BAC Information

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BAC

Clone NameB6Ng01-267L21
Chromosome18 (Build37)
Map Location 10,501,088 - 10,502,216
singlet/doubletsinglet
Overlap geneAK220484
Upstream geneLOC665184, EG639618, LOC100039755, Cetn1, LOC225155, Colec12, LOC665111, LOC100039787, EG433161, Thoc1, Usp14, Rock1, LOC100039978, LOC635344, LOC435554, LOC621832
Downstream geneEsco1, Snrpd1, LOC100039880, Abhd3, Mib1, LOC665296, 1010001N08Rik, Gata6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267L21.bB6Ng01-267L21.g
ACCGA070784GA070785
length1,0931,123
definitionB6Ng01-267L21.b B6Ng01-267L21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtactaaagcaatctggtcctgggctttttttggttgggagat
tattaatgactgcttctatttctttaggggatatgggactgtttaggtca
ttaatctaatcctgatttaactttggtacctgttatctgtctagaaattt
gtccatttcatccaggttttccagttttgttgagtatagccttttgtagt
aggatctgatggtgttttggatttcctcaggttctattgttatgtctccc
ttttcatttctgattttgttaattaggatactgtccctgtgccctctagt
gagtctggctaagggttaatctagcttgttgattttcttaaagaaccagc
tcctggtttggttgattctttgtatagttcttgtttccacgtagttgatt
tcacccgagtttgattatttcctgcagtctactcctcttgtgtgaatttg
cttccttttgttctagagcttttaggtatgttgtcaagctgctagtgtgt
gctctctctagtttctttttggaggcactcagagctatgagttttcctct
tggaaatgctttcattatgtcccataagtttgggtatgttgtggcttcat
tttcattaaactctaaaaagttttttaatttctttctttattccttcctt
gaccaaggtatcattgagtagagtgttgttcagtttccacgtgaatgttg
gctttgtattatttatgttgttattgaagatcagccttagtccatggtga
tctcataggatgcatggtgatctcatagggataatttgaatattttttgt
gtctgttttggcctgttttgtgaccaattagatggtcgattttgcagaaa
ggtaccatgaggtgctgagaagaaggcatatcccttttgttttaggataa
aatgttctgtagatatttgttaatccatttgttttataatttctgttagt
ttcactgtctctgtttagtttctgtttccaggatctctccattgatgaga
gtgggggtgtgaagcctccacctctatgtgtggaggcgcaataggtgctt
cttactgagtttctttaaagagaagtgtagcccctgtcacttt
gaattccatgtctagaattctttgtttccagtccctgctctgtgggcttc
tttacactctcatgagtatatttgtctctttattgactgtatcagttttc
tttggctagcccatttatgctgtattaagcacatgatttaaagttgagaa
taaggcatttgccctcaagaatctctctctatctcgtgggctagtctgac
cctttattagagtcagtaaacaactatcactacacactctggtaacaccg
tgacacattggaatatgagagctggcaaaggttcacagccaagagctttt
aggagtcttggaagagagggcttaaacttcaaactgtgtgcagaagcctg
ctcaaagtggacctgttgaggaagggtgacggtccagtcaaaggaagcca
aacctcaaagaaaagaactaagctaagccaactgacagacctcccttctg
aaagccaggaacaggaatcctctggggcataggtctgaagcagggcacca
cctctgtgagagcgtgtgtctgtggagtctgaccctccctggctgctgac
tacagtgaaatgatgcttgattagggtctaaattctaagattccaggtct
tatattctaaactgagttgagttccttttatacccatatctgaaggcctt
gacaggcaggcctagaccagaagactgcctgttttcgtcccgtgataagg
caggtaggttttattaacacgaatcactctttgctcttgtggttggcctg
attctgttgtcttgggtgtttttccttcagaccctgttcttttaagacaa
acaaacaaacaaacaaacaaaacaacacaaaacaaaacaaaactttttta
tgtatgagtacattgtagctgtcttcaaacacaccagcagaagcatccga
tcccattctacatggtaataagcttccgtgtggtttgctgggaattgaac
ctcagggcctctagagagcaggtaatgctcatatactgctgagccatctc
tcagcccagcctgttcgttatctgtcaccctgtctgctgaggtattgggg
gatccagtaggttaattccatgtgactgatgagttcttagcattcacaaa
cataattctagcctagccttaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_10501088_10502216
seq2: B6Ng01-267L21.g_68_1190

seq1  GAATTCCATGTCTAGAATTCTTTGTTTCCAGTCCCTGCTCTGTGGGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTCTAGAATTCTTTGTTTCCAGTCCCTGCTCTGTGGGCTTC  50

seq1  TTTACACTCTCATGAGTATATTTGTCTCTTTATTGACTGTATCAGTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACTCTCATGAGTATATTTGTCTCTTTATTGACTGTATCAGTTTTC  100

seq1  TTTGGCTAGCCCATTTATGCTGTATTAAGCACATGATTTAAAGTTGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTAGCCCATTTATGCTGTATTAAGCACATGATTTAAAGTTGAGAA  150

seq1  TAAGGCATTTGCCCTCAAGAATCTCTCTCTATCTCGTGGGCTAGTCTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCATTTGCCCTCAAGAATCTCTCTCTATCTCGTGGGCTAGTCTGAC  200

seq1  CCTTTATTAGAGTCAGTAAACAACTATCACTACACACTCTGGTAACACCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTAGAGTCAGTAAACAACTATCACTACACACTCTGGTAACACCG  250

seq1  TGACACATTGGAATATGAGAGCTGGCAAAGGTTCACAGCCAAGAGCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACATTGGAATATGAGAGCTGGCAAAGGTTCACAGCCAAGAGCTTTT  300

seq1  AGGAGTCTTGGAAGAGAGGGCTTAAACTTCAAACTGTGTGCAGAAGCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTCTTGGAAGAGAGGGCTTAAACTTCAAACTGTGTGCAGAAGCCTG  350

seq1  CTCAAAGTGGACCTGTTGAGGAAGGGTGACGGTCCAGTCAAAGGAAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGTGGACCTGTTGAGGAAGGGTGACGGTCCAGTCAAAGGAAGCCA  400

seq1  AACCTCAAAGAAAAGAACTAAGCTAAGCCAACTGACAGACCTCCCTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCAAAGAAAAGAACTAAGCTAAGCCAACTGACAGACCTCCCTTCTG  450

seq1  AAAGCCAGGAACAGGAATCCTCTGGGGCATAGGTCTGAAGCAGGGCACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAGGAACAGGAATCCTCTGGGGCATAGGTCTGAAGCAGGGCACCA  500

seq1  CCTCTGTGAGAGCGTGTGTCTGTGGAGTCTGACCCTCCCTGGCTGCTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTGAGAGCGTGTGTCTGTGGAGTCTGACCCTCCCTGGCTGCTGAC  550

seq1  TACAGTGAAATGATGCTTGATTAGGGTCTAAATTCTAAGATTCCAGGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGAAATGATGCTTGATTAGGGTCTAAATTCTAAGATTCCAGGTCT  600

seq1  TATATTCTAAACTGAGTTGAGTTCCTTTTATACCCATATCTGAAGGCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCTAAACTGAGTTGAGTTCCTTTTATACCCATATCTGAAGGCCTT  650

seq1  GACAGGCAGGCCTAGACCAGAAGACTGCCTGTTTTCGTCCCGTGATAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCAGGCCTAGACCAGAAGACTGCCTGTTTTCGTCCCGTGATAAGG  700

seq1  CAGGTAGGTTTTATTAACACGAATCACTCTTTGCTCTTGTGGTTGGCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAGGTTTTATTAACACGAATCACTCTTTGCTCTTGTGGTTGGCCTG  750

seq1  ATTCTGTTGTCTTGGGTGTTTTTCCTTCAGACCCTGTTCTTTTAAGACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTTGTCTTGGGTGTTTTTCCTTCAGACCCTGTTCTTTTAAGACAA  800

seq1  ACAAACAAACAAACAAACAAAACAACACAAAACAAAACAAAAC-TTTTTA  849
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACAAACAAACAAACAAACAAAACAACACAAAACAAAACAAAACTTTTTTA  850

seq1  TGTATGAGTACATTGTAGCTGTCTTCAAACACACCAGCAGAAGGCATCCG  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGTATGAGTACATTGTAGCTGTCTTCAAACACACCAGCAGAA-GCATCCG  899

seq1  ATCCCATTCTACATGGTTATAAGCTTCCGTGTGG-TTGCTGGGAATTGAA  948
      ||||||||||||||||| |||||||||||||||| |||||||||||||||
seq2  ATCCCATTCTACATGGTAATAAGCTTCCGTGTGGTTTGCTGGGAATTGAA  949

seq1  -CTCAGGGCCTCTAGAAGAGCAGGTAATGCTCATA-ACTGCTGAGCCATC  996
       |||||||||||||| ||||||||||||||||||| ||||||||||||||
seq2  CCTCAGGGCCTCTAG-AGAGCAGGTAATGCTCATATACTGCTGAGCCATC  998

seq1  TCTCCAGCCCCAGGCCCTGTTCGTTATCTGTCACCCTGTCTGCTGAGGTA  1046
      ||| ||| |||||  |||||||||||||||||||||||||||||||||||
seq2  TCT-CAG-CCCAG--CCTGTTCGTTATCTGTCACCCTGTCTGCTGAGGTA  1044

seq1  TTGGGGGGAATCCCAGTAGTTTAAATTCCATGTGACTGAGTAGGTTCTTA  1096
      |||||||  || ||||||| || |||||||||||||||| |  |||||||
seq2  TTGGGGG--AT-CCAGTAGGTT-AATTCCATGTGACTGA-TGAGTTCTTA  1089

seq1  GCATCCACAAACATAA-TCTAGCTAAGCCTTAAA  1129
      |||| ||||||||||| ||||||  |||||||||
seq2  GCATTCACAAACATAATTCTAGCCTAGCCTTAAA  1123