BAC Information

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BAC

Clone NameB6Ng01-265J24
Chromosome18 (Build37)
Map Location 28,054,920 - 28,056,058
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665977, EG665646
Downstream geneEG271505, EG625997, BC051408
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265J24.bB6Ng01-265J24.g
ACCGA069224GA069225
length1,1221,172
definitionB6Ng01-265J24.b B6Ng01-265J24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttgttactttctctgattccagcagccccatgttcacttcat
tctgaatttgccagtggttttaattactgtaatattctatttatctaatc
tctaatttttttatgagtaaattgcccagtattgaacctggggaaggatt
tgagtgagacaaaaaaaaaaaaaaaaaaggtgtggataaagacaaagcct
aatgaatttcaacaagaagctgacccaaaagtttctttgcagcatactcc
acaaacacaaaacacactcccaggcctagcctcacttatgagcaagtggg
actgtgggaactcccattcatcatcagtaagattaagtggagaaagcctt
ttgaatcatgctattcttaaacattaaaattacttgaacttcctcaactt
tctctgtctttcatccctctctctgtcactctgtaaccttaagtctcaca
tacacaaagatctaaataattctcctctctcctttcatgtggcattaggg
taaataacttgtgtggttcatgtctctataccacaattaaaatgaacttt
aatgtctgattcgaatcaacatctttctcagcaatagttatcaccagctg
acagaccctcttgatgagaacacctctagatcagtgttgcattttttttg
tcattgctgtttcaatgcagggtctcatttagctcagactggccttgaac
ttctatgagcctagagtgatcttgaactcttaaccctttgcttcttcttt
gtgaggtccaggattacagacctgtgccaccccaacctgaatatgagctg
ggatgaaaagcagagctttccatacaccaggcacacactggagcaactgc
acaatggctgctcagttcaatgagttcaatgttactgtttcctcttctac
tgctgaaaatactgctctcttctgcttggtgcatttccccaaccttcatg
tgctcattaactttgtatctcccccctcactgttgcaatcaccattgcaa
catagactatcatagctgatttaagtattgttatagtgtactgtattagc
agacatcatacaattctggagtggccaataaggagtattagatctgctgc
cataacgataaccttggaaaat
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaattcaggtgacagca
gatgctggtgaggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaggcttgtacaaccactctggaaatccgtctggcggttcctcag
aaaattggacatagtactaccagaggatccagcaatacctctcctgggca
tatatccagaagatgccccaactggtaagaaggacacatgctgcactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataagtggatattagcccaaaacct
aggatacccaagatataagatacaatttcctaaacacatgaaactcaaga
aaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaac
aaaacacccttggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatatagagactgccttatccagggatccaccccaaaatca
gcattgcatacactagcaagattttatcgaaagggacccagatgtatctg
tcttcttgtgagaactatgccggggctctggcaaacacagaaagtggatg
ccccacagtcagctaatgggatggatccacagggcttcctaatgggaggg
agctagaagaaaggttacccaaggagctaaagggatctgcaaccttatag
ggtgatcacattatgaactacccaggtacaccaggagcttcttgatctag
ctgcatattaatcaaaagaatgtgcctatgtcggcatcaactgggaaaga
aggagccaattggtacactcatacctttatattgtctccagaaatcaggg
aatcgctcagggtctcaaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_28054920_28056058
seq2: B6Ng01-265J24.b_49_1170

seq1  GAATTCTTTTGTTACTTTCTCTGATTCCAGCAGCCCCATGTTCACTTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGTTACTTTCTCTGATTCCAGCAGCCCCATGTTCACTTCAT  50

seq1  TCTGAATTTGCCAGTGGTTTTAATTACTGTAATATTCTATTTATCTAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTTGCCAGTGGTTTTAATTACTGTAATATTCTATTTATCTAATC  100

seq1  TCTAATTTTTTTATGAGTAAATTGCCCAGTATTGAACCTGGGGAAGGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTTTTTTATGAGTAAATTGCCCAGTATTGAACCTGGGGAAGGATT  150

seq1  TGAGTGAGACAAAAAAAAAAAAAAAAAAGGTGTGGATAAAGACAAAGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGAGACAAAAAAAAAAAAAAAAAAGGTGTGGATAAAGACAAAGCCT  200

seq1  AATGAATTTCAACAAGAAGCTGACCCAAAAGTTTCTTTGCAGCATACTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATTTCAACAAGAAGCTGACCCAAAAGTTTCTTTGCAGCATACTCC  250

