BAC Information

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BAC

Clone NameB6Ng01-301B21
Chromosome18 (Build37)
Map Location 19,260,431 - 19,261,484
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040658
Downstream geneLOC665624, LOC665629, Dsc3, Dsc2, Dsc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301B21.bB6Ng01-301B21.g
ACCGA095513GA095514
length1,0351,058
definitionB6Ng01-301B21.b B6Ng01-301B21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagccctcaccctctgtgtaatgagtcacaggaaccttactaggg
tcaaacttggcatcaaatgccttactccagagcccttatagcagccctct
tttgaataaaacagtttataagacattcatttataaagcttggtttgcaa
tcaattatgttagaaatcagcattacaaatatgcctgcatactctttaga
tgattaaaggtaatgaattttaacattcttacagtgctactgataatgtt
agctttattttctgtatgttccaatgtcacagagtcaaaaaaaaaaaaaa
ccaaaaaaaccaaccataatttcagtgattcctgtgcttaattatactgg
gaaaagatgtttcactcaactcaggtaccatgagaagaaaaatataaacc
aacatataccaaccattaaatattagatgcatattttaataaaatataac
tgacaagagaggaacagacagctcaaggctaagagggtttactgtgcaat
catgtggacctgagatcaaatcccaaactcaagtgaaaggtcaggcatac
tatgaatgcttgtaagtctagttttgaggagtctcactcctattctggcc
tctgtacttagcggcatacacaagtgcacacacactgtcacactaacaaa
ctaaatattggacatagttaacataatattttcattataagaaatcaatt
gaagacccagaaatgaacccacaaacctatggtcacatgatctttgacaa
aggagttaaagccatccagtggaaaaatgacagcattttcaacaaatggt
gctgactcaactggcagttagcatgtagaagaatgcaaattgatccatta
ttttcttcttgtacaaagctcaagtccaagtgaatcacgacctccaccta
aaatcagagctactgaaacttatagagagaaagtgtggaaaagcttagca
catgaccacagggaaattttcatgacaaacacatactatgctctagatca
gatgacaataggactcataaatgcaagcattctga
gaattctcctagacctgcaaaaagagggcagggagatcttcaaaaggttt
ccattttgatatggaatacctcaccatgttggtaatttctgcaagataaa
tactcccttatataccatttgagtctggggtatccaataattcacagatc
ctaacaaatggcatttttaaatgttcatatcacatgcgttctattgtaat
ctttagttatatttttaatctgaattgtaagatcataggttcctatgtgg
cttttcatgcattgtagttaattgttttcaccttctcagataactttttt
tttttttttaattttttttttttcgagacagagtttctctgtataaccct
ggctgtcctggaaatcactttgtagaccaggatggcctcgaactcagaaa
tccacctgcctctgcctcctgagtgctgggattaaaggcgtgagccacca
cgaccggcatcagataactcttatccgtagatttgtgttggtttcatcct
ttatcagagaaacttattgcaattctttgtgggtaatacagggctttgga
gcttgtaaaatgtgcagagaaaaagcagctatgattgttcagccacatag
ggaacctaggtatcaatattatgtcacccaaatttcaggtaatgaagagc
caaagaattggaaggaccactgtgaaatgcactcttaaggacctggaaag
aaggttgcacacatgaaatgacagaagctgtagttacctgcatgtaacct
aaataaagccaagcaccaacaaagggagatggggtagggatgggttctgt
ggctcttaccaactgcttaagacttcattagccattgttggctattgagc
acagagctactttttctttgggcagtggtccctggaaggtttatttatgc
ttcggacatgatcccacattcccaccacatatagggcaacactacttagg
gtattactataaccaaacaaattaaaggaacatcaatattgcaaataagg
tctggaaatttgagccaaagtcaatttaaattgagaaaaatatataccat
ggatcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_19260431_19261484
seq2: B6Ng01-301B21.b_44_1078

seq1  GAATTCAGCCCTCACCCTCTGTGTAATGAGTCACAGGAACCTTACTAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCCTCACCