BAC Information

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BAC

Clone NameB6Ng01-259A08
Chromosome18 (Build37)
Map Location 86,445,812 - 86,446,981
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665382, LOC545269, LOC545270, LOC665402
Downstream geneNeto1, Cbln2, LOC100039872, LOC100039881, LOC665437, LOC435580, LOC546719, LOC383318
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259A08.bB6Ng01-259A08.g
ACCGA064312GA064313
length1,1781,099
definitionB6Ng01-259A08.b B6Ng01-259A08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacatttgtattgctatgaagttaaagtacaaactcagtgctggt
atgactaatacactattatgaaatatttctaaactctttaaaattaaaaa
ctaggttgatattttatacatagatggaagatatctaaactaaagttgta
gcatttgttttttaaagaccctatattgttttattatttaataagcagtc
aaatttattttgttttattatatcatcttcatatgaaaaaacatagcttc
ctaaatgaataaagcatgaatttctgtcagttgtatcaatgatatattgg
tatctcatgttgaaatgtagtcatactgtacagtgtgatcacttaatgat
gtgatgcagtctgagacctttgtcatcaggcattattaggcaaacccaga
ctgggaagaaaccataagcatttggtgccttatcttgatttccgggctca
tgtttgtcctgggtgtatctaagttagcactcctactttggaatcactga
acaaccagaagctggatcatggacagaacagctagagatgaactctgctg
ctgagccccttgtccaagcatcctttcctattcagagagagacagggtta
tgtggcgataagggctagaagaattttccttgtttgcagatgttactagc
taacacagaccaaagataaacacagaacggattacagttttggaaatgca
tggcatggttatcgtgttttttgtttttctcttagaaaatgctttgttat
cactctgcaattagtgatatttactaatttcttaggaaggtttagaatgc
ctcagatatttttttaaaagtcacacttaattcatattctttaaataaac
ttacttttcctattaagtctaacagcccatcctgtgtcaaaatcgcctgc
ctattttattttatttttacttctattataaagaattgttaactttattc
ttcataataatattgctgtaagtctccaaagtatttatggtaaactaaca
caacacattaaacttataataaatggagagcatagaagcttcccacaaca
aaacaagaggaaaattggaagcatgttcttgaaataggacattattctat
tatagtgctttactattcctatcctgcataaaccacacaacgtaccagtc
ttagtttaaaacaaatacataatgttat

gaattctttgtttagctctgagccccatttttaaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatttgatttatgatagggaaatatcctttcccaatctgttggtggcct
ttttgtcttattgatggtgtcttttgccttgcagaagctttgcagtttca
tgaagtccaatttttgtcaattttcgatcttacagcacaagccattgctg
ttctattcagggattttttcccctgtgcccatatcttccaggttttttct
tactttctcctgtataagtttcagtgtctctggtttcatgtggagctcct
tgatccacttagatttaacctgagtacaaggagataggagtggataaatt
cgcattcttctacataataaccaccacttgtgccagcaccattttttgaa
aatgctgtcctttttccactggatggtttttgctcccttgtcaaagatca
agagaccataggtgtatgggtacatttcggatcttcgattctattccact
ggtctacaagtctgtcgctctaccaataccatgccctttttatcacaatt
gctttgtagtaacgctttaggtcaggcatggtaattccagcagagttttt
ttttttttttttttttttaaatccttgagcagagtttttgctatcctagg
ttttttgttattccagatgaatttgcagattgccctttctaattcattga
aaaaattgagtttgggattttgatgggggattgcaattgaatcttttaaa
ttgctttttggcaagatagccatattttatctatatttgattactggcca
attccatgaggcatggggagatctttcccatctttctgagatctttcttt
taacttctttcttcagagaacttgatgttcttatcatacagatctttcac
ttcttagtaagccgtcccacccaaggtatttatattttttggtgacttat
tgagaaaggggtggtttccctaaatctcttcctccacccggttatccctc
ttgtacagaaaagcccttggactggttttgagtaattttatatccacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_86445812_86446981
seq2: B6Ng01-259A08.b_48_1225 (reverse)

seq1  ATAACATATTGTATT--GTTTAAACTAAGACTGGTACG-TGTGTG--TTA  45
      |||||||  ||||||   |||||||||||||||||||| ||||||  |||
seq2  ATAACATTATGTATTTGTTTTAAACTAAGACTGGTACGTTGTGTGGTTTA  50

seq1  TGCAGGATAGG-ATAGTAAAGCACTATAATAG-ATAATGTCCTATTTC-A  92
      ||||||||||| |||||||||||||||||||| ||||||||||||||| |
seq2  TGCAGGATAGGAATAGTAAAGCACTATAATAGAATAATGTCCTATTTCAA  100

seq1  GAACATGCTTCCAAATTTTCCTC-TGTTTTGTTGTGGGAAGCTTCTATGC  141
      |||||||||||| |||||||||| ||||||||||||||||||||||||||
seq2  GAACATGCTTCC-AATTTTCCTCTTGTTTTGTTGTGGGAAGCTTCTATGC  149

seq1  TCTCCATTTATTAT-AGTTTATTGTGTTGTTGTTAGTTTACCATAAATAC  190
      |||||||||||||| |||||| ||||||| ||||||||||||||||||||
seq2  TCTCCATTTATTATAAGTTTAATGTGTTG-TGTTAGTTTACCATAAATAC  198

seq1  TTTGGAGACTTACAGCAATATTATTATGAAGAATAAAGTTAACAATTCTT  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGACTTACAGCAATATTATTATGAAGAATAAAGTTAACAATTCTT  248

seq1  TATAATAGAAGTAAAAATAAAATAAAATAGGCAGGCGATTTTGACACAGG  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAGAAGTAAAAATAAAATAAAATAGGCAGGCGATTTTGACACAGG  298

seq1  ATGGGCTGTTAGACTTAATAGGAAAAGTAAGTTTATTTAAAGAATATGAA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTGTTAGACTTAATAGGAAAAGTAAGTTTATTTAAAGAATATGAA  348

seq1  TTAAGTGTGACTTTTAAAAAAATATCTGAGGCATTCTAAACCTTCCTAAG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGTGACTTTTAAAAAAATATCTGAGGCATTCTAAACCTTCCTAAG  398

seq1  AAATTAGTAAATATCACTAATTGCAGAGTGATAACAAAGCATTTTCTAAG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGTAAATATCACTAATTGCAGAGTGATAACAAAGCATTTTCTAAG  448

seq1  AGAAAAACAAAAAACACGATAACCATGCCATGCATTTCCAAAACTGTAAT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACAAAAAACACGATAACCATGCCATGCATTTCCAAAACTGTAAT  498

seq1  CCGTTCTGTGTTTATCTTTGGTCTGTGTTAGCTAGTAACATCTGCAAACA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTCTGTGTTTATCTTTGGTCTGTGTTAGCTAGTAACATCTGCAAACA  548

seq1  AGGAAAATTCTTCTAGCCCTTATCGCCACATAACCCTGTCTCTCTCTGAA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAATTCTTCTAGCCCTTATCGCCACATAACCCTGTCTCTCTCTGAA  598

seq1  TAGGAAAGGATGCTTGGACAAGGGGCTCAGCAGCAGAGTTCATCTCTAGC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAAGGATGCTTGGACAAGGGGCTCAGCAGCAGAGTTCATCTCTAGC  648

seq1  TGTTCTGTCCATGATCCAGCTTCTGGTTGTTCAGTGATTCCAAAGTAGGA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGTCCATGATCCAGCTTCTGGTTGTTCAGTGATTCCAAAGTAGGA  698

seq1  GTGCTAACTTAGATACACCCAGGACAAACATGAGCCCGGAAATCAAGATA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAACTTAGATACACCCAGGACAAACATGAGCCCGGAAATCAAGATA  748

seq1  AGGCACCAAATGCTTATGGTTTCTTCCCAGTCTGGGTTTGCCTAATAATG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACCAAATGCTTATGGTTTCTTCCCAGTCTGGGTTTGCCTAATAATG  798

seq1  CCTGATGACAAAGGTCTCAGACTGCATCACATCATTAAGTGATCACACTG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGACAAAGGTCTCAGACTGCATCACATCATTAAGTGATCACACTG  848

seq1  TACAGTATGACTACATTTCAACATGAGATACCAATATATCATTGATACAA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTATGACTACATTTCAACATGAGATACCAATATATCATTGATACAA  898

seq1  CTGACAGAAATTCATGCTTTATTCATTTAGGAAGCTATGTTTTTTCATAT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGAAATTCATGCTTTATTCATTTAGGAAGCTATGTTTTTTCATAT  948

seq1  GAAGATGATATAATAAAACAAAATAAATTTGACTGCTTATTAAATAATAA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGATATAATAAAACAAAATAAATTTGACTGCTTATTAAATAATAA  998

seq1  AACAATATAGGGTCTTTAAAAAACAAATGCTACAACTTTAGTTTAGATAT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATATAGGGTCTTTAAAAAACAAATGCTACAACTTTAGTTTAGATAT  1048

seq1  CTTCCATCTATGTATAAAATATCAACCTAGTTTTTAATTTTAAAGAGTTT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATCTATGTATAAAATATCAACCTAGTTTTTAATTTTAAAGAGTTT  1098

seq1  AGAAATATTTCATAATAGTGTATTAGTCATACCAGCACTGAGTTTGTACT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATTTCATAATAGTGTATTAGTCATACCAGCACTGAGTTTGTACT  1148

seq1  TTAACTTCATAGCAATACAAATGTGAATTC  1170
      ||||||||||||||||||||||||||||||
seq2  TTAACTTCATAGCAATACAAATGTGAATTC  1178


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