BAC Information

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BAC

Clone NameB6Ng01-254H10
Chromosome18 (Build37)
Map Location 14,631,984 - 14,783,942
singlet/doubletdoublet
Overlap geneLOC100040129, EG623867
Upstream geneLOC100040358, Zfp521, LOC100040094, LOC100040103, LOC100040391, LOC382096
Downstream geneSs18, LOC100040446, Psma8, Taf4b, LOC669965, Kctd1, EG622268, LOC100040151, Aqp4, LOC665473, Chst9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254H10.bB6Ng01-254H10.g
ACCGA060922GA060923
length9211,177
definitionB6Ng01-254H10.b B6Ng01-254H10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,783,025 - 14,783,942)(14,631,984 - 14,633,164)
sequence
ggaattctttctctgaaaatgaagtccgtgaagctataatcaagatgact
gaattagataaatgagttgaagagacaaaattgtgctgatcccaacctgg
tggagatacgttatctcatttgaaatgagctcaactgacattaagaaata
atttgtcttgccaacccatcttctgttgtcttattctcctttaatggaaa
ctaaaattgcaattttaataagcagaatttcctccaggactgtcttcctg
gagactggtgcatttgcaaggtttaattgttttataacggtcctgtttcg
taaaagtttttaattggtggtgacaaagattaccgtaatcctttggtgcc
tagtaagaacaataacttcaccggcagcctttctaccgaagctgacattt
tcatataaaaaaaaagtagaaattttattttatcgaatgaattataaata
agttttgtagtatcccatgaaatagcatggctgtttccgaattgccaagt
gtgctggtgccattgtgtgtgactattagcgtcattctgcagctttgcct
ggtggcacagtgacctgcagagagtggggacatgtgccccacgtgcagct
acacaccccactcactcagcacacgggccgatcttctgttgtttgtcctc
cttcccataagcagaggcgagcactgttactttgctcttaaatatttcag
gaaggacctgaaggattcctttttaagaattcttttgctctgagattctg
tattttcagtaataatattcagttcagcatcatcttacaggctttacatt
cagactgctgccttttctctcacgttaaacaaaagattaacaagtaaatt
acataaaagtgataaacatttttatataactgtcatataaaaggtgatga
ttattgagaatctggtaaaag
gaattccaggactccaagtctgacaagtttccagtggggaacaggagact
ttgtcttcaggtttccctcttagaaatgagagctagatgggtggtacaga
catttccaggcagtcagccaagtcagcgatcccagacatgcatgtactat
gagatacactgactgcccttctctcaggctgatgtccaagccccttccca
tgcccaatcatatctccttatatctctaaagtaaggaccaaattcagaaa
agccagtggactctattctggctccaaggcagagagctaccaggaactgg
cagtttgcacacacacacacacacacacacacacacacacacacacacac
acacctgcacccttacccctagctgctacagtcagtcagaggttaggtaa
ccaaaacaaaaagtaaacgatgacttcagtgaggagttcaccaggggcac
aggcaagaggtttgccatttctgttgtctttctgagcatcagaagcagtt
tggacgaagtcagtgctgttcagagttctgcagataagtgtaatatacgt
atacgtttcaaaggtctccccagattgtgatacctcagttggatactgtg
ggtggatggcactgtgctggttttacttctattgccctaaagcacccgtg
aaggagtcttggtgacaaatttgtttctgaggaaaacagctgtcactgcc
agcaccctgtgcttcctaagcacaccgttttcttggaagaaaccagaatc
attttagttgctccatattagtttacttgcctgagcatgtgctctcaatg
aaaccctgccattagcgcccaatgttccaaccggctaactagctaaggga
tagccgttcactgacgaagtctgccatccgctgcaattcgtcgggcagtg
ccgggtcttgtcagagaagccccaacaacaaatactacttctggtgacca
aagttaaccacaatgccatcaaggcaacgttccctgagaaaacttatcac
ttgaagtaggctccttgctgaggccgggggcttccgttcctgaggtgaaa
attgatctctgggggaagctccaaccaccttcagccatgaaatgtggctt
ggacatattagaagcatgggggtgaggccaaatgtgtgggattcaagggg
actgaagaactcgattcagaacatgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_14783025_14783942
seq2: B6Ng01-254H10.b_46_965 (reverse)

seq1  CTTTTA-CAGATCTTCAATAATCATCACCTTTTATATGACAGTTATAT-A  48
      |||||| |||||  |||||||||||||||||||||||||||||||||| |
seq2  CTTTTACCAGATTCTCAATAATCATCACCTTTTATATGACAGTTATATAA  50

seq1  AAATGTTTATCACTTTTATGTAATTTACTTGTTAATCTTTTGTTTAACGT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTATCACTTTTATGTAATTTACTTGTTAATCTTTTGTTTAACGT  100

seq1  GAGAGAAAAGGCAGCAGTCTGAATGTAAAGCCTGTAAGATGATGCTGAAC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAAAGGCAGCAGTCTGAATGTAAAGCCTGTAAGATGATGCTGAAC  150

seq1  TGAATATTATTACTGAAAATACAGAATCTCAGAGCAAAAGAATTCTTAAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTATTACTGAAAATACAGAATCTCAGAGCAAAAGAATTCTTAAA  200

seq1  AAGGAATCCTTCAGGTCCTTCCTGAAATATTTAAGAGCAAAGTAACAGTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATCCTTCAGGTCCTTCCTGAAATATTTAAGAGCAAAGTAACAGTG  250

seq1  CTCGCCTCTGCTTATGGGAAGGAGGACAAACAACAGAAGATCGGCCCGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCCTCTGCTTATGGGAAGGAGGACAAACAACAGAAGATCGGCCCGTG  300

seq1  TGCTGAGTGAGTGGGGTGTGTAGCTGCACGTGGGGCACATGTCCCCACTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGTGAGTGGGGTGTGTAGCTGCACGTGGGGCACATGTCCCCACTC  350

seq1  TCTGCAGGTCACTGTGCCACCAGGCAAAGCTGCAGAATGACGCTAATAGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGGTCACTGTGCCACCAGGCAAAGCTGCAGAATGACGCTAATAGT  400

seq1  CACACACAATGGCACCAGCACACTTGGCAATTCGGAAACAGCCATGCTAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACAATGGCACCAGCACACTTGGCAATTCGGAAACAGCCATGCTAT  450

seq1  TTCATGGGATACTACAAAACTTATTTATAATTCATTCGATAAAATAAAAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGGATACTACAAAACTTATTTATAATTCATTCGATAAAATAAAAT  500

seq1  TTCTACTTTTTTTTTATATGAAAATGTCAGCTTCGGTAGAAAGGCTGCCG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTTTTTTTTTATATGAAAATGTCAGCTTCGGTAGAAAGGCTGCCG  550

seq1  GTGAAGTTATTGTTCTTACTAGGCACCAAAGGATTACGGTAATCTTTGTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTTATTGTTCTTACTAGGCACCAAAGGATTACGGTAATCTTTGTC  600

seq1  ACCACCAATTAAAAACTTTTACGAAACAGGACCGTTATAAAACAATTAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAATTAAAAACTTTTACGAAACAGGACCGTTATAAAACAATTAAA  650

seq1  CCTTGCAAATGCACCAGTCTCCAGGAAGACAGTCCTGGAGGAAATTCTGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCAAATGCACCAGTCTCCAGGAAGACAGTCCTGGAGGAAATTCTGC  700

seq1  TTATTAAAATTGCAATTTTAGTTTCCATTAAAGGAGAATAAGACAACAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAAATTGCAATTTTAGTTTCCATTAAAGGAGAATAAGACAACAGA  750

seq1  AGATGGGTTGGCAAGACAAATTATTTCTTAATGTCAGTTGAGCTCATTTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGTTGGCAAGACAAATTATTTCTTAATGTCAGTTGAGCTCATTTC  800

seq1  AAATGAGATAACGTATCTCCACCAGGTTGGGATCAGCACAATTTTGTCTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGATAACGTATCTCCACCAGGTTGGGATCAGCACAATTTTGTCTC  850

seq1  TTCAACTCATTTATCTAATTCAGTCATCTTGATTATAGCTTCACGGACTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTCATTTATCTAATTCAGTCATCTTGATTATAGCTTCACGGACTT  900

seq1  CATTTTCAGAGAAAGAATTC  918
      ||||||||||||||||||||
seq2  CATTTTCAGAGAAAGAATTC  920

seq1: chr18_14631984_14633164
seq2: B6Ng01-254H10.g_68_1244

seq1  GAATTCCAGGACTCCAAGTCTGACAAGTTTCCAGTGGGGAACAGGAGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACTCCAAGTCTGACAAGTTTCCAGTGGGGAACAGGAGACT  50

seq1  TTGTCTTCAGGTTTCCCTCTTAGAAATGAGAGCTAGATGGGTGGTACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTCAGGTTTCCCTCTTAGAAATGAGAGCTAGATGGGTGGTACAGA  100

seq1  CATTTCCAGGCAGTCAGCCAAGTCAGCGATCCCAGACATGCATGTACTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCAGGCAGTCAGCCAAGTCAGCGATCCCAGACATGCATGTACTAT  150

seq1  GAGATACACTGACTGCCCTTCTCTCAGGCTGATGTCCAAGCCCCTTCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACACTGACTGCCCTTCTCTCAGGCTGATGTCCAAGCCCCTTCCCA  200

seq1  TGCCCAATCATATCTCCTTATATCTCTAAAGTAAGGACCAAATTCAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAATCATATCTCCTTATATCTCTAAAGTAAGGACCAAATTCAGAAA  250

