BAC Information

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BAC

Clone NameB6Ng01-261E24
Chromosome18 (Build37)
Map Location 22,496,811 - 22,630,896
singlet/doubletdoublet
Overlap geneLOC100040547, Asxl3
Upstream geneLOC225264, Klhl14, 4921528I01Rik, LOC546708
Downstream geneNol4, LOC100040579, LOC665797, Dtna
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261E24.bB6Ng01-261E24.g
ACCGA066012GA066013
length1,0871,127
definitionB6Ng01-261E24.b B6Ng01-261E24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,496,811 - 22,497,900)(22,629,778 - 22,630,896)
sequence
gaattcttctgttacaaaaggacttgtatctcccatcctttcaatccatc
cttgtaaaagtagcaaaatagctttatattgccctttgagctgtcaatgc
tatggatacaataaggaggaagctactgtacaacttaaaactgcagacag
tgggaaaattatcaggatgaattacttgttggcgattcctctgaagttct
cttttgtgaagtctcaatcacaaaagctgtgcatttgttcaacacaaagt
gaagcaggccataaccaacatgccattgacctgtgtgtagcatctgagat
ttaagtgtgaatcagaattctcgtcttctttctgaactcagaatgttctt
ttcacacaaagatgaatttagaagcacgtgattttccttcttagctagta
agagtgggattgaattagagtttacctagagaaatgtaatttgtagctct
gaaaataagcaaaaagctctgttagactgcagtgttgaaactcgaatcac
atggcatatgcataaaaagatactatcagccagagctctatttacatttt
ctaagtggttcctttttcttttttctttttttcctttttccttttttttt
ctttcattttgtataaactaatgagagccgctgttagggcgtatgtgtaa
cccttttgtgtaatggattaagtgtgagcctgttaaacaccaggccataa
atcacactgtgttctctatgcctaattaagggtttaaagggggaaggtaa
attcttgaatgaagggccctactcagaagctgggtttgttattgccctaa
ggaagcagaaagataaaaacagggaaaaaagggagacagagagagaaaga
aagagcaatttaggaaagtgcaaaagaagaaagctatgaacatattttag
cttctgtttccccaattctctcccatttaaagaacactttgggcactaag
actccagagccatcatgaaaatgcccttatatttagtggagcgaaggctg
acagtaaaacctgactagagataaaaacaagtctcaaacaccctattagc
taaaactgaactgacactggttatggatgaagatgaa

gaattcattgtttataaggtagaaagcaacatctagagacagatgttgct
gtgtgctgtgtactgattacaaaccagattcactgttctctacatgatgc
tcattgaagccaatacagccttaaagaactgtgcacacacatgtgtaggg
gcatgtgcattttgtgacaacatcatagacctggaagaagcaacacccca
agagtgaagaacacatctttcatgaagtctagatttctgggttccaaact
acactaaagaatatcctgagccgggcggtggtggcgcacgcctttaatcc
cagcacttgggaggcagaggcaggcagatttctgagttcgaggccagcct
ggtttacagagtgagttccagggcagccagggctacacagagaaaccctg
tcttgaaaaaacaaaacaaaagaaacaaacaaacaaaaagaatatcctgg
tttcttggtgagacagttcatcctggactggtaccaagaatgtacaaaag
aagatcagaataccttgaccttggtgtgcctcatggcaaagaagagagag
ctcaggacaagtctttgtgtgtaggagccacctttaatggtctcctgctg
cctggtgtgggacaatctaagcataataacctattataaacaaatataaa
ttagtaagtggatgtttgaagattaacaagatatttacatggctaaaatt
aacttcctaaaaatactatttaatttcaaagagggaaggagtagcttttc
attagtgaaatggagcagcaccaggcaaggacacagattcattcaccatc
ctcctcccaaggaccgtgatttgattctgatcaggaaaatactataccaa
acccagactggcttacagtcttcaacgttgtcatggtaagactaatgtcc
attagcagcaacacattgaatagagtcacagatcttacatgatctcgttg
atcaaagggaatctttgctgggacctcgtggctaaatttgggctgggctt
ctcagatcacaaagaaaccattacttctagttctttgggtatccactgct
ttacgctttatggaaaagaagcctataacttctgtgtttaatcataacat
tacatatcaaatgtcatgatttttatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_22496811_22497900
seq2: B6Ng01-261E24.b_44_1130

seq1  GAATTCTTCTGTTACAAAAGGACTTGTATCTCCCATCCTTTCAATCCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGTTACAAAAGGACTTGTATCTCCCATCCTTTCAATCCATC  50

seq1  CTTGTAAAAGTAGCAAAATAGCTTTATATTGCCCTTTGAGCTGTCAATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAAAAGTAGCAAAATAGCTTTATATTGCCCTTTGAGCTGTCAATGC  100

seq1  TATGGATACAATAAGGAGGAAGCTACTGTACAACTTAAAACTGCAGACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGATACAATAAGGAGGAAGCTACTGTACAACTTAAAACTGCAGACAG  150

