatggagatgatttgctgtaaca
ggtactaagagcatccaaataattacaaagatacagtcaggaagtcatat
ttcataagagggaaaaaggaagaaaagccaaagaaattctaaaccttcca
cttagggtaagtgggcaaatacccaggcacaaagtcaactatgttgtgca
catgttgactccagtcttagagttatcgtgaagggcttaaaagggcattt
atcaaggtgcgttacaggatatttgatcacactgtgaaccctgagttgtt
tacaggaaaaacctgtttatagttgtgatatggctcagccttagcacgca
cctttaatccctctggctggaatacagagatgcccttaatacacctttaa
tcccaaacaatgaaggtaaagttagtttgtaggaagaagcacccatgttt
gaaagtggtacctaggctgggtgtggtggctcacacctttgatcccagca
cttgggaggcagagggcaggcggatttctgagtttcgcggacagcctggc
cctacaaagtgagttccaggacagccaggctatacagagaaaccctgtct
tgaaaacccaaaaaaaaaaaaaagaaaagaaaagaagaaagaaagtgata
ctctagccggcagtgtgatgccacgcttattcccagctacttggaagcag
agcaggcgatttctgagtt
gaattctctatgaaaaagtcagatcacacgcactgctgggatttggtaaa
tactgcacatttatgatggctagagctctagagtccctcacaggagcttg
ctgagacccacccattcaagtaaactgctactatcaaaaacctctgccta
catccaatggcatcaccatttgcatcatttccggaaatattgactatcag
aagataccagggcacttgagaggctgaaagagaatggacttaggttcaac
tcatcccaggcaggccatgcagcaagttcaaggatagcctgtggtacaaa
gtggatctcttgcaaaggtaatggaagccagaagggatagggaagagctg
agagcaaagccctttctttcaccaggtaccttggacaagacctctgagat
gtgcccaacctgtggcccaggggccacatacagctgagaaaccagcacaa
aactgttgatcacacatttgtcaagactgtgacggtgtcacactgcgatg
tcagaaggtcagaaacgccgcagtgtttaactgcatgctgctgccgtggg
cctccgacggcatgcacgctgctctcaggtttcagctggccccgtttccc
ttgcctgtctcaagcactaggacctgctaccttctcactcactgctctaa
cacacggccagacggccgacacccactttcctgaggtggaaaactgctca
aacagaagggggaattaaagacttagaaatggcaccaatcccttcttggg
gtctgcagggcaactaacagcaagataaaaatttcatatccacatcttcc
ttttgctatcttcttcatcttaaaaactctgggcagagtccagctttact
ctgcacgcaaactttaaccatccaagcagactcagtctgaaaggccgcac
catcttccccagctcgtccctcttctacagtggagatggggagaaaggta
accaagcagctttttaattttgttttggtttttttgtttgtttgtttttg
agactggttggtttcttctgtgtgtagctctgctgtctgtactcactctg
tagacagctgcctctaattacagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_75151089_75152167
seq2: B6Ng01-240B22.b_45_1112

seq1  GAATTCCTATATCCCTTTCCTGGATTCTTTCTTATACCAGGCAGATGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATATCCCTTTCCTGGATTCTTTCTTATACCAGGCAGATGTAA  50

seq1  TGGAAAGAGAACCAGTTGACTCAAGCCCACCTCTCTTGAACCCCAAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGAGAACCAGTTGACTCAAGCCCACCTCTCTTGAACCCCAAGTGA  100

seq1  ATGCATCCGCAGCCACCTATCTGAGTTGGGAGCCAGTTTACAAAGCTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATCCGCAGCCACCTATCTGAGTTGGGAGCCAGTTTACAAAGCTGTT  150

seq1  GTGGAGACTCTGGGGGAACACAGCAGCTTGTTCCATTCTCATCTCCTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGACTCTGGGGGAACACAGCAGCTTGTTCCATTCTCATCTCCTCCC  200

seq1  CACTCTGCTACAGGTCTGTACTATCTTCTCTCTGTGTGCTAGAATTACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGCTACAGGTCTGTACTATCTTCTCTCTGTGTGCTAGAATTACTT  250

seq1  TCCTGTCACCCAGAATACTCATTGACACTCAGTTGACATACAAAGATAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCACCCAGAATACTCATTGACACTCAGTTGACATACAAAGATAGA  300

seq1  GACTAGTCTTCAGTCCCTCACCTACTCTGTGGTTTACAAGGTTCAAAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGTCTTCAGTCCCTCACCTACTCTGTGGTTTACAAGGTTCAAAAGC  350

