BAC Information

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BAC

Clone NameB6Ng01-252B22
Chromosome18 (Build37)
Map Location 59,734,907 - 59,735,981
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc27a6, Isoc1, Adamts19, A730017C20Rik, 4833446K15Rik
Downstream geneLOC667549, EG240327, LOC546714, EG225594, F830016B08Rik, LOC667578, EG667584, LOC435565, Iigp1, EG629292, LOC667597, 2010002N04Rik, Dctn4, Rbm22, Myoz3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252B22.bB6Ng01-252B22.g
ACCGA059203GA059204
length1,1641,060
definitionB6Ng01-252B22.b B6Ng01-252B22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagctgaggaataccgaatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaaa
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagacgctggcgtggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctc
aggaaattggacatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tcttcatagcagcctttatttataatagccagaagctggaaagaacccag
atgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaa
tggaatactactcagctattaaaaagaatgaatttatgaaattcctagcc
aaatggatggacctggagggcatcatcctgagtgaggtaacacattcaca
aaggaactcacacaatatgtactcactgataagtggatattagccccaaa
cctaggattcccaagatataagatacaatttgctaaacacatgaaactca
agaagaatgaagactgaagtgtggacactatgcccctccttagaagtggg
gacaaaacacccatggaaggagttacagagacaaagtttggagctgagat
gaaaggatggaccatgtagagactgccatatccagggatccaccccataa
tcagcatccaaacgctgacaccattgcatacactagcaagattttatcga
aaggacccagatgtagctgtctcttgtgagactatactggggcctagcaa
acacagaagtggatgctcacagtcagctaatggatggatcacagggctcc
caatggaggagctggagaaagaacccaaggagctaaagggatctgcaccc
tataggtggaacgacattatgaactaaccagtacccggagctctgactct
agctgcatatgtactaaagatgcctagtcggcatcactgaagagagccca
tgacagcaactttatatgccccagtacagggaacgccaggtccaaagggg
aatgtgctgtgata
gaattcttaccaataaaaactctttattgaggcagtgtttgaaaccctac
tccttagcaattagcttctgacttctaccttgtcatctgttttcaactaa
aaggtctatgttgctttttccaaataacaataaaaatcataaacaaggat
tgtggatgtcttttcagtcctctaccttcaaatttcatcctagttttagg
aaagcacacttgaatgtaagcaatttatgctgacacaccatgaggaccac
aaagcacttggtctttgaagagtcctggagatcaggtgctctgactccat
tccttgttactccaaatctccctaattccaattgtatttcttattctttt
ccatgttagattgcttgtatttattttaaatggagaattcaagtcagtcg
gcaatggggaatttaaaaattctaatctcacaattcgattacataatttc
gattattttttttttaggtttttactttttaaaaatttttcttaggtatt
ttcttcatttacatttccagtgctatcccaaaattcccccatacctcccc
ccactcccctactcacccactcccacttcttggccctggcgttcccctat
actgaggcatacttactatcagtcactggatttttatttgttttatgcat
tatattacttactacatgtctttagatactacaagagagattgaatttta
gcctttactctttattatatctggaaatttaaaaaaagattataaacatg
tctatcacattatgtttttctaccaatctcacaaatttctatgatagtta
acatgtagtctagttaggttaatatgtagtctagttaggttaatatacat
tttaaaatcttctttgcaccatatttttgtggtagtcatagttttatcaa
tgacaatgaatgataaatggaaataaactacattagagagtattagcaag
ttattagcatatatatatatatatatatatatatccacagcagggccagc
tttacgatcaaactcagagcttccatgatgggagacaattatggggagaa
atttacagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_59734907_59735981
seq2: B6Ng01-252B22.g_67_1126 (reverse)

seq1  GACTGTAAATTTTCCTCCCCATAATTTGTCTCCCAATCATGGGAAGCTCC  50
      ||||||||||||  |||||||||| ||||||||| ||||| |||||||| 
seq2  GACTGTAAATTT--CTCCCCATAA-TTGTCTCCC-ATCAT-GGAAGCTC-  44

seq1  TTGGAGTTTGGATTCGTAAAGCCTGCCCTGCCTGTGGAATATATATATAT  100
         |||||||   |||||||||  |||||| |||||| ||||||||||||
seq2  --TGAGTTTG--ATCGTAAAGCTGGCCCTG-CTGTGG-ATATATATATAT  88

seq1  ATATATATATATATGCTAATAACTTGCTTAATACTTCTTCTAATGTAGTT  150
      ||||||||||||||||||||||||||| |||||||   ||||||||||||
seq2  ATATATATATATATGCTAATAACTTGC-TAATACT--CTCTAATGTAGTT  135

seq1  TATTTCCATTTATCATTCATTGTCATTGATAAAACTATGACTACCACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCATTTATCATTCATTGTCATTGATAAAACTATGACTACCACAAA  185

seq1  AATATGGTGCAAAGAAGATTTTAAAATGTATATTAACCTAACTAGACTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGGTGCAAAGAAGATTTTAAAATGTATATTAACCTAACTAGACTAC  235

seq1  ATATTAACCTAACTAGACTACATGTTAACTATCATAGAAATTTGTGAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAACCTAACTAGACTACATGTTAACTATCATAGAAATTTGTGAGAT  285

seq1  TGGTAGAAAAACATAATGTGATAGACATGTTTATAATCTTTTTTTAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAAAAACATAATGTGATAGACATGTTTATAATCTTTTTTTAAATT  335

seq1  TCCAGATATAATAAAGAGTAAAGGCTAAAATTCAATCTCTCTTGTAGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATATAATAAAGAGTAAAGGCTAAAATTCAATCTCTCTTGTAGTAT  385

seq1  CTAAAGACATGTAGTAAGTAATATAATGCATAAAACAAATAAAAATCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGACATGTAGTAAGTAATATAATGCATAAAACAAATAAAAATCCAG  435

seq1  TGACTGATAGTAAGTATGCCTCAGTATAGGGGAACGCCAGGGCCAAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGATAGTAAGTATGCCTCAGTATAGGGGAACGCCAGGGCCAAGAAG  485

seq1  TGGGAGTGGGTGAGTAGGGGAGTGGGGGGAGGTATGGGGGAATTTTGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGTGGGTGAGTAGGGGAGTGGGGGGAGGTATGGGGGAATTTTGGGA  535

seq1  TAGCACTGGAAATGTAAATGAAGAAAATACCTAAGAAAAATTTTTAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACTGGAAATGTAAATGAAGAAAATACCTAAGAAAAATTTTTAAAAA  585

seq1  GTAAAAACCTAAAAAAAAAATAATCGAAATTATGTAATCGAATTGTGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAACCTAAAAAAAAAATAATCGAAATTATGTAATCGAATTGTGAGA  635

seq1  TTAGAATTTTTAAATTCCCCATTGCCGACTGACTTGAATTCTCCATTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATTTTTAAATTCCCCATTGCCGACTGACTTGAATTCTCCATTTAA  685

seq1  AATAAATACAAGCAATCTAACATGGAAAAGAATAAGAAATACAATTGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATACAAGCAATCTAACATGGAAAAGAATAAGAAATACAATTGGAA  735

seq1  TTAGGGAGATTTGGAGTAACAAGGAATGGAGTCAGAGCACCTGATCTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAGATTTGGAGTAACAAGGAATGGAGTCAGAGCACCTGATCTCCA  785

seq1  GGACTCTTCAAAGACCAAGTGCTTTGTGGTCCTCATGGTGTGTCAGCATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTTCAAAGACCAAGTGCTTTGTGGTCCTCATGGTGTGTCAGCATA  835

seq1  AATTGCTTACATTCAAGTGTGCTTTCCTAAAACTAGGATGAAATTTGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTTACATTCAAGTGTGCTTTCCTAAAACTAGGATGAAATTTGAAG  885

seq1  GTAGAGGACTGAAAAGACATCCACAATCCTTGTTTATGATTTTTATTGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGGACTGAAAAGACATCCACAATCCTTGTTTATGATTTTTATTGTT  935

seq1  ATTTGGAAAAAGCAACATAGACCTTTTAGTTGAAAACAGATGACAAGGTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAAAAAGCAACATAGACCTTTTAGTTGAAAACAGATGACAAGGTA  985

seq1  GAAGTCAGAAGCTAATTGCTAAGGAGTAGGGTTTCAAACACTGCCTCAAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAGAAGCTAATTGCTAAGGAGTAGGGTTTCAAACACTGCCTCAAT  1035

seq1  AAAGAGTTTTTATTGGTAAGAATTC  1075
      |||||||||||||||||||||||||
seq2  AAAGAGTTTTTATTGGTAAGAATTC  1060