seq1  ACAAACACAAAACACACTCCCAGGCCTAGCCTCACTTATGAGCAAGTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACAAAACACACTCCCAGGCCTAGCCTCACTTATGAGCAAGTGGG  300

seq1  ACTGTGGGAACTCCCATTCATCATCAGTAAGATTAAGTGGAGAAAGCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGGAACTCCCATTCATCATCAGTAAGATTAAGTGGAGAAAGCCTT  350

seq1  TTGAATCATGCTATTCTTAAACATTAAAATTACTTGAACTTCCTCAACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCATGCTATTCTTAAACATTAAAATTACTTGAACTTCCTCAACTT  400

seq1  TCTCTGTCTTTCATCCCTCTCTCTGTCACTCTGTAACCTTAAGTCTCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCTTTCATCCCTCTCTCTGTCACTCTGTAACCTTAAGTCTCACA  450

seq1  TACACAAAGATCTAAATAATTCTCCTCTCTCCTTTCATGTGGCATTAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAAGATCTAAATAATTCTCCTCTCTCCTTTCATGTGGCATTAGGG  500

seq1  TAAATAACTTGTGTGGTTCATGTCTCTATACCACAATTAAAATGAACTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAACTTGTGTGGTTCATGTCTCTATACCACAATTAAAATGAACTTT  550

seq1  AATGTCTGATTCGAATCAACATCTTTCTCAGCAATAGTTATCACCAGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTGATTCGAATCAACATCTTTCTCAGCAATAGTTATCACCAGCTG  600

seq1  ACAGACCCTCTTGATGAGAACACCTCTAGATCAGTGTTGCATTTTTTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACCCTCTTGATGAGAACACCTCTAGATCAGTGTTGCATTTTTTTTG  650

seq1  TCATTGCTGTTTCAATGCAGGGTCTCATTTAGCTCAGACTGGCCTTGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGCTGTTTCAATGCAGGGTCTCATTTAGCTCAGACTGGCCTTGAAC  700

seq1  TTCTATGAGCCTAGAGTGATCTTGAACTCTTAACCCTTTGCTTCTTCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGAGCCTAGAGTGATCTTGAACTCTTAACCCTTTGCTTCTTCTTT  750

seq1  GTGAGGTCCAGGATTACAGACCTGTGCCACCCCAACCTGAATATGAGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTCCAGGATTACAGACCTGTGCCACCCCAACCTGAATATGAGCTG  800

seq1  GGATGAAAAGCAGAGCTTTCCATACACCAGGCACACACTGGAGCAACTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAAAAGCAGAGCTTTCCATACACCAGGCACACACTGGAGCAACTGC  850

seq1  ACAATGGCTGCTCAGTTCAATGAGTTCAATGTTACTGTTTCCTCTTCTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGCTGCTCAGTTCAATGAGTTCAATGTTACTGTTTCCTCTTCTAC  900

seq1  TGCTGAAAATACTGCTCTCTTCTGCTTGGTGCATTTCCCCAACCCTTCAT  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGCTGAAAATACTGCTCTCTTCTGCTTGGTGCATTTCCCCAA-CCTTCAT  949

seq1  GTTGCTCATTAACTTTGTATTCTCCCCCTCACTGTTGCAATCACCATTGC  1000
      | ||||||||||||||||||   |||||||||||||||||||||||||||
seq2  G-TGCTCATTAACTTTGTATCTCCCCCCTCACTGTTGCAATCACCATTGC  998

seq1  AACAATAGACTAATCATAGCTTGGAATTTTAAAGTATTGTTATAGTGTAC  1050
      ||| ||||||| |||||||||  ||   || |||||||||||||||||| 
seq2  AAC-ATAGACT-ATCATAGCT--GA---TTTAAGTATTGTTATAGTGTA-  1040

seq1  CTGTATTAAGGCAAGGACATCATACAA-TCTGAAGTGG-CAATTAGGAGT  1098
      ||||||||  |||  |||||||||||| |||| ||||| |||| ||||||
seq2  CTGTATTA--GCA--GACATCATACAATTCTGGAGTGGCCAATAAGGAGT  1086

seq1  AATTAAGATCTGCTGCCAATAACAGATAAACCCTTGAAAAT  1139
      |  | |||||||||||| ||||| ||| |||| | ||||||
seq2  A--TTAGATCTGCTGCC-ATAAC-GAT-AACCTTGGAAAAT  1122