BAC Information

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BAC

Clone NameB6Ng01-294P03
Chromosome18 (Build37)
Map Location 22,382,920 - 22,478,225
singlet/doubletdoublet
Overlap geneLOC546708
Upstream geneGm944, LOC665722, LOC225264, Klhl14, 4921528I01Rik
Downstream geneLOC100040547, Asxl3, Nol4, LOC100040579, LOC665797
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294P03.bB6Ng01-294P03.g
ACCGA090941GA090942
length1,1491,104
definitionB6Ng01-294P03.b B6Ng01-294P03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,382,920 - 22,384,063)(22,477,110 - 22,478,225)
sequence
gaattcaaaggctttctgccacagcatcctgtgtaactgagatatccaca
tttcaggcccttagccttggtgaggcattccttgacagtgatacattttt
gcatatgcagcacaaccctattttagcctcatagtttttaaatgcacttc
ctagtttcaatctgtaaacatttttacagaattttatatatctttatcta
gaaatgaaatcagtccattgctccattagtgtcaagaaattcagaattat
ttaacttcatcaaataaactgagaattttccattttttatgtatgctctt
accatggtgaaataatatagtgactgttgaaataaatatagatgagaatt
tattgtgtggtatgggtgacatttatcattggaaaaataaatgttgttga
ataaataatgttgcaataaatgggcagtcatgagagaaaagtcacttcac
agctaatgtttttccagtaaaggaaagatttaaatgtataataaagaaga
ctataaacatcttagtaataggtatagaaggaaaatggcatttttttcta
tctctttatctgaggataaaaaatggacatcagggaacaacaatgcaaag
agtaatcttaaaattaaaattggaagctgggcatggtggtgggaggcaga
agcaggtgggtttctgagttcgaggccagcctggtctacaaagtgagttc
caggacagccagggctatacagagaaaccctgtctcaaaaataaataaat
aaataaataaataaataaataaataaataaataaaattggaaaatttgat
tctgtaaaaagatgcttgtacaagaaaaatccaccctgaggctgtattta
tgggttagagacaattcctcagtaggcatgctcagttttagatgtgtgta
tcatagcagaatacaaggaataaaataccccacctcttttttttttcttg
ctgtgccaataggcatacttctaagataggtcttctataatatctttatt
cagaatgttatagttccatagagccttctccttttaaatgtagccaaaac
ttagttatttagacccttaacaaaaatatgttgattgggttgcaaagaca
cagataacctctcttgctatacctttcagatgatggctgtggatgatgc

gaattccttcttggtcacagccttctcagcaacagcctgctcctccttct
caatctcctctgggtctctgtagaagtaaagatcaggcacaacctcccat
gcctgctcacagtctcccgtacttcgcatgcagagtacttccggggccag
catccaccacatcagacccactgagtgagctcccttgtttcataggatgg
caatgtccatatagcgcagaggagaatctgtgttacacagagcaatggtg
ggtaggttgacatgagaggcctctgtgagtggctggtggtcagccctggg
atcagtcaccactagaagccgtggctccctgaaagctgcctggatctggt
tagtgaaggtcccaggtgcgaagcagccagcaattggagtggctcctgtg
gcagcagcaaacttcaactcagctcactgcccagtgttcctggaggtgat
gatgtgtgtcagaagggttctcgatggcaacaatagcttgagctgtgagc
aacagcttcccccaggtcctcttcagatttatgatgtcacttttcctttt
gtactgctccatctgaaagtcagagttggtgccacctaagtgggttcctg
cagcaaggaatttgaggaaaaattcctcctcatcagcaggacatcaagga
ctccacacattgcatacgtttcccttttagatgggacccaagaacaatgc
cctatggacccgcccctgggtagcgctgaaagactaatgccctttctatg
tgaggtaaattatgtctctccaagaaatcatacaacaaactagttttaag
tttgtggaaacaagtcccccccacccccacccccgttttctattcatgtt
gacaaggaatttcaggcatgattagcatcataaaggctttgaccagggtc
aaaggctactgtacatcttatttattaatcccaaagagttaaaatggtgt
gtccaaacacactgcgtgtgctctctgacaccgcataagcatccatacag
cggcaagtttatcttttagtaatgtaaaactcacactactattcccataa
aataattatatcttagtcttttattacctattgaatacaaatatttctct
tgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_22382920_22384063
seq2: B6Ng01-294P03.b_44_1192

seq1  GAATTCAAAGGCTTTCTGCCACAGCATCCTGTGTAACTGAGATATCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGGCTTTCTGCCACAGCATCCTGTGTAACTGAGATATCCACA  50

seq1  TTTCAGGCCCTTAGCCTTGGTGAGGCATTCCTTGACAGTGATACATTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGCCCTTAGCCTTGGTGAGGCATTCCTTGACAGTGATACATTTTT  100

seq1  GCATATGCAGCACAACCCTATTTTAGCCTCATAGTTTTTAAATGCACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGCAGCACAACCCTATTTTAGCCTCATAGTTTTTAAATGCACTTC  150