seq1  AGCCAGTGGACTCTATTCTGGCTCCAAGGCAGAGAGCTACCAGGAACTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTGGACTCTATTCTGGCTCCAAGGCAGAGAGCTACCAGGAACTGG  300

seq1  CAGTTTGCACACACACACACACACACACACACACACACACACACACACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGCACACACACACACACACACACACACACACACACACACACACAC  350

seq1  ACACCTGCACCCTTACCCCTAGCTGCTACAGTCAGTCAGAGGTTAGGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTGCACCCTTACCCCTAGCTGCTACAGTCAGTCAGAGGTTAGGTAA  400

seq1  CCAAAACAAAAAGTAAACGATGACTTCAGTGAGGAGTTCACCAGGGGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACAAAAAGTAAACGATGACTTCAGTGAGGAGTTCACCAGGGGCAC  450

seq1  AGGCAAGAGGTTTGCCATTTCTGTTGTCTTTCTGAGCATCAGAAGCAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGAGGTTTGCCATTTCTGTTGTCTTTCTGAGCATCAGAAGCAGTT  500

seq1  TGGACGAAGTCAGTGCTGTTCAGAGTTCTGCAGATAAGTGTAATATACGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACGAAGTCAGTGCTGTTCAGAGTTCTGCAGATAAGTGTAATATACGT  550

seq1  ATACGTTTCAAAGGTCTCCCCAGATTGTGATACCTCAGTTGGATACTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGTTTCAAAGGTCTCCCCAGATTGTGATACCTCAGTTGGATACTGTG  600

seq1  GGTGGATGGCACTGTGCTGGTTTTACTTCTATTGCCCTAAAGCACCCGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGATGGCACTGTGCTGGTTTTACTTCTATTGCCCTAAAGCACCCGTG  650

seq1  AAGGAGTCTTGGTGACAAATTTGTTTCTGAGGAAAACAGCTGTCACTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTCTTGGTGACAAATTTGTTTCTGAGGAAAACAGCTGTCACTGCC  700

seq1  AGCACCCTGTGCTTCCTAAGCACACCGTTTTCTTGGAAGAAACCAGAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCTGTGCTTCCTAAGCACACCGTTTTCTTGGAAGAAACCAGAATC  750

seq1  ATTTTAGTTGCTCCATATTAGTTTACTTGCCTGAGCATGTGCTCTCAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGTTGCTCCATATTAGTTTACTTGCCTGAGCATGTGCTCTCAATG  800

seq1  AAACCCTGCCATTAGCGCCCAATGTTCCAACCGGCTAACTAGCTAA-GGA  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACCCTGCCATTAGCGCCCAATGTTCCAACCGGCTAACTAGCTAAGGGA  850

seq1  TAGCCGTTCACTGACGAAGTCTGCCATCCGCTGCAATTCGTC-GGCAGTG  898
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAGCCGTTCACTGACGAAGTCTGCCATCCGCTGCAATTCGTCGGGCAGTG  900

seq1  CC-GGTCTTGTCAGAGAAGCCCC-ACAACAAATAC-ACTTCTGGTGACC-  944
      || |||||||||||||||||||| ||||||||||| ||||||||||||| 
seq2  CCGGGTCTTGTCAGAGAAGCCCCAACAACAAATACTACTTCTGGTGACCA  950

seq1  AAGTTAA-CACAATGCCATCAGGGCAACCGTCCCTGAGAAAACTTATCAC  993
      ||||||| ||||||||||||| ||||||  ||||||||||||||||||||
seq2  AAGTTAACCACAATGCCATCAAGGCAACGTTCCCTGAGAAAACTTATCAC  1000

seq1  -TGAAGTAGGCTCCTTGCTGAAGGCCGGGGGCTTCCCTTTCTGAGGGTGA  1042
       ||||||||||||||||||| ||||||||||||||| || |||| |||||
seq2  TTGAAGTAGGCTCCTTGCTG-AGGCCGGGGGCTTCCGTTCCTGA-GGTGA  1048

seq1  AAATTGATTCTCTGGGGGAAAGCTTCAAACCACTTCAGCCATTAAAATGT  1092
      ||||||| |||||||||| ||||| ||| |  ||||||||| | ||||||
seq2  AAATTGA-TCTCTGGGGG-AAGCTCCAACCACCTTCAGCCA-TGAAATGT  1095

seq1  GGC-TGGGCATATTAGGAAAGCAAGCGGGGGTGAGGCAGAGTGTGGGGAA  1141
      ||| ||| ||||||||  |||||   |||||||||||  | |||| || |
seq2  GGCTTGGACATATTAG--AAGCA--TGGGGGTGAGGCCAAATGTGTGGGA  1141

seq1  TTCAAGGGGAGCTGGGAAAGAACTCGATCCAGAAAATGCC  1181
      |||||||||| |||   ||||||||||| ||||| |||||
seq2  TTCAAGGGGA-CTG---AAGAACTCGATTCAGAACATGCC  1177