BAC Information

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BAC

Clone NameB6Ng01-263M24
Chromosome18 (Build37)
Map Location 83,679,490 - 83,680,690
singlet/doubletsinglet
Overlap genenone
Upstream geneMbp, EG637748, Zfp236, LOC100039563, Zfp516, LOC100041001, 4921531P14Rik, LOC665284
Downstream geneTshz1, Zadh2, LOC669856, Zfp407
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263M24.bB6Ng01-263M24.g
ACCGA067883GA067884
length1,191247
definitionB6Ng01-263M24.b B6Ng01-263M24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgagtgccttatacttgcagatttgtagagttgtttcttcta
tctcttgaaaaatttcagccagcaaattattccacatttcatggatacat
ttttccctttgaaagccatatattttcccatattttttaaattttaattt
cctttttcttacagttcacatttagttacttttccattaacagtgtctaa
taggctgtcagtgcagccagcatgtcaccttttatcttacactgctgtct
tcatttctgaaagttagacgcatcacttttacctccttcatgtctccatt
tattaaaatgtttaattaaataatttattatttttgttttaaaattatgt
ttgtatatttgtgtgggtatagtcacatagtgaaggtacctggatcagct
ggagctgtacaggaagttgtagactgccatatacgggaagagaactctag
tcctccgtaagagcaataggagttcttagccaccaagtcaccactctagc
ttctttttttttattagatatgttctttatatacatttcaagtgctatcc
cgaaagttccctatactctccctccgccctgctcctctacccacccactc
cctcttcttggccctggcattaccctgtgctgggtcatataaagtttgca
ataccaaggggcctcttttcccagtgatggccgactaggccatcttctgc
tacatatgcagctagagacacgagctcggggggtactggttaattcatat
tgttgttccacctgtagggttgctgaccccttcagctccttgggtaattt
ccctagcttcttcattgggggccctgtgttccatcttatagatggctgtg
agtatccacttctgtatttgccaggcactggcatagcctcatatgagaca
gctataacagggttcccttcagcaaaatctttctggcatatgcaatagtg
tctgggttttggtggctgattatgggatggatccctgggtgggatagtgt
ctggatggtctatcttttcgtctagctcaaacttgtctctgtaactcctt
tcatggggtattttgtccctatttctagaagatggagtatccaccatggc
actctagccctcttatggttgttatgaatgctgttgtgcctggcaaggta
gctcatgcatcttaatgtccgcctgaggacacctttgggag

acagggctcccaatggaggagctagagaaagtacccaaggagctaaaggg
atctgcaaccctataggtggaacaacattatgaactaaccagtaccccgg
agctcttgactctagctgcatatgtatcaaaagatggcctagtcagccat
cactggaaagagaggcccattggacacgcaaactttatatgccccagtac
aggggaacgccagggccaaaaagggggagtgggtgggtaggggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_83679490_83680690
seq2: B6Ng01-263M24.b_47_1237

seq1  GAATTCTTTGAGTGCCTTATACTTGCAGATTTGTAGAGTTGTTTCTTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAGTGCCTTATACTTGCAGATTTGTAGAGTTGTTTCTTCTA  50

seq1  TCTCTTGAAAAATTTCAGCCAGCAAATTATTCCACATTTCATGGATACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGAAAAATTTCAGCCAGCAAATTATTCCACATTTCATGGATACAT  100

seq1  TTTTCCCTTTGAAAGCCATATATTTTCCCATATTTTTTAAATTTTAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTTTGAAAGCCATATATTTTCCCATATTTTTTAAATTTTAATTT  150

seq1  CCTTTTTCTTACAGTTCACATTTAGTTACTTTTCCATTAACAGTGTCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTCTTACAGTTCACATTTAGTTACTTTTCCATTAACAGTGTCTAA  200

seq1  TAGGCTGTCAGTGCAGCCAGCATGTCACCTTTTATCTTACACTGCTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTGTCAGTGCAGCCAGCATGTCACCTTTTATCTTACACTGCTGTCT  250

seq1  TCATTTCTGAAAGTTAGACGCATCACTTTTACCTCCTTCATGTCTCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTGAAAGTTAGACGCATCACTTTTACCTCCTTCATGTCTCCATT  300

seq1  TATTAAAATGTTTAATTAAATAATTTATTATTTTTGTTTTAAAATTATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAATGTTTAATTAAATAATTTATTATTTTTGTTTTAAAATTATGT  350

