BAC Information

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BAC

Clone NameB6Ng01-255B23
Chromosome18 (Build37)
Map Location 83,795,001 - 83,796,150
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp236, LOC100039563, Zfp516, LOC100041001, 4921531P14Rik, LOC665284
Downstream geneTshz1, Zadh2, LOC669856, Zfp407, Cndp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255B23.bB6Ng01-255B23.g
ACCGA061407GA061408
length1,1861,146
definitionB6Ng01-255B23.b B6Ng01-255B23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagtccactagcaaacaccaaacgtgaatcatcagctgcagcct
ggtccactcagcaaacactaaacatgaatcaatagcagtggctccatcca
gaagaaagttcaaggctccatggatcagcatgagtccaacaaagcagcga
gaagcagccagaacagcaccagaagcctaatgaggaccagtaaagagtgt
caaggcaaaccagtgcaagagcgtcatccactgtctgtctgccgggttat
acttataccctttctaaacaccaggtgctcgcccagtgtctgctccagca
aaacatcccatgccctctcatcaggcaactttcagaaaacacaagtttgc
ttcagcaaaacatcctatctgaaaaaagtcacgacacaactgagtttcca
attgttgggagctcaaagaattctcacctgaggaataccgaatggcagag
aagcacctgaaaaaatgttcaacatccttaatcatcagggaaatgcaaat
caaaacaaccctgagattccacctcacaccagtcagaatggctaagatga
aaaattcaggtgacagcagatgctggcgtggatgtggagaaagaggaaca
ctcctccattgttggtgggattgcaggcttgtacaaccactctggaaatc
agtctggcggttcctcagaaaattggacatagtactaccggaggatccag
caatacctctcctgggcatatatccagaagatgccccaacagttaagaag
aacacatgttccactatgttcatagcagccttatttataatagccagaag
ctggaaagaacccagatgcccctcaacagaggaatggatacagaaaatgt
ggtacatctacacaatggagtactactcagctattaaaaagaatgaattt
atgaaattcctagccaaatggatggacctggagggcatcatcctgagtga
ggtaacacattcacaaaggaactcacacaatatgtactcactgataagtg
gatattagccccaaacctagataccagataataagatacaatttgctaaa
cacatgaactcagagatgagactgaagtgtgacactatgccctcctagaa
tggaacaaaacaccatgcaggaattacagaaacaagctcgaggctgaatg
aagattgacctgtgtaagaaacctgccataatttcg
gaattctcttctctccacccgtctatccatcctgcctcacaaactcacat
gtcagggaagaaaagcgaagaggttcactaactatctcctttccctattt
gtaagcacacaactgagaggagctgtgtgtgaaatcattcctacatttca
gatggcggaggggtccgtctcggccatgaaaggcattgggtattttattc
tctgcatagaggcacccacacagtgtgtgaaaccgtcctcacatttgaag
gtggctttaggtctgagcgtgtcagcctttagggtgacctcagtatgtca
gccttttcaggaagcactcacactattgtgcatgtggggcttttctatgt
cagctctccaacatagactgcttcatggactttagggatgcgaacacaca
agtaaagttatttaaacccaaccttgactcttgggggagacttttcctag
aattgacacacaatataaatgttgaaaagtaatagatttaaaaaaaaaca
acaacagttagcatcttgaaggagaaatacacagctccttattcctcaga
cataaaccacaccgtggaaattgcgtgcattcgccagccggtgtgactta
gtgacgacaactgcccgacgtttctctctttttaaaatcgctgatagatg
gggcaaggagatttatcactttttaattaagctcatgtcaacccgtgaag
tttatttcagtacaaatctgttgaccaaagtctttttgaagaaactgctc
ctgttgaggcttaagtattcatgggaaatctcacagttagtgtgactgct
ccgtggacacagccaccacatttcatccagtcctggcagagtggttttct
atttgcccaacatatttatggaaatgagttcaagatcaatctttgttatt
ttgtattccatagcagctcactgccctgaggggaaagaagaagaattctg
acataaatcttacagactccacctgaaccccaaatcccagcacagtgcac
ccacaacccaactctgaccccagacttagcttcagagtcgctgatatgtc
cagcagcaccactgataatagaaatcaaattaaagctgcagaatgccgtc
ttaatgaacaaggttccatgtcactagaagaaataaccttgaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_83795001_83796150
seq2: B6Ng01-255B23.g_64_1209 (reverse)

seq1  CCATTCAAGGTTTATTC-TCTAGTGACATGG-ACCCTGGTCATAAGGACC  48
      ||||||||||||  ||| ||||||||||||| ||| || |||| | ||| 
seq2  CCATTCAAGGTTATTTCTTCTAGTGACATGGAACCTTGTTCATTAAGACG  50

seq1  GCAATCTGCAGCTTTAATTTGATTTCTATTTAATCAGTGGTGCTGCTGGA  98
      ||| ||||||||||||||||||||||||||  ||||||||||||||||||
seq2  GCATTCTGCAGCTTTAATTTGATTTCTATT--ATCAGTGGTGCTGCTGGA  98