seq1  TGGGAAAATTATCAGGATGAATTACTTGTTGGCGATTCCTCTGAAGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAATTATCAGGATGAATTACTTGTTGGCGATTCCTCTGAAGTTCT  200

seq1  CTTTTGTGAAGTCTCAATCACAAAAGCTGTGCATTTGTTCAACACAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTGAAGTCTCAATCACAAAAGCTGTGCATTTGTTCAACACAAAGT  250

seq1  GAAGCAGGCCATAACCAACATGCCATTGACCTGTGTGTAGCATCTGAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGGCCATAACCAACATGCCATTGACCTGTGTGTAGCATCTGAGAT  300

seq1  TTAAGTGTGAATCAGAATTCTCGTCTTCTTTCTGAACTCAGAATGTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGTGAATCAGAATTCTCGTCTTCTTTCTGAACTCAGAATGTTCTT  350

seq1  TTCACACAAAGATGAATTTAGAAGCACGTGATTTTCCTTCTTAGCTAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACAAAGATGAATTTAGAAGCACGTGATTTTCCTTCTTAGCTAGTA  400

seq1  AGAGTGGGATTGAATTAGAGTTTACCTAGAGAAATGTAATTTGTAGCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGGATTGAATTAGAGTTTACCTAGAGAAATGTAATTTGTAGCTCT  450

seq1  GAAAATAAGCAAAAAGCTCTGTTAGACTGCAGTGTTGAAACTCGAATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAGCAAAAAGCTCTGTTAGACTGCAGTGTTGAAACTCGAATCAC  500

seq1  ATGGCATATGCATAAAAAGATACTATCAGCCAGAGCTCTATTTACATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATATGCATAAAAAGATACTATCAGCCAGAGCTCTATTTACATTTT  550

seq1  CTAAGTGGTTCCTTTTTCTTTTTTCTTTTTTTCCTTTTTCCTTTTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGGTTCCTTTTTCTTTTTTCTTTTTTTCCTTTTTCCTTTTTTTTT  600

seq1  CTTTCATTTTGTATAAACTAATGAGAGCCGCTGTTAGGGCGTATGTGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATTTTGTATAAACTAATGAGAGCCGCTGTTAGGGCGTATGTGTAA  650

seq1  CCCTTTTGTGTAATGGATTAAGTGTGAGCCTGTTAAACACCAGGCCATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTGTGTAATGGATTAAGTGTGAGCCTGTTAAACACCAGGCCATAA  700

seq1  ATCACACTGTGTTCTCTATGCCTAATTAAGGGTTTAAAGGGGGAAGGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACTGTGTTCTCTATGCCTAATTAAGGGTTTAAAGGGGGAAGGTAA  750

seq1  ATTCTTGAATGAAGGGCCCTACTCAGAAGCTGGGTTTGTTATTGCCCTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGAATGAAGGGCCCTACTCAGAAGCTGGGTTTGTTATTGCCCTAA  800

seq1  GGAAGCAGAAAGATAAAAACAGG--AAAAAGGGAGACAGAGAGAGAAAGA  848
      |||||||||||||||||||||||  |||||||||||||||||||||||||
seq2  GGAAGCAGAAAGATAAAAACAGGGAAAAAAGGGAGACAGAGAGAGAAAGA  850

seq1  AAGAGCAATTTAGGAAAGTGCAAAAGAAGAAAGCTATGAACATATTTTAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAATTTAGGAAAGTGCAAAAGAAGAAAGCTATGAACATATTTTAG  900

seq1  CTTCTGTTTCCCCAATTCTCTCCCATTTAAAGAACACTTT-GGCACTAAG  947
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTTCTGTTTCCCCAATTCTCTCCCATTTAAAGAACACTTTGGGCACTAAG  950

seq1  ACTCCAGAGCCATCATGAAAATGCCCTTATAATTAGTGGAGCGAAGGCTG  997
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACTCCAGAGCCATCATGAAAATGCCCTTATATTTAGTGGAGCGAAGGCTG  1000

seq1  ACAGTAAAACCTGACTAGAGAATTAAAAACAAGTCTCAAACACCCCTAAT  1047
      |||||||||||||||||||||  ||||||||||||||||||||||   ||
seq2  ACAGTAAAACCTGACTAGAGA--TAAAAACAAGTCTCAAACACCC--TAT  1046

seq1  TAGCTAAAAACTGAAACTGACACTGGTTAATGATGAAGATGAA  1090
      ||||| ||||||| |||||||||||||||  ||||||||||||
seq2  TAGCT-AAAACTG-AACTGACACTGGTTATGGATGAAGATGAA  1087


seq1: chr18_22629778_22630896
seq2: B6Ng01-261E24.g_67_1193 (reverse)

seq1  GATAAAAATACCATGACATATGATATGT-ATG-TATGATAAAACACAGAA  48
      |||||||||  |||||||| |||||||| ||| |||||| ||||||||||
seq2  GATAAAAAT--CATGACATTTGATATGTAATGTTATGATTAAACACAGAA  48

seq1  GTTATAGCCTTCCTTTCCAT-AAGCGTAAAGCAGTGGATA-CCAAAG-AC  95
      ||||||| |||| ||||||| ||||||||||||||||||| |||||| ||
seq2  GTTATAGGCTTCTTTTCCATAAAGCGTAAAGCAGTGGATACCCAAAGAAC  98

seq1  TAGAAGTAATGGTTTCTTTGTGATCTGAGA--GCCAG-CCAAATTTAGCC  142
      ||||||||||||||||||||||||||||||   |||| ||||||||||||
seq2  TAGAAGTAATGGTTTCTTTGTGATCTGAGAAGCCCAGCCCAAATTTAGCC  148

seq1  ACGA-GTCCCAGC-AAGA-TCCCTTTGATCAACGAGGTCATGTAAAGATC  189
      |||| |||||||| |||| ||||||||||||||||| |||||| ||||||
seq2  ACGAGGTCCCAGCAAAGATTCCCTTTGATCAACGAGATCATGT-AAGATC  197

seq1  TGTGACTCTATTCAATGTTGTTGCTGCTAATGGACATTAGTCTTACCATG  239
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGTGACTCTATTCAATG-TGTTGCTGCTAATGGACATTAGTCTTACCATG  246

seq1  ACAACGTTGAAGACTGTAAGCCAGTCTGGG-TTGGTATAGTATTTTCCTG  288
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACAACGTTGAAGACTGTAAGCCAGTCTGGGTTTGGTATAGTATTTTCCTG  296

seq1  ATCAGAATCAAATCACGGTCCTTGGGAGGAGGATGGTGAATGAATCTGTG  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAATCAAATCACGGTCCTTGGGAGGAGGATGGTGAATGAATCTGTG  346

seq1  TCCTTGCCTGGTGCTGCTCCATTTCACTAATGAAAAGCTACTCCTTCCCT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGCCTGGTGCTGCTCCATTTCACTAATGAAAAGCTACTCCTTCCCT  396

seq1  CTTTGAAATTAAATAGTATTTTTAGGAAGTTAATTTTAGCCATGTAAATA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAATTAAATAGTATTTTTAGGAAGTTAATTTTAGCCATGTAAATA  446

seq1  TCTTGTTAATCTTCAAACATCCACTTACTAATTTATATTTGTTTATAATA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTAATCTTCAAACATCCACTTACTAATTTATATTTGTTTATAATA  496

seq1  GGTTATTATGCTTAGATTGTCCCACACCAGGCAGCAGGAGACCATTAAAG  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTATGCTTAGATTGTCCCACACCAGGCAGCAGGAGACCATTAAAG  546

seq1  GTGGCTCCTACACACAAAGACTTGTCCTGAGCTCTCTCTTCTTTGCCATG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCCTACACACAAAGACTTGTCCTGAGCTCTCTCTTCTTTGCCATG  596

seq1  AGGCACACCAAGGTCAAGGTATTCTGATCTTCTTTTGTACATTCTTGGTA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACACCAAGGTCAAGGTATTCTGATCTTCTTTTGTACATTCTTGGTA  646

seq1  CCAGTCCAGGATGAACTGTCTCACCAAGAAACCAGGATATTCTTTTTGTT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCCAGGATGAACTGTCTCACCAAGAAACCAGGATATTCTTTTTGTT  696

seq1  TGTTTGTTTCTTTTGTTTTGTTTTTTCAAGACAGGGTTTCTCTGTGTAGC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTCTTTTGTTTTGTTTTTTCAAGACAGGGTTTCTCTGTGTAGC  746

seq1  CCTGGCTGCCCTGGAACTCACTCTGTAAACCAGGCTGGCCTCGAACTCAG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGCCCTGGAACTCACTCTGTAAACCAGGCTGGCCTCGAACTCAG  796

seq1  AAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCA  846

seq1  CCACCGCCCGGCTCAGGATATTCTTTAGTGTAGTTTGGAACCCAGAAATC  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCGCCCGGCTCAGGATATTCTTTAGTGTAGTTTGGAACCCAGAAATC  896

seq1  TAGACTTCATGAAAGATGTGTTCTTCACTCTTGGGGTGTTGCTTCTTCCA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTCATGAAAGATGTGTTCTTCACTCTTGGGGTGTTGCTTCTTCCA  946

seq1  GGTCTATGATGTTGTCACAAAATGCACATGCCCCTACACATGTGTGTGCA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTATGATGTTGTCACAAAATGCACATGCCCCTACACATGTGTGTGCA  996

seq1  CAGTTCTTTAAGGCTGTATTGGCTTCAATGAGCATCATGTAGAGAACAGT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTTTAAGGCTGTATTGGCTTCAATGAGCATCATGTAGAGAACAGT  1046

seq1  GAATCTGGTTTGTAATCAGTACACAGCACACAGCAACATCTGTCTCTAGA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGGTTTGTAATCAGTACACAGCACACAGCAACATCTGTCTCTAGA  1096

seq1  TGTTGCTTTCTACCTTATAAACAATGAATTC  1119
      |||||||||||||||||||||||||||||||
seq2  TGTTGCTTTCTACCTTATAAACAATGAATTC  1127


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