BAC Information

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BAC

Clone NameB6Ng01-269K05
Chromosome18 (Build37)
Map Location 87,182,766 - 87,183,509
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545270, LOC665402, Neto1, Cbln2, LOC100039872, LOC100039881, LOC665437, LOC435580, LOC546719
Downstream geneLOC383318, Ppia-ps18_1039.1, LOC329008
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269K05.bB6Ng01-269K05.g
ACCGA072179GA072180
length1,141949
definitionB6Ng01-269K05.b B6Ng01-269K05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctcccaa
tggaggagctagagaaagtacccaagagctaaagggatcttcaccctata
gtgacacattatgactacagtaccctgagctctgactctagctgcatatg
tatcaaagatgctagtcgtcatcactgtaaagagagtcaatgaacccgcg
actttgtgtgccctgttacaggacgccaggtcaagggggaa

gaattccttcactaaagagtgtctataagagtctcctgagtatatgcagc
tctatagctcattattttatttttgtggccaacaacaaatataatgggca
ttccaaaatctgtgcatccactgatttaatttcatcaattgtaagtaaaa
ctacagtacctacaagcccttatagaaatttactttaaaatcactgatga
aaatattgtgcaacgctaagatggctaaaagttttctgtatggcatgaaa
ctcccaacctgacttccacaatttcaacacaagttcacatcttccaaaat
aatgaatggaagattctatgactatgtacccataaatgactggcagtgcc
aattctcctgcctcagctattgcaatggatgcatcatagcatctcaatca
tgctcttattatgacttttacctaatcatgaataatgttaagcatcttcc
tatgggcttatctagaataagtatgtatgtcttctctggcaaaaaaaaaa
aaaaaataattaattaattaaaataaatctctttggaactggaacctaat
tttaaatttaattttttacttttaaagttgagttctaagaatctcttgcc
tacctttgattaaacagtttcatctggatgtttatgtggcttttactctt
aaactctactttatccttttattctcagggacattcaaagagctgagttt
taatcagatttccaaattatacttctctctttaaagctaaatgattttcc
tatggagtacaacacattttctagcccaaggtgacataggtatttttgta
ttttatcctaaaattattgtaattttagaatacacattatactcagatat
acacagctttggagatatattttgaaagaaatgtgatacctgtgtccaat
attattaatttatgtatctatctatctgcctgtagcatatgatcatgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_87182766_87183509
seq2: B6Ng01-269K05.g_63_806 (reverse)

seq1  TCATTTAGCTTTAAAGAGAGAAGTATAATTTGGAAATCTGATTAAAACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAGCTTTAAAGAGAGAAGTATAATTTGGAAATCTGATTAAAACTC  50

seq1  AGCTCTTTGAATGTCCCTGAGAATAAAAGGATAAAGTAGAGTTTAAGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTTGAATGTCCCTGAGAATAAAAGGATAAAGTAGAGTTTAAGAGT  100

seq1  AAAAGCCACATAAACATCCAGATGAAACTGTTTAATCAAAGGTAGGCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCACATAAACATCCAGATGAAACTGTTTAATCAAAGGTAGGCAAG  150

seq1  AGATTCTTAGAACTCAACTTTAAAAGTAAAAAATTAAATTTAAAATTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTTAGAACTCAACTTTAAAAGTAAAAAATTAAATTTAAAATTAGG  200

seq1  TTCCAGTTCCAAAGAGATTTATTTTAATTAATTAATTATTTTTTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTTCCAAAGAGATTTATTTTAATTAATTAATTATTTTTTTTTTTT  250

seq1  TTTTGCCAGAGAAGACATACATACTTATTCTAGATAAGCCCATAGGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCAGAGAAGACATACATACTTATTCTAGATAAGCCCATAGGAAGA  300

seq1  TGCTTAACATTATTCATGATTAGGTAAAAGTCATAATAAGAGCATGATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAACATTATTCATGATTAGGTAAAAGTCATAATAAGAGCATGATTG  350

seq1  AGATGCTATGATGCATCCATTGCAATAGCTGAGGCAGGAGAATTGGCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTATGATGCATCCATTGCAATAGCTGAGGCAGGAGAATTGGCACT  400

seq1  GCCAGTCATTTATGGGTACATAGTCATAGAATCTTCCATTCATTATTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCATTTATGGGTACATAGTCATAGAATCTTCCATTCATTATTTTG  450

seq1  GAAGATGTGAACTTGTGTTGAAATTGTGGAAGTCAGGTTGGGAGTTTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGTGAACTTGTGTTGAAATTGTGGAAGTCAGGTTGGGAGTTTCAT  500

seq1  GCCATACAGAAAACTTTTAGCCATCTTAGCGTTGCACAATATTTTCATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATACAGAAAACTTTTAGCCATCTTAGCGTTGCACAATATTTTCATCA  550

seq1  GTGATTTTAAAGTAAATTTCTATAAGGGCTTGTAGGTACTGTAGTTTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTTAAAGTAAATTTCTATAAGGGCTTGTAGGTACTGTAGTTTTAC  600

seq1  TTACAATTGATGAAATTAAATCAGTGGATGCACAGATTTTGGAATGCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATTGATGAAATTAAATCAGTGGATGCACAGATTTTGGAATGCCCA  650

seq1  TTATATTTGTTGTTGGCCACAAAAATAAAATAATGAGCTATAGAGCTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTGTTGTTGGCCACAAAAATAAAATAATGAGCTATAGAGCTGCA  700

seq1  TATACTCAGGAGACTCTTATAGACACTCTTTAGTGAAGGAATTC  744
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTCAGGAGACTCTTATAGACACTCTTTAGTGAAGGAATTC  744


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