BAC Information

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BAC

Clone NameB6Ng01-263E13
Chromosome18 (Build37)
Map Location 90,100,306 - 90,101,426
singlet/doubletsinglet
Overlap genenone
Upstream geneRttn, Cd226, Dok6
Downstream geneLOC383320, LOC620693, Eif3s6-ps2, LOC665526, Txndc10, LOC666779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263E13.bB6Ng01-263E13.g
ACCGA067492GA067493
length1,1111,183
definitionB6Ng01-263E13.b B6Ng01-263E13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctactaataatttggttctttcaacatttattaaggatataaagt
tagtattgcagcagatttttcatgaatttgaataattttattgtttaaat
gttaaaaaaaaaacacattgtttttttttcccccagggggcagaagaaaa
tccaagtccaatctcatttacacaaatagtaaagatatttggcacaatag
cagtaatttccttaaaaatataatagagaacttttattcctttaatagca
aagcacaaaaaaaaccttaacttcagtactaggaactgagagaaaatgtc
tagaaataatggtatagcaatatgctgcagacagaaaaaaacaaaatctt
gccaccaacaatacagaaatcttccttcatcctttatttggattgtctgc
ccttaaatgcttccacatagttgactcacattgatcataaggtcaaggct
tagaattgagaaaaatacagataacaaataagcagtagaaatggaaataa
atttaccatatagcttacctaatccatttataagcaataaccacagccag
gtcactaaagcattcaagtagctccaaacaattaggtagagacatttata
gaaagtatatggaaattatgaggaagcagaggtccagacatatgtgtact
atttggttaatgaaagttttaattaaatgcaattggaaatagaggaaaag
gaagacactatttggaaacaaatttgtattttcttgtgcatagagaaatg
catatagctatttaatcatttgcctggaagaactatggtagataaatttg
gataattaatatgttattatttctctcaaattttcatacatataaacata
acaacccaatactatagtataactgaaagttttcagaaaagtatgctgct
gcgactatgtatatctagatatagaattaagttcataaatgatttagatt
atttcatcatgatctgggttcatatgattttcaaaagtcatagatatgat
ttatgatgagatgactgatgacgagttatacaattttaggtagagtctca
ctagacctaccacaacaaacacttgtgtgatctccttgttcatttcacat
tactgattctt
gaattctttgtttcgctctttgctccatttttttaatggggatatttgat
tttctggattccaccttcttgagttctttatatatatttgatattagtcc
cctatctgatttaggataggtaaagatcctttcccaatctgttggtggcc
ttttttgtcttattgacggtgtcttttgcattacagaagcttttcaatct
tatgaggttccatttgtctattctcaatcttacagcacaagccattgctg
ttctatttaggaatttttcccctgtgcccatatctttcaggttttccccc
accccactttctcctctataactttcactgtctgtggttttatgtggagt
tccttgatccacttatatttgatcttagtacaaggagataggaattaatc
aaatcacattcttctatatgttaaccgccagttgtgccagcatcatttgt
tgaaaatgctgtctttttttccactggatggttttagctcccttgtcaaa
gatcaagtggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttatctttcgctataccagtaccatgcagtttttatcaaaattg
ctctatagtacagctttaaatcaggcatggtgattccaccagcggttctt
ttattcttgagaagagtttttggtatcctaggtttttttgttattccaga
tgaatttgcagattgacctttctaattcattgaagaattgagttggaatt
ttgatggggattgcattgaatctgttgtatgttgatcctgcctatctatg
agcatgtgagatctttccattttctgagatcttctttaatttctttcttc
agagacttgaagttctaatcatacaaatctttcacttccttagttagagt
cacaccaaggtattttatattatttgtgactattgagaaggtgttgttcc
ctaatttctttctcagcctgttttatctttgtgtacagaaaggccattga
cttgtttgagtatttatatccagctactgaatgaagctgttatcagctag
gattctctggtgattttaaggtcactatataactatcattcaatctgcaa
agtgaattttgactcttctttcctattgattcctgaattcaattgttgca
ttgccctcgctagagacctccagatacaagtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_90100306_90101426
seq2: B6Ng01-263E13.b_44_1154

seq1  GAATTCTACTAATAATTTGGTTCTTTCAACATTTATTAAGGATATAAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTAATAATTTGGTTCTTTCAACATTTATTAAGGATATAAAGT  50

seq1  TAGTATTGCAGCAGATTTTTCATGAATTTGAATAATTTTATTGTTTAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTGCAGCAGATTTTTCATGAATTTGAATAATTTTATTGTTTAAAT  100