seq1  CTAGTTTCAATCTGTAAACATTTTTACAGAATTTTATATATCTTTATCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTCAATCTGTAAACATTTTTACAGAATTTTATATATCTTTATCTA  200

seq1  GAAATGAAATCAGTCCATTGCTCCATTAGTGTCAAGAAATTCAGAATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAAATCAGTCCATTGCTCCATTAGTGTCAAGAAATTCAGAATTAT  250

seq1  TTAACTTCATCAAATAAACTGAGAATTTTCCATTTTTTATGTATGCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTCATCAAATAAACTGAGAATTTTCCATTTTTTATGTATGCTCTT  300

seq1  ACCATGGTGAAATAATATAGTGACTGTTGAAATAAATATAGATGAGAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGTGAAATAATATAGTGACTGTTGAAATAAATATAGATGAGAATT  350

seq1  TATTGTGTGGTATGGGTGACATTTATCATTGGAAAAATAAATGTTGTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGTGGTATGGGTGACATTTATCATTGGAAAAATAAATGTTGTTGA  400

seq1  ATAAATAATGTTGCAATAAATGGGCAGTCATGAGAGAAAAGTCACTTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAATGTTGCAATAAATGGGCAGTCATGAGAGAAAAGTCACTTCAC  450

seq1  AGCTAATGTTTTTCCAGTAAAGGAAAGATTTAAATGTATAATAAAGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATGTTTTTCCAGTAAAGGAAAGATTTAAATGTATAATAAAGAAGA  500

seq1  CTATAAACATCTTAGTAATAGGTATAGAAGGAAAATGGCATTTTTTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAACATCTTAGTAATAGGTATAGAAGGAAAATGGCATTTTTTTCTA  550

seq1  TCTCTTTATCTGAGGATAAAAAATGGACATCAGGGAACAACAATGCAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTATCTGAGGATAAAAAATGGACATCAGGGAACAACAATGCAAAG  600

seq1  AGTAATCTTAAAATTAAAATTGGAAGCTGGGCATGGTGGTGGGAGGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATCTTAAAATTAAAATTGGAAGCTGGGCATGGTGGTGGGAGGCAGA  650

seq1  AGCAGGTGGGTTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTGGGTTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTC  700

seq1  CAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCAAAAATAAATAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCAAAAATAAATAAAT  750

seq1  AAATAAATAAATAAATAAATAAATAAATAAATAAAATTGGAAAATTTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAAATAAATAAATAAATAAATAAATAAAATTGGAAAATTTGAT  800

seq1  TCTGTAAAAAGATGCTTGTACAAGAAAAATCCACCCTGAGGCTGTATTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAAAAGATGCTTGTACAAGAAAAATCCACCCTGAGGCTGTATTTA  850

seq1  TGGGTTAGAGACAATTCCTCAGTAGGCATGCTCAGTTTTAGATGTGTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTAGAGACAATTCCTCAGTAGGCATGCTCAGTTTTAGATGTGTGTA  900

seq1  TCATAGCAGGAATACAAGGAATAAAATACCCCAACCTC-TTTTTTTTTCT  949
      |||||||| ||||||||||||||||||||||| ||||| |||||||||||
seq2  TCATAGCA-GAATACAAGGAATAAAATACCCC-ACCTCTTTTTTTTTTCT  948

seq1  TGCTGTTGCCAATAGGCATACTTCTAAGATAGGTC-TCTATAATATCTTT  998
      ||||| ||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGCTG-TGCCAATAGGCATACTTCTAAGATAGGTCTTCTATAATATCTTT  997

seq1  ATTCAGAATGTTATAG-TCCATAGAGCCTTCTCCTTTAAAATGTAGGCCA  1047
      |||||||||||||||| |||||||||||||||||||| |||||||| | |
seq2  ATTCAGAATGTTATAGTTCCATAGAGCCTTCTCCTTTTAAATGTAGCCAA  1047

seq1  AACCTAGTAATTTAGAACCTTA--CAAAATATG-TGATTGGGTTGCAAAG  1094
      ||| |||| ||||||| |||||   |||||||| ||||||||||||||||
seq2  AACTTAGTTATTTAGACCCTTAACAAAAATATGTTGATTGGGTTGCAAAG  1097

seq1  ACCACAGATAA-CTCTC-TGCTA-CCCTTTCAGATGATGCTTGTTGATGA  1141
      | ||||||||| ||||| |||||  ||||||||||||||  ||| |||||
seq2  A-CACAGATAACCTCTCTTGCTATACCTTTCAGATGATGGCTGTGGATGA  1146

seq1  TGC  1144
      |||
seq2  TGC  1149


seq1: chr18_22477110_22478225
seq2: B6Ng01-294P03.g_63_1166 (reverse)

seq1  GACAAGAGAAATATTTGGTATCATTAGTAAATAAAAAAGAACTAAAGATT  50
      |||||||||||||||||   ||| |||  |||||||    ||| ||||| 
seq2  GACAAGAGAAATATTTGTATTCAATAGGTAATAAAA---GACT-AAGAT-  45