seq1  CTTTCTTCGTAACAAGAAAATTGGAGTATGGAGATGATTTGCTGTAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCGTAACAAGAAAATTGGAGTATGGAGATGATTTGCTGTAACAG  400

seq1  GTACTAAGAGCATCCAAATAATTACAAAGATACAGTCAGGAAGTCATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAAGAGCATCCAAATAATTACAAAGATACAGTCAGGAAGTCATATT  450

seq1  TCATAAGAGGGAAAAAGGAAGAAAAGCCAAAGAAATTCTAAACCTTCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGAGGGAAAAAGGAAGAAAAGCCAAAGAAATTCTAAACCTTCCAC  500

seq1  TTAGGGTAAGTGGGCAAATACCCAGGCACAAAGTCAACTATGTTGTGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGTAAGTGGGCAAATACCCAGGCACAAAGTCAACTATGTTGTGCAC  550

seq1  ATGTTGACTCCAGTCTTAGAGTTATCGTGAAGGGCTTAAAAGGGCATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGACTCCAGTCTTAGAGTTATCGTGAAGGGCTTAAAAGGGCATTTA  600

seq1  TCAAGGTGCGTTACAGGATATTTGATCACACTGTGAACCCTGAGTTGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGTGCGTTACAGGATATTTGATCACACTGTGAACCCTGAGTTGTTT  650

seq1  ACAGGAAAAACCTGTTTATAGTTGTGATATGGCTCAGCCTTAGCACGCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAAAACCTGTTTATAGTTGTGATATGGCTCAGCCTTAGCACGCAC  700

seq1  CTTTAATCCCTCTGGCTGGAATACAGAGATGCCCTTAATACACCTTTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCCCTCTGGCTGGAATACAGAGATGCCCTTAATACACCTTTAAT  750

seq1  CCCAAACAATGAAGGTAAAGTTAGTTTGTAGGAAGAAGCACCCATGTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACAATGAAGGTAAAGTTAGTTTGTAGGAAGAAGCACCCATGTTTG  800

seq1  AAAGTGGTACCTAGGCTGGGTGTGGTGGCTCACACCTTTGATCCCAGCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGTACCTAGGCTGGGTGTGGTGGCTCACACCTTTGATCCCAGCAC  850

seq1  TTGGGAGGCAGA-GGCAGGCGGATTTCTGAG-TTCGCGGACAGCCTGG-C  897
      |||||||||||| |||||||||||||||||| |||||||||||||||| |
seq2  TTGGGAGGCAGAGGGCAGGCGGATTTCTGAGTTTCGCGGACAGCCTGGCC  900

seq1  CTACAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCT  947
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTACAAAGTGAGTTCCAGGACAGCCA-GGCTATACAGAGAAACCCTGTCT  949

seq1  TGAAAAACCAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAGAAAG  997
      |||||| ||||||||||||||||        |||||||||   |||||||
seq2  TGAAAACCCAAAAAAAAAAAAAA-------GAAAAGAAAA--GAAGAAAG  990

seq1  AAAGTGATAC-CTAGCCGGGCAGTGGTGGTG-CACGCCTTTAATCCCAGC  1045
      |||||||||| |||||| |||||| ||| || |||||  ||| |||||||
seq2  AAAGTGATACTCTAGCC-GGCAGT-GTGATGCCACGC--TTATTCCCAGC  1036

seq1  -ACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTT  1079
       |||| ||| ||||| |||||| ||||||||||||
seq2  TACTT-GGAAGCAGA-GCAGGC-GATTTCTGAGTT  1068

seq1: chr18_75292232_75293318
seq2: B6Ng01-240B22.g_67_1141 (reverse)

seq1  TTCTGTTAATTAGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGC  50
      ||||| |||||||||| ||||   ||||||||||||||| |   ||||| 
seq2  TTCTG-TAATTAGAGG-CAGC--TGTCTACAGAGTGAGTAC--AGACAG-  43

seq1  CAGAGCTACACACAGAGAAACCCAACCCAGTCTCAAAAAACAAAACAAAA  100
      ||||||||||||||||  || |||| |||||||| |||||||||   |||
seq2  CAGAGCTACACACAGAAGAAACCAA-CCAGTCTC-AAAAACAAA--CAAA  89

seq1  CAAAAAAACCAAAACAAAATTAAAAAGCTGCCTTGGTTACCTTTCTCCCC  150
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAAAAAAACCAAAACAAAATTAAAAAGCTG-CTTGGTTACCTTTCTCCCC  138

seq1  ATCTCCACTGTAGAAGAGGGACGAGCTGGGGAAGATGGTGCGGCCTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCACTGTAGAAGAGGGACGAGCTGGGGAAGATGGTGCGGCCTTTCA  188

seq1  GACTGAGTCTGCTTGGATGGTTAAAGTTTGCGTGCAGAGTAAAGCTGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGTCTGCTTGGATGGTTAAAGTTTGCGTGCAGAGTAAAGCTGGAC  238

seq1  TCTGCCCAGAGTTTTTAAGATGAAGAAGATAGCAAAAGGAAGATGTGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCAGAGTTTTTAAGATGAAGAAGATAGCAAAAGGAAGATGTGGAT  288

seq1  ATGAAATTTTTATCTTGCTGTTAGTTGCCCTGCAGACCCCAAGAAGGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTTTTATCTTGCTGTTAGTTGCCCTGCAGACCCCAAGAAGGGAT  338

seq1  TGGTGCCATTTCTAAGTCTTTAATTCCCCCTTCTGTTTGAGCAGTTTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCCATTTCTAAGTCTTTAATTCCCCCTTCTGTTTGAGCAGTTTTCC  388

seq1  ACCTCAGGAAAGTGGGTGTCGGCCGTCTGGCCGTGTGTTAGAGCAGTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGGAAAGTGGGTGTCGGCCGTCTGGCCGTGTGTTAGAGCAGTGAG  438

seq1  TGAGAAGGTAGCAGGTCCTAGTGCTTGAGACAGGCAAGGGAAACGGGGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGGTAGCAGGTCCTAGTGCTTGAGACAGGCAAGGGAAACGGGGCC  488

seq1  AGCTGAAACCTGAGAGCAGCGTGCATGCCGTCGGAGGCCCACGGCAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAACCTGAGAGCAGCGTGCATGCCGTCGGAGGCCCACGGCAGCAG  538

seq1  CATGCAGTTAAACACTGCGGCGTTTCTGACCTTCTGACATCGCAGTGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGTTAAACACTGCGGCGTTTCTGACCTTCTGACATCGCAGTGTGA  588

seq1  CACCGTCACAGTCTTGACAAATGTGTGATCAACAGTTTTGTGCTGGTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGTCACAGTCTTGACAAATGTGTGATCAACAGTTTTGTGCTGGTTTC  638

seq1  TCAGCTGTATGTGGCCCCTGGGCCACAGGTTGGGCACATCTCAGAGGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGTATGTGGCCCCTGGGCCACAGGTTGGGCACATCTCAGAGGTCT  688

seq1  TGTCCAAGGTACCTGGTGAAAGAAAGGGCTTTGCTCTCAGCTCTTCCCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAAGGTACCTGGTGAAAGAAAGGGCTTTGCTCTCAGCTCTTCCCTA  738

seq1  TCCCTTCTGGCTTCCATTACCTTTGCAAGAGATCCACTTTGTACCACAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCTGGCTTCCATTACCTTTGCAAGAGATCCACTTTGTACCACAGG  788

seq1  CTATCCTTGAACTTGCTGCATGGCCTGCCTGGGATGAGTTGAACCTAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTTGAACTTGCTGCATGGCCTGCCTGGGATGAGTTGAACCTAAGT  838

seq1  CCATTCTCTTTCAGCCTCTCAAGTGCCCTGGTATCTTCTGATAGTCAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTCTTTCAGCCTCTCAAGTGCCCTGGTATCTTCTGATAGTCAATA  888

seq1  TTTCCGGAAATGATGCAAATGGTGATGCCATTGGATGTAGGCAGAGGTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCGGAAATGATGCAAATGGTGATGCCATTGGATGTAGGCAGAGGTTT  938

seq1  TTGATAGTAGCAGTTTACTTGAATGGGTGGGTCTCAGCAAGCTCCTGTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGTAGCAGTTTACTTGAATGGGTGGGTCTCAGCAAGCTCCTGTGA  988

seq1  GGGACTCTAGAGCTCTAGCCATCATAAATGTGCAGTATTTACCAAATCCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTCTAGAGCTCTAGCCATCATAAATGTGCAGTATTTACCAAATCCC  1038

seq1  AGCAGTGCGTGTGATCTGACTTTTTCATAGAGAATTC  1087
      |||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGCGTGTGATCTGACTTTTTCATAGAGAATTC  1075