seq1  GTTAAAAAAAAAACACATTGTTTTTTTTTCCCCCAGGGGGCAGAAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAAAAAAAACACATTGTTTTTTTTTCCCCCAGGGGGCAGAAGAAAA  150

seq1  TCCAAGTCCAATCTCATTTACACAAATAGTAAAGATATTTGGCACAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTCCAATCTCATTTACACAAATAGTAAAGATATTTGGCACAATAG  200

seq1  CAGTAATTTCCTTAAAAATATAATAGAGAACTTTTATTCCTTTAATAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATTTCCTTAAAAATATAATAGAGAACTTTTATTCCTTTAATAGCA  250

seq1  AAGCACAAAAAAAACCTTAACTTCAGTACTAGGAACTGAGAGAAAATGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAAAAAAAACCTTAACTTCAGTACTAGGAACTGAGAGAAAATGTC  300

seq1  TAGAAATAATGGTATAGCAATATGCTGCAGACAGAAAAAAACAAAATCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATAATGGTATAGCAATATGCTGCAGACAGAAAAAAACAAAATCTT  350

seq1  GCCACCAACAATACAGAAATCTTCCTTCATCCTTTATTTGGATTGTCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCAACAATACAGAAATCTTCCTTCATCCTTTATTTGGATTGTCTGC  400

seq1  CCTTAAATGCTTCCACATAGTTGACTCACATTGATCATAAGGTCAAGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAATGCTTCCACATAGTTGACTCACATTGATCATAAGGTCAAGGCT  450

seq1  TAGAATTGAGAAAAATACAGATAACAAATAAGCAGTAGAAATGGAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTGAGAAAAATACAGATAACAAATAAGCAGTAGAAATGGAAATAA  500

seq1  ATTTACCATATAGCTTACCTAATCCATTTATAAGCAATAACCACAGCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCATATAGCTTACCTAATCCATTTATAAGCAATAACCACAGCCAG  550

seq1  GTCACTAAAGCATTCAAGTAGCTCCAAACAATTAGGTAGAGACATTTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTAAAGCATTCAAGTAGCTCCAAACAATTAGGTAGAGACATTTATA  600

seq1  GAAAGTATATGGAAATTATGAGGAAGCAGAGGTCCAGACATATGTGTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTATATGGAAATTATGAGGAAGCAGAGGTCCAGACATATGTGTACT  650

seq1  ATTTGGTTAATGAAAGTTTTAATTAAATGCAATTGGAAATAGAGGAAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTTAATGAAAGTTTTAATTAAATGCAATTGGAAATAGAGGAAAAG  700

seq1  GAAGACACTATTTGGAAACAAATTTGTATTTTCTTGTGCATAGAGAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACACTATTTGGAAACAAATTTGTATTTTCTTGTGCATAGAGAAATG  750

seq1  CATATAGCTATTTAATCATTTGCCTGGAAGAACTATGGTAGATAAATTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAGCTATTTAATCATTTGCCTGGAAGAACTATGGTAGATAAATTTG  800

seq1  GATAATTAATATGTTATTATTTCTCTCAAATTTTCATACATATAAACATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTAATATGTTATTATTTCTCTCAAATTTTCATACATATAAACATA  850

seq1  ACAACCCAATACTATAGTATAACTGAAAGTTTTCAGAAAAGTATGCTGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCCAATACTATAGTATAACTGAAAGTTTTCAGAAAAGTATGCTGCT  900

seq1  GCGACTATGTATATCTAGATATAGAATTAAGTTCATAAATGATTTAGATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACTATGTATATCTAGATATAGAATTAAGTTCATAAATGATTTAGATT  950

seq1  ATTTCATCATGATCTGGGTTCATATGATTTTCAAAAAGTCATAGATATTG  1000
      |||||||||||||||||||||||||||||||| |||||||||||||| ||
seq2  ATTTCATCATGATCTGGGTTCATATGATTTTC-AAAAGTCATAGATA-TG  998

seq1  ATTTATGATGAGAATGACTGATGACAGAGTTATACAAATTTTTAGGTAGA  1050
      |||||||||||| |||||||||||| |||||||||||  |||||||||||
seq2  ATTTATGATGAG-ATGACTGATGAC-GAGTTATACAA--TTTTAGGTAGA  1044

seq1  GTCTCAACTAAGACCTACCACAAC-AACACTTTGTTGTGATCTCTTGTTT  1099
      ||||| ||| |||||||||||||| |||||||   ||||||||| |  ||
seq2  GTCTC-ACT-AGACCTACCACAACAAACACTT--GTGTGATCTCCTTGTT  1090

seq1  CATTTCACATTTACTGATTCTT  1121
      ||||||||| ||||||||||||
seq2  CATTTCACA-TTACTGATTCTT  1111