seq1  AATAATTA-TTTATGGGATTAGTAAGTTGTG-GAGTTTTACATTTACTAA  98
       ||||||| ||||||||| |||||    ||| |||||||||| |||||||
seq2  -ATAATTATTTTATGGGAATAGTA----GTGTGAGTTTTACA-TTACTAA  89

seq1  AAGATAAACTTGCCGCTGTATGGATGCTTTATGCGGTGTCAAGAGAGCAC  148
      ||||||||||||||||||||||||||| |||||||||||| |||||||||
seq2  AAGATAAACTTGCCGCTGTATGGATGC-TTATGCGGTGTC-AGAGAGCAC  137

seq1  ACGCAGTGTGTTTGGACACACCATTTTAACTCTTTGGGATTAATAAATAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAGTGTGTTTGGACACACCATTTTAACTCTTTGGGATTAATAAATAA  187

seq1  GATGTACAGTAGCCTTTGACCCTGGTCAAAGCCTTTATGATGCTAATCAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTACAGTAGCCTTTGACCCTGGTCAAAGCCTTTATGATGCTAATCAT  237

seq1  GCCCTGAAATTCCTTGTCAACATGAATAGAAAACGGGGGTGGGGGTGGGG  298
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-CCTGAAATTCCTTGTCAACATGAATAGAAAACGGGGGTGGGGGTGGGG  286

seq1  GGGACTTGTTTCCACAAACTTAAAACTAGTTTGTTGTATGATTTCTTGGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTTGTTTCCACAAACTTAAAACTAGTTTGTTGTATGATTTCTTGGA  336

seq1  GAGACATAATTTACCTCACATAGAAAGGGCATTAGTCTTTCAGCGCTACC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATAATTTACCTCACATAGAAAGGGCATTAGTCTTTCAGCGCTACC  386

seq1  CAGGGGCGGGTCCATAGGGCATTGTTCTTGGGTCCCATCTAAAAGGGAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGCGGGTCCATAGGGCATTGTTCTTGGGTCCCATCTAAAAGGGAAA  436

seq1  CGTATGCAATGTGTGGAGTCCTTGATGTCCTGCTGATGAGGAGGAATTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATGCAATGTGTGGAGTCCTTGATGTCCTGCTGATGAGGAGGAATTTT  486

seq1  TCCTCAAATTCCTTGCTGCAGGAACCCACTTAGGTGGCACCAACTCTGAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAAATTCCTTGCTGCAGGAACCCACTTAGGTGGCACCAACTCTGAC  536

seq1  TTTCAGATGGAGCAGTACAAAAGGAAAAGTGACATCATAAATCTGAAGAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGATGGAGCAGTACAAAAGGAAAAGTGACATCATAAATCTGAAGAG  586

seq1  GACCTGGGGGAAGCTGTTGCTCACAGCTCAAGCTATTGTTGCCATCGAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGGGGAAGCTGTTGCTCACAGCTCAAGCTATTGTTGCCATCGAGA  636

seq1  ACCCTTCTGACACACATCATCACCTCCAGGAACACTGGGCAGTGAGCTGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCTGACACACATCATCACCTCCAGGAACACTGGGCAGTGAGCTGA  686

seq1  GTTGAAGTTTGCTGCTGCCACAGGAGCCACTCCAATTGCTGGCTGCTTCG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAGTTTGCTGCTGCCACAGGAGCCACTCCAATTGCTGGCTGCTTCG  736

seq1  CACCTGGGACCTTCACTAACCAGATCCAGGCAGCTTTCAGGGAGCCACGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGGACCTTCACTAACCAGATCCAGGCAGCTTTCAGGGAGCCACGG  786

seq1  CTTCTAGTGGTGACTGATCCCAGGGCTGACCACCAGCCACTCACAGAGGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGTGGTGACTGATCCCAGGGCTGACCACCAGCCACTCACAGAGGC  836

seq1  CTCTCATGTCAACCTACCCACCATTGCTCTGTGTAACACAGATTCTCCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATGTCAACCTACCCACCATTGCTCTGTGTAACACAGATTCTCCTC  886

seq1  TGCGCTATATGGACATTGCCATCCTATGAAACAAGGGAGCTCACTCAGTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCTATATGGACATTGCCATCCTATGAAACAAGGGAGCTCACTCAGTG  936

seq1  GGTCTGATGTGGTGGATGCTGGCCCCGGAAGTACTCTGCATGCGAAGTAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGATGTGGTGGATGCTGGCCCCGGAAGTACTCTGCATGCGAAGTAC  986

seq1  GGGAGACTGTGAGCAGGCATGGGAGGTTGTGCCTGATCTTTACTTCTACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACTGTGAGCAGGCATGGGAGGTTGTGCCTGATCTTTACTTCTACA  1036

seq1  GAGACCCAGAGGAGATTGAGAAGGAGGAGCAGGCTGTTGCTGAGAAGGCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCCAGAGGAGATTGAGAAGGAGGAGCAGGCTGTTGCTGAGAAGGCT  1086

seq1  GTGACCAAGAAGGAATTC  1116
      ||||||||||||||||||
seq2  GTGACCAAGAAGGAATTC  1104


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