BAC Information

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BAC

Clone NameB6Ng01-269G11
Chromosome12 (Build37)18 (Build37)
Map Location 71,203,267 - 71,203,3796,520,400 - 6,520,748
singlet/doubletsingletsinglet
Overlap geneNin
Upstream geneLOC665967, LOC665973, Rps29, Ppil5, Rpl36al, Mgat2, 1110034A24Rik, 9330151L19Rik, Pole2, Klhdc1, Klhdc2, Sdccag1, Arf6, LOC100040856, LOC100040862, Gm71, Sos2, LOC100040879, L2hgdh, Atp5s, Cdkl1, Map4k5, Spg3a, EG622339, Sav1, LOC100040999
Downstream geneENSMUSG00000056391, Gm804, Pygl, Trim9, Txndc1, LOC100040965, LOC100041061, Frmd6, Actr10, Psma3, 3110056K07Rik, Arid4a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269G11.bB6Ng01-269G11.g
ACCGA072013GA072014
length815369
definitionB6Ng01-269G11.b B6Ng01-269G11.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(71,203,267 - 71,203,379)(6,520,400 - 6,520,748)
sequence
gaattcatagtatctaagagactaacaattttaagcaattgtaagctatg
atacttactattaatatacaaattaaagcttgattattcaacattttaaa
acactgtctacagcacacaatttaatttctgtgctgaagcaggaggaaac
tcaaaagaataaacatgtgatctaatcacatatgcttttctctcatagaa
gggctgtttttaaatacaataaatgggatgcatgcatgcatgaatttata
gaaaatacaaaaacatgcataaaagcaacttttaacaacttatatttagg
ataatgattatcaattttatctaagatgatgttatgcaataggccaagta
tcaatattctgcaataaccaacttaattgctgtttggaataaggaacaga
tgcttcttcaggtttttaagacacaatttttgttatagtttttctaaaat
acatgaaattatcttacaattcttaattagcaccacagcagccttataat
aggatgttaaaactttacttggagatgaagaaagatgattttaacattaa
tgttttcttttgtcaaagaattgctgtgagcacatttaatagccatagct
aaaataagcagctaatatttaattaccattgattataattgataacaatt
ataaaagctttctttggggcaatggtggcacatgcctttaatcccagcat
ttgggaggtagagacaggtggatttcttagttcgaggacagcctggtcta
caaagtgagttccaggacatccagggcaatacagagaaaccctgtcttgt
tggggggtggggggg
gaattcatcaccaatatcaaaaaaactgaaaacgataagaccagtgtgga
atgtgctacgatgttaagcttttttttagaataattgtgtaaacagtaaa
tgaaataagataaaaagcatagaaaaagagagaagacaaatgttaaacag
acaaaggagaaaggaggtatgggcagagaagaatgctgtagaggagagaa
gagagcgagagcctggaggagcaaagaggttttacaaagtttagaataac
acataaaaacatgcaaaatgttgtaagccaatacagtcaagtcaaaatac
tactaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtc
cacggctggcctcactggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_71203267_71203379
seq2: B6Ng01-269G11.b_726_838

seq1  CCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCG  50
      ||||||||||||||| | |||||| |||| |||| |||||||| ||||||
seq2  CCTTTAATCCCAGCATTTGGGAGGTAGAGACAGGTGGATTTCTTAGTTCG  50

seq1  AGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAG  100
      ||| ||||||||||||||||||||||||||||||| ||||||| | ||||
seq2  AGGACAGCCTGGTCTACAAAGTGAGTTCCAGGACATCCAGGGCAATACAG  100

seq1  AGAAACCCTGTCT  113
      |||||||||||||
seq2  AGAAACCCTGTCT  113

seq1: chr18_6520400_6520748
seq2: B6Ng01-269G11.g_62_410 (reverse)

seq1  ACACACACACACACACACACACACACACACACACACACACACTTTAGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACACTTTAGTAG  50

seq1  TATTTTGACTTGACTGTATTGGCTTACAACATTTTGCATGTTTTTATGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGACTTGACTGTATTGGCTTACAACATTTTGCATGTTTTTATGTG  100

seq1  TTATTCTAAACTTTGTAAAACCTCTTTGCTCCTCCAGGCTCTCGCTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTAAACTTTGTAAAACCTCTTTGCTCCTCCAGGCTCTCGCTCTCT  150

seq1  TCTCTCCTCTACAGCATTCTTCTCTGCCCATACCTCCTTTCTCCTTTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTCTACAGCATTCTTCTCTGCCCATACCTCCTTTCTCCTTTGTC  200

seq1  TGTTTAACATTTGTCTTCTCTCTTTTTCTATGCTTTTTATCTTATTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAACATTTGTCTTCTCTCTTTTTCTATGCTTTTTATCTTATTTCAT  250

seq1  TTACTGTTTACACAATTATTCTAAAAAAAAGCTTAACATCGTAGCACATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTTTACACAATTATTCTAAAAAAAAGCTTAACATCGTAGCACATT  300

seq1  CCACACTGGTCTTATCGTTTTCAGTTTTTTTGATATTGGTGATGAATTC  349
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTGGTCTTATCGTTTTCAGTTTTTTTGATATTGGTGATGAATTC  349