BAC Information

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BAC

Clone NameB6Ng01-292L06
Chromosome18 (Build37)
Map Location 63,601,712 - 63,602,846
singlet/doubletsinglet
Overlap genenone
Upstream geneHtr4, Fbxo38, Spink10, EG408198, 2700046A07Rik, Apcdd1, Napg, 9430028L06Rik, 9030411M15Rik
Downstream geneLOC627792, Txnl1, Wdr7, LOC629436, LOC667773, St8sia3, LOC433193, Onecut2, LOC667783
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292L06.bB6Ng01-292L06.g
ACCGA089272GA089273
length9861,170
definitionB6Ng01-292L06.b B6Ng01-292L06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gttttgtcgtggaatacttttgtttctccatctacggtaattgaaagttt
ggctgcgtatagtagcctgggctggcatttgtgttctcttagtgtctgta
taacatctgtccaggatcttctggctttcatagtatctggtgaaaaatct
ggtgtaattctgataggcctgcctttatatgttacttgacctttttccct
tactgcttttaatattctatctttatttagtgcatttgttgttctgatta
ttatgtgtcaggaagaatttattttctggtccagtctatttagagttctg
taggcttcttgtatgttcatgtgcatctcttttttcaggtttgggaagtt
ttcttctataattttgctgaagatatttgctggccctttaagttgaaaat
cttcattctcatctactcctattatccatgggtttggtcttctcattgtg
tcctggatttcctggatgttttgagttagggtctttttgcattttgtgtt
ttctttgattgttgtgctgatgttctctatgaaatcttctgcacctgagg
ttctctcttccatctcttgtattctgttgctgatgctcgcatctatggtt
cagatttttttcctagggtttctatctccagtgttgcctcactttggctt
ttctttattgtgtctacttccttttttgggtctagtatggttttgttcat
ttccatcacctgtttcgttgtgttttcctgtttttctttaaggacttgta
attctttagcagtgttctcctgtattatttaagtgagttattaacgtcct
tcttgatatcttctaccatcatcatgagatatgctttttaaatctgggtt
ctagctttttgggtgtgttggggtgcccaggacctggtctgatgtgggga
gtgcttgtgttcagatgaaggtgagtattctgggtttctgttagtaatga
attcttacgactgccctttcgccatcctggaaatct
gaattcaaactaggaaaaaaaaatcaagaaagagaacagtagtggggact
taataatgtttcctaaattttgactctttggtatgtatgccctgagacag
gatgtgtaaatatggtaatatttattctactgtatactacaggtataatt
gggatctgaatcatcagatggtaaggtactcaagaggagcataaagctga
gtgggccaggcctaatcagggaagctttaaacagcagtaaggaactgaag
agatgtcagggagtttgattcctggtaagcacattgtaaagccgggtgtc
ggggcatttccgtgtagttcccacactggggaggtggagattatcctctg
gggcttgctggacatccaacctatcctgacaagtttcagggcaacatgag
accctctctctaatagcaaggtgggcagtgtttgagaaacagtgcccaag
gttatcccttggctggcacacaagaagcatgaaaaaacgggcaaaggtat
tttagagaaatatttttccagttctttacaaagtacaaagaactttcgaa
gaacaactttgaagtgacttgttatgtggcaatagagaagtgataaaact
aaacactggagcaacaacaacaaaaaagtaataatgaataaccaaaatcc
taaagctgaggcaaggaaaagaaaaaataatcattatcaataatcaatta
cagcactttcacaaataaaagagaagacatgaactccaaatgtataatat
tagagaggtgacatctctgcaggttctacagatagaaagatcaggaccat
gctactgagagaagggtaaacaaacgtgaaggaagtatgtgcccgggtac
attttggagaaataggcaaaaaggccaaatttcattctaaaggttcaatc
gttcccattaacacacttcaactaagaaaatggatggcattgagaaatca
accctgtctgtctgtctgtctgactgcccatctatcaattgatcacctcc
aacccaaaaattttgaatttcaaaaaaagtcacacacagttgaaatatac
agttaccaatgtattccgtttgccaatcctgcccacctcattaaaatttc
cagtgttgccgattctataggaaatagccataaaacgtttctttttgccc
attttttattaggcatttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_63601712_63602846
seq2: B6Ng01-292L06.g_67_1236

seq1  GAATTCAAACTAGGAAAAAAAAATCAAGAAAGAGAACAGTAGTGGGGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACTAGGAAAAAAAAATCAAGAAAGAGAACAGTAGTGGGGACT  50

seq1  TAATAATGTTTCCTAAATTTTGACTCTTTGGTATGTATGCCCTGAGACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATGTTTCCTAAATTTTGACTCTTTGGTATGTATGCCCTGAGACAG  100

seq1  GATGTGTAAATATGGTAATATTTATTCTACTGTATACTACAGGTATAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGTAAATATGGTAATATTTATTCTACTGTATACTACAGGTATAATT  150

seq1  GGGATCTGAATCATCAGATGGTAAGGTACTCAAGAGGAGCATAAAGCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCTGAATCATCAGATGGTAAGGTACTCAAGAGGAGCATAAAGCTGA  200

seq1  GTGGGCCAGGCCTAATCAGGGAAGCTTTAAACAGCAGTAAGGAACTGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCCAGGCCTAATCAGGGAAGCTTTAAACAGCAGTAAGGAACTGAAG  250

seq1  AGATGTCAGGGAGTTTGATTCCTGGTAAGCACATTGTAAAGCCGGGTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCAGGGAGTTTGATTCCTGGTAAGCACATTGTAAAGCCGGGTGTC  300

seq1  GGGGCATTTCCGTGTAGTTCCCACACTGGGGAGGTGGAGATTATCCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCATTTCCGTGTAGTTCCCACACTGGGGAGGTGGAGATTATCCTCTG  350

seq1  GGGCTTGCTGGACATCCAACCTATCCTGACAAGTTTCAGGGCAACATGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGCTGGACATCCAACCTATCCTGACAAGTTTCAGGGCAACATGAG  400

seq1  ACCCTCTCTCTAATAGCAAGGTGGGCAGTGTTTGAGAAACAGTGCCCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTCTCTAATAGCAAGGTGGGCAGTGTTTGAGAAACAGTGCCCAAG  450

seq1  GTTATCCCTTGGCTGGCACACAAGAAGCATGAAAAAACGGGCAAAGGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCCCTTGGCTGGCACACAAGAAGCATGAAAAAACGGGCAAAGGTAT  500

seq1  TTTAGAGAAATATTTTTCCAGTTCTTTACAAAGTACAAAGAACTTTCGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGAAATATTTTTCCAGTTCTTTACAAAGTACAAAGAACTTTCGAA  550

seq1  GAACAACTTTGAAGTGACTTGTTATGTGGCAATAGAGAAGTGATAAAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACTTTGAAGTGACTTGTTATGTGGCAATAGAGAAGTGATAAAACT  600

seq1  AAACACTGGAGCAACAACAACAAAAAAGTAATAATGAATAACCAAAATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTGGAGCAACAACAACAAAAAAGTAATAATGAATAACCAAAATCC  650

seq1  TAAAGCTGAGGCAAGGAAAAGAAAAAATAATCATTATCAATAATCAATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTGAGGCAAGGAAAAGAAAAAATAATCATTATCAATAATCAATTA  700

seq1  CAGCAC-TTCACAAATAAAAGAGAAGACATGAACTCCAAATGTATAATAT  749
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTTTCACAAATAAAAGAGAAGACATGAACTCCAAATGTATAATAT  750

seq1  TAGAGAGGTGACATCTCTGCAGGTTCTACAGATAGAAAGATCAGGACCAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGGTGACATCTCTGCAGGTTCTACAGATAGAAAGATCAGGACCAT  800

seq1  GCTACTGAGAGAAGGGTAAACAAACGTGAA-GAAGTATGTGCC--GGTAC  846
      |||||||||||||||||||||||||||||| ||||||||||||  |||||
seq2  GCTACTGAGAGAAGGGTAAACAAACGTGAAGGAAGTATGTGCCCGGGTAC  850

seq1  A-TTTGGAGAAATAGGCAAAAAGGCCAAA-TTCATTCTAAA-GTTCAATC  893
      | ||||||||||||||||||||||||||| ||||||||||| ||||||||
seq2  ATTTTGGAGAAATAGGCAAAAAGGCCAAATTTCATTCTAAAGGTTCAATC  900

seq1  G-TCCCA-TAACACAC-TCAAC-AAG-AAATGGATGGCA-TGAG-AATCA  936
      | ||||| |||||||| ||||| ||| |||||||||||| |||| |||||
seq2  GTTCCCATTAACACACTTCAACTAAGAAAATGGATGGCATTGAGAAATCA  950

seq1  A-CCTGTCTGTCTGTCTGTCTGACTG-CCATCTATC-ATTGATCA-CTCC  982
      | |||||||||||||||||||||||| ||||||||| |||||||| ||||
seq2  ACCCTGTCTGTCTGTCTGTCTGACTGCCCATCTATCAATTGATCACCTCC  1000

seq1  A--CCAAAAA-TTTGAATT--CAAAAAAGTCACACA---GTGAAATATAC  1024
      |  ||||||| ||||||||   ||||||||||||||    ||||||||||
seq2  AACCCAAAAATTTTGAATTTCAAAAAAAGTCACACACAGTTGAAATATAC  1050

seq1  AG-TAACAATGTATT-CGTTTGCAAATCCTGCC--ACTCATTAAAATTT-  1069
      || || ||||||||| ||||||| |||||||||   ||||||||||||| 
seq2  AGTTACCAATGTATTCCGTTTGCCAATCCTGCCCACCTCATTAAAATTTC  1100

seq1  CAGTGATG-CGATTCTATAGG-AATAGCATAAAAACTTTTTTTTTT--CC  1115
      ||||| || |||||||||||| ||||||   ||||| ||| |||||  ||
seq2  CAGTGTTGCCGATTCTATAGGAAATAGCCATAAAACGTTTCTTTTTGCCC  1150

seq1  ATTTTTTATTAGGTATTTAG  1135
      ||||||||||||| ||||||
seq2  ATTTTTTATTAGGCATTTAG  1170