seq1  CATATTCAGCGGACTCTGAAGGCTAAGTCTGGGGTCAGAGTTGGGTTGTG  148
      |||| ||||| ||||||||| |||||||||||||||||||||||||||||
seq2  CATA-TCAGC-GACTCTGAA-GCTAAGTCTGGGGTCAGAGTTGGGTTGTG  145

seq1  GGTGCACTGTGCTGGGATTTGGGGTTCAGGTGGAGTCTTGTAAGATTTAT  198
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGTGCACTGTGCTGGGATTTGGGGTTCAGGTGGAGTC-TGTAAGATTTAT  194

seq1  GTCAGAATTCTTCTTCTTTCCCCTCAGGGCAGTGAGCTGCTATGGAATAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAATTCTTCTTCTTTCCCCTCAGGGCAGTGAGCTGCTATGGAATAC  244

seq1  AAAATAACAAAGATTGATCTTGAACTCATTTCCATAAATATGTTGGGCAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACAAAGATTGATCTTGAACTCATTTCCATAAATATGTTGGGCAA  294

seq1  ATAGAAAACCACTCTGCCAGGACTGGATGAAATGTGGTGGCTGTGTCCAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAACCACTCTGCCAGGACTGGATGAAATGTGGTGGCTGTGTCCAC  344

seq1  GGAGCAGTCACACTAACTGTGAGATTTCCCATGAATACTTAAGCCTCAAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGTCACACTAACTGTGAGATTTCCCATGAATACTTAAGCCTCAAC  394

seq1  AGGGGCAGTTTCTTCAAAAAGACTTTGGTCAACAGATTTGTACTGAAATA  448
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCAGTTTCTTCAAAAAGACTTTGGTCAACAGATTTGTACTGAAATA  444

seq1  AACTTCACGGGTTGACATGAGCTTAATTAAAAAGTGATAAATCTCCTTGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCACGGGTTGACATGAGCTTAATTAAAAAGTGATAAATCTCCTTGC  494

seq1  CCCATCTATCAGCGATTTTAAAAAGAGAGAAACGTCGGGCAGTTGTCGTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTATCAGCGATTTTAAAAAGAGAGAAACGTCGGGCAGTTGTCGTC  544

seq1  ACTAAGTCACACCGGCTGGCGAATGCACGCAATTTCCACGGTGTGGTTTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGTCACACCGGCTGGCGAATGCACGCAATTTCCACGGTGTGGTTTA  594

seq1  TGTCTGAGGAATAAGGAGCTGTGTATTTCTCCTTCAAGATGCTAACTGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAGGAATAAGGAGCTGTGTATTTCTCCTTCAAGATGCTAACTGTT  644

seq1  GTTGTTTTTTTTTAAATCTATTACTTTTCAACATTTATATTGTGTGTCAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTTTTTTAAATCTATTACTTTTCAACATTTATATTGTGTGTCAA  694

seq1  TTCTAGGAAAAGTCTCCCCCAAGAGTCAAGGTTGGGTTTAAATAACTTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGAAAAGTCTCCCCCAAGAGTCAAGGTTGGGTTTAAATAACTTTA  744

seq1  CTTGTGTGTTCGCATCCCTAAAGTCCATGAAGCAGTCTATGTTGGAGAGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTGTTCGCATCCCTAAAGTCCATGAAGCAGTCTATGTTGGAGAGC  794

seq1  TGACATAGAAAAGCCCCACATGCACAATAGTGTGAGTGCTTCCTGAAAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATAGAAAAGCCCCACATGCACAATAGTGTGAGTGCTTCCTGAAAAG  844

seq1  GCTGACATACTGAGGTCACCCTAAAGGCTGACACGCTCAGACCTAAAGCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACATACTGAGGTCACCCTAAAGGCTGACACGCTCAGACCTAAAGCC  894

seq1  ACCTTCAAATGTGAGGACGGTTTCACACACTGTGTGGGTGCCTCTATGCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCAAATGTGAGGACGGTTTCACACACTGTGTGGGTGCCTCTATGCA  944

seq1  GAGAATAAAATACCCAATGCCTTTCATGGCCGAGACGGACCCCTCCGCCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATAAAATACCCAATGCCTTTCATGGCCGAGACGGACCCCTCCGCCA  994

seq1  TCTGAAATGTAGGAATGATTTCACACACAGCTCCTCTCAGTTGTGTGCTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAATGTAGGAATGATTTCACACACAGCTCCTCTCAGTTGTGTGCTT  1044

seq1  ACAAATAGGGAAAGGAGATAGTTAGTGAACCTCTTCGCTTTTCTTCCCTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAGGGAAAGGAGATAGTTAGTGAACCTCTTCGCTTTTCTTCCCTG  1094

seq1  ACATGTGAGTTTGTGAGGCAGGATGGATAGACGGGTGGAGAGAAGAGAAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGAGTTTGTGAGGCAGGATGGATAGACGGGTGGAGAGAAGAGAAT  1144

seq1  TC  1150
      ||
seq2  TC  1146