BAC Information

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BAC

Clone NameB6Ng01-293G10
Chromosome18 (Build37)
Map Location 14,022,556 - 14,158,126
singlet/doubletdoublet
Overlap geneZfp521, LOC100040094
Upstream geneOsbpl1a, LOC435556, Impact, Hrh4, EG383354, LOC665379, LOC100040358
Downstream geneLOC100040103, LOC100040391, LOC382096, LOC100040129, EG623867, Ss18, LOC100040446, Psma8, Taf4b, LOC669965, Kctd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293G10.bB6Ng01-293G10.g
ACCGA089792GA089793
length1,0301,138
definitionB6Ng01-293G10.b B6Ng01-293G10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,022,556 - 14,023,587)(14,156,993 - 14,158,126)
sequence
gaattcttttgtatcattggagtaggtcctgatgaatgggcactagcctt
gttcagcttggaagacctcaccatcatgagactgtgggcttacttgcttt
ggcgtcatgagagactggacttacttgcccttctttcagtttttccctct
gccaccatgaatattgtacattcagattcctagtgtttaaaacagattag
tgataagaatcagtcaactcttctgtagaaacactggctccaaaatgccc
aagtgcgcagtgctgtagatgaaagaacagatgggacatccgctcctgtt
cttttcagcaggattctcaccatggcccaaggaggcacaaagaaatgatc
ctgtctatatcaagtctcttagacacctccatggaaccactccatggttt
tcacctaagcagggcagaagccttgctttcacctccccagagaagcgcca
aatgctcagctatgaacatgtgtgcttatacacgcattccctctcagaat
atccaactcctaaagaccaaaactgctttagaatcctattttcctacttt
gacaccagactggcgcaataggaagcccatatgttgcctctcctcagcta
ccctaatgagcagaggctatggtgctcacaaaactgacacaggacatatt
ctagatcagcagagaaggtccatcctcagggtctctgcacctacagtggg
ctggagacaatacatgctcactgtcttaaggaaagctcagagtcatgtgc
ctctttaacaggttacccactttgttctgacccattaccagccagaggca
tttaatgtacagagaaaaagggcctcctctcccagagaagtagtaaacgt
ggccttcctcactgcgcagatagctgcaccactgctctatgttcatccct
gtagcactgctgtggaccactgtgaagtgtacaaactgcagagctgtgtt
ctacagccatttcccatgaccccatagaaaggaaaagagaagaaagggag
ggagggagggaagacgacagagggaataga
gaattcatcactcctttgctaatatgatcagtgcccttgtgatccaactg
gcctcccataccctcaacaagctggggactgtgcctttaacagtggacat
ttagagaagacattttgtgtgcagatgacaacaatgatgagatcacggtt
tgttattcagttgtttatttttcttttttttctcatcgctgtaacaaaat
atttgacaaaagtaactttaaaaagctttagtttggcttacagtttgaaa
gtacagaccatcctggcatacaaaaatgcatgtgtgtatgtggagccact
tacagttagaggagtcttcctacctcagttaacacagaaagagctccctc
ttagcatgcccacaggtgtgtctccagttgattctagatcctgtcgagtt
aacagtcattactaaccttcaggttgacagataatgtgcctcacctgaac
aaagttaggctgtgtggtgatgagaagccatgggcatgttacaggtgtca
gctcactcagaactaaagaaagtctgtgtgctctagcatgttcctactag
atagcagcaactaaacacacacacacacacacacacacacaaatactttc
tgtgcttaacaaagagagcgtaagagagctaagggaacggcagaaaaaaa
atgtcttttgccccaaataaaaatttctgagtcaatagagttgggaaaaa
aattccatgcatagatgacttgagttttaaaagctacacagtgtgtctgt
caaggttttgataattttaagttgttttgatggaactatgtgaatatact
cttcaaggtaataattaattccctagggagaacactcattaaaaaaatca
tgttaccaaagaggaaagaaaatactgaaaagctaggaaatcaccccata
atctcactgacagtgaaacctttcagaaggctataaagaaaaatgaaagc
ttgtagtgtaggtagctgagtaacaattgaagctcagataagagccggat
agcatatttcaactgtgtcacaatcgcactgaaatgggtcccaaggagta
tctcacaagatgctatggcacaaagaaatgcatgatgtcgccacgttgca
aagggtgccacaggagtcagctgaattactacatgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_14022556_14023587
seq2: B6Ng01-293G10.b_47_1076

seq1  GAATTCTTTTGTATCATTGGAGTAGGTCCTGATGAATGGGCACTAGCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGTATCATTGGAGTAGGTCCTGATGAATGGGCACTAGCCTT  50

seq1  GTTCAGCTTGGAAGACCTCACCATCATGAGACTGTGGGCTTACTTGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGCTTGGAAGACCTCACCATCATGAGACTGTGGGCTTACTTGCTTT  100

seq1  GGCGTCATGAGAGACTGGACTTACTTGCCCTTCTTTCAGTTTTTCCCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTCATGAGAGACTGGACTTACTTGCCCTTCTTTCAGTTTTTCCCTCT  150

seq1  GCCACCATGAATATTGTACATTCAGATTCCTAGTGTTTAAAACAGATTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCATGAATATTGTACATTCAGATTCCTAGTGTTTAAAACAGATTAG  200

seq1  TGATAAGAATCAGTCAACTCTTCTGTAGAAACACTGGCTCCAAAATGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGAATCAGTCAACTCTTCTGTAGAAACACTGGCTCCAAAATGCCC  250

seq1  AAGTGCGCAGTGCTGTAGATGAAAGAACAGATGGGACATCCGCTCCTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCGCAGTGCTGTAGATGAAAGAACAGATGGGACATCCGCTCCTGTT  300

seq1  CTTTTCAGCAGGATTCTCACCATGGCCCAAGGAGGCACAAAGAAATGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAGCAGGATTCTCACCATGGCCCAAGGAGGCACAAAGAAATGATC  350

seq1  CTGTCTATATCAAGTCTCTTAGACACCTCCATGGAACCACTCCATGGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTATATCAAGTCTCTTAGACACCTCCATGGAACCACTCCATGGTTT  400

seq1  TCACCTAAGCAGGGCAGAAGCCTTGCTTTCACCTCCCCAGAGAAGCGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTAAGCAGGGCAGAAGCCTTGCTTTCACCTCCCCAGAGAAGCGCCA  450

seq1  AATGCTCAGCTATGAACATGTGTGCTTATACACGCATTCCCTCTCAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCAGCTATGAACATGTGTGCTTATACACGCATTCCCTCTCAGAAT  500

seq1  ATCCAACTCCTAAAGACCAAAACTGCTTTAGAATCCTATTTTCCTACTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAACTCCTAAAGACCAAAACTGCTTTAGAATCCTATTTTCCTACTTT  550

seq1  GACACCAGACTGGCGCAATAGGAAGCCCATATGTTGCCTCTCCTCAGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCAGACTGGCGCAATAGGAAGCCCATATGTTGCCTCTCCTCAGCTA  600

seq1  CCCTAATGAGCAGAGGCTATGGTGCTCACAAAACTGACACAGGACATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAATGAGCAGAGGCTATGGTGCTCACAAAACTGACACAGGACATATT  650

seq1  CTAGATCAGCAGAGAAGGTCCATCCTCAGGGTCTCTGCACCTACAGTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATCAGCAGAGAAGGTCCATCCTCAGGGTCTCTGCACCTACAGTGGG  700

seq1  CTGGAGACAATACATGCTCACTGTCTTAAGGAAAGCTCAGAGTCATGTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGACAATACATGCTCACTGTCTTAAGGAAAGCTCAGAGTCATGTGC  750

seq1  CTCTTTAACAGGTTACCCACTTTGTTCTGACCCATTACCAGCCAGAGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTAACAGGTTACCCACTTTGTTCTGACCCATTACCAGCCAGAGGCA  800

seq1  TTTAATGTACAGAGAAAAAGGGCCTCCTCTCCCAGAGAAGTAGTAAACGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTACAGAGAAAAAGGGCCTCCTCTCCCAGAGAAGTAGTAAACGT  850

seq1  GGCCTTCCTCACTGCGCAGATAGCTGCACCACTGCTCTATGTTCATCCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCCTCACTGCGCAGATAGCTGCACCACTGCTCTATGTTCATCCCT  900

seq1  GTAGCACTGCTGTGGACCACTGTGAAGTGTACAAACTGCAGAGCTGTGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCACTGCTGTGGACCACTGTGAAGTGTACAAACTGCAGAGCTGTGTT  950

seq1  CTACAGCCATTTCCCATGACCCCATAGAAAGGAAAAGAGGAAGAAAGGGA  1000
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTACAGCCATTTCCCATGACCCCATAGAAAGGAAAAGA-GAAGAAAGGGA  999

seq1  GGGAGGGAGGGAAGGACGGACAGAGGG-ATAGA  1032
      ||||||||||||| ||| ||||||||| |||||
seq2  GGGAGGGAGGGAA-GAC-GACAGAGGGAATAGA  1030

seq1: chr18_14156993_14158126
seq2: B6Ng01-293G10.g_68_1205 (reverse)

seq1  AGGCATGTGTGTAA-TCTGCTGTACTCCTGT-GCACC--TTTCCACGTGG  46
      ||||||||  |||| || |||| |||||||| |||||  || | ||||||
seq2  AGGCATGT-AGTAATTCAGCTG-ACTCCTGTGGCACCCTTTGCAACGTGG  48

seq1  CGACACCAAGCATT--CTTGTGCCATAGGCATCTTGTGAGATACTCC-TG  93
      ||||| || |||||   |||||||||| ||||||||||||||||||| ||
seq2  CGACATCATGCATTTCTTTGTGCCATA-GCATCTTGTGAGATACTCCTTG  97

seq1  GGA-CCATTTCAGTGGGA-TGTGACACAGTTGAAATATTGCTATCCGGCT  141
      ||| ||||||||||| || |||||||||||||||||| ||||||||||||
seq2  GGACCCATTTCAGTGCGATTGTGACACAGTTGAAATA-TGCTATCCGGCT  146

seq1  CTTATCTGAAGCTTCAATTGTTACTCAGCTACCTACACTACAAGCCTTCA  191
      |||||||| |||||||||||||||||||||||||||||||||||| ||||
seq2  CTTATCTG-AGCTTCAATTGTTACTCAGCTACCTACACTACAAGCTTTCA  195

seq1  TTTTTCTTTATAGCCTTCTGAAAGGTTTCACTGTCAGTGAGATTATGGGG  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTATAGCCTTCTGAAAGGTTTCACTGTCAGTGAGATTATGGGG  245

seq1  TGATTTCCTAGCTTTTCAGTATTTTCTTTCCTCTTTGGTAACATGATTTT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCCTAGCTTTTCAGTATTTTCTTTCCTCTTTGGTAACATGATTTT  295

seq1  TTTAATGAGTGTTCTCCCTAGGGAATTAATTATTACCTTGAAGAGTATAT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGAGTGTTCTCCCTAGGGAATTAATTATTACCTTGAAGAGTATAT  345

seq1  TCACATAGTTCCATCAAAACAACTTAAAATTATCAAAACCTTGACAGACA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATAGTTCCATCAAAACAACTTAAAATTATCAAAACCTTGACAGACA  395

seq1  CACTGTGTAGCTTTTAAAACTCAAGTCATCTATGCATGGAATTTTTTTCC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGTAGCTTTTAAAACTCAAGTCATCTATGCATGGAATTTTTTTCC  445

seq1  CAACTCTATTGACTCAGAAATTTTTATTTGGGGCAAAAGACATTTTTTTT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTATTGACTCAGAAATTTTTATTTGGGGCAAAAGACATTTTTTTT  495

seq1  CTGCCGTTCCCTTAGCTCTCTTACGCTCTCTTTGTTAAGCACAGAAAGTA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCGTTCCCTTAGCTCTCTTACGCTCTCTTTGTTAAGCACAGAAAGTA  545

seq1  TTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAGTTGCTGCTATCTAGTAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAGTTGCTGCTATCTAGTAG  595

seq1  GAACATGCTAGAGCACACAGACTTTCTTTAGTTCTGAGTGAGCTGACACC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGCTAGAGCACACAGACTTTCTTTAGTTCTGAGTGAGCTGACACC  645

seq1  TGTAACATGCCCATGGCTTCTCATCACCACACAGCCTAACTTTGTTCAGG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACATGCCCATGGCTTCTCATCACCACACAGCCTAACTTTGTTCAGG  695

seq1  TGAGGCACATTATCTGTCAACCTGAAGGTTAGTAATGACTGTTAACTCGA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCACATTATCTGTCAACCTGAAGGTTAGTAATGACTGTTAACTCGA  745

seq1  CAGGATCTAGAATCAACTGGAGACACACCTGTGGGCATGCTAAGAGGGAG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCTAGAATCAACTGGAGACACACCTGTGGGCATGCTAAGAGGGAG  795

seq1  CTCTTTCTGTGTTAACTGAGGTAGGAAGACTCCTCTAACTGTAAGTGGCT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTGTGTTAACTGAGGTAGGAAGACTCCTCTAACTGTAAGTGGCT  845

seq1  CCACATACACACATGCATTTTTGTATGCCAGGATGGTCTGTACTTTCAAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATACACACATGCATTTTTGTATGCCAGGATGGTCTGTACTTTCAAA  895

seq1  CTGTAAGCCAAACTAAAGCTTTTTAAAGTTACTTTTGTCAAATATTTTGT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGCCAAACTAAAGCTTTTTAAAGTTACTTTTGTCAAATATTTTGT  945

seq1  TACAGCGATGAGAAAAAAAAGAAAAATAAACAACTGAATAACAAACCGTG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCGATGAGAAAAAAAAGAAAAATAAACAACTGAATAACAAACCGTG  995

seq1  ATCTCATCATTGTTGTCATCTGCACACAAAATGTCTTCTCTAAATGTCCA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATCATTGTTGTCATCTGCACACAAAATGTCTTCTCTAAATGTCCA  1045

seq1  CTGTTAAAGGCACAGTCCCCAGCTTGTTGAGGGTATGGGAGGCCAGTTGG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAAAGGCACAGTCCCCAGCTTGTTGAGGGTATGGGAGGCCAGTTGG  1095

seq1  ATCACAAGGGCACTGATCATATTAGCAAAGGAGTGATGAATTC  1134
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAAGGGCACTGATCATATTAGCAAAGGAGTGATGAATTC  1138