seq1  TTGTATATTTGTGTGGGTATAGTCACATAGTGAAGGTACCTGGATCAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATATTTGTGTGGGTATAGTCACATAGTGAAGGTACCTGGATCAGCT  400

seq1  GGAGCTGTACAGGAAGTTGTAGACTGCCATATACGGGAAGAGAACTCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGTACAGGAAGTTGTAGACTGCCATATACGGGAAGAGAACTCTAG  450

seq1  TCCTCCGTAAGAGCAATAGGAGTTCTTAGCCACCAAGTCACCACTCTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCGTAAGAGCAATAGGAGTTCTTAGCCACCAAGTCACCACTCTAGC  500

seq1  TTCTTTTTTTTTATTAGATATGTTCTTTATATACATTTCAAGTGCTATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTTATTAGATATGTTCTTTATATACATTTCAAGTGCTATCC  550

seq1  CGAAAGTTCCCTATACTCTCCCTCCGCCCTGCTCCTCTACCCACCCACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAGTTCCCTATACTCTCCCTCCGCCCTGCTCCTCTACCCACCCACTC  600

seq1  CCTCTTCTTGGCCCTGGCATTACCCTGTGCTGGGTCATATAAAGTTTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCTTGGCCCTGGCATTACCCTGTGCTGGGTCATATAAAGTTTGCA  650

seq1  ATACCAAGGGGCCTCTTTTCCCAGTGATGGCCGACTAGGCCATCTTCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAAGGGGCCTCTTTTCCCAGTGATGGCCGACTAGGCCATCTTCTGC  700

seq1  TACATATGCAGCTAGAGACACGAGCTCGGGGGGTACTGGTTAATTCATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATGCAGCTAGAGACACGAGCTCGGGGGGTACTGGTTAATTCATAT  750

seq1  TGTTGTTCCACCTGTAGGGTTGCTGACCCCTTCAGCTCCTTGGGTAATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTCCACCTGTAGGGTTGCTGACCCCTTCAGCTCCTTGGGTAATTT  800

seq1  CCCTAGCTTCTTCATTGGGGGCCCTGTGTTCCATCTTATAGATGGCTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGCTTCTTCATTGGGGGCCCTGTGTTCCATCTTATAGATGGCTGTG  850

seq1  AGTATCCACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATATGAGACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCCACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATATGAGACA  900

seq1  GCTATAACAGGG-TCCCTTCAGCAAAATCTTTCTGGCATATGCAATAGTG  949
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GCTATAACAGGGTTCCCTTCAGCAAAATCTTTCTGGCATATGCAATAGTG  950

seq1  TCTGGG-TTTGGTGGCTGATTATGGGATGGATCCCTGGGTGGGATAGTGT  998
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTTTTGGTGGCTGATTATGGGATGGATCCCTGGGTGGGATAGTGT  1000

seq1  CTGGATGGTCCATCTTTTCGTCTTAGCTCCAAACTTTGTCTCTGTAACTC  1048
      |||||||||| ||||||||||| ||||| ||||| |||||||||||||||
seq2  CTGGATGGTCTATCTTTTCGTC-TAGCT-CAAAC-TTGTCTCTGTAACTC  1047

seq1  CTTTCAT-GGGTATTTTGTTCCCTATTCTAAGGAGGAATGAAGTATCCAC  1097
      ||||||| |||||||||| ||||||||   || ||  ||| |||||||| 
seq2  CTTTCATGGGGTATTTTG-TCCCTATTTCTAGAAG--ATGGAGTATCCA-  1093

seq1  CCATTGCACTCTAG-CTTCTTATTGTTGTTATGAATGCTGTTGTTGCTGG  1146
      |||| ||||||||| | |||||| ||||||||||||||||||| |||  |
seq2  CCATGGCACTCTAGCCCTCTTATGGTTGTTATGAATGCTGTTG-TGCCTG  1142

seq1  GCAGGGTATGCGTTCCATGGCATCTATGTGGCGGTCGGAGGACACCTTTG  1196
      ||| |||| ||    ||| ||||||   || | | | |||||||||||||
seq2  GCAAGGTA-GC---TCAT-GCATCTTAATGTCCGCCTGAGGACACCTTTG  1187

seq1  TGGAG  1201
       ||||
seq2  -GGAG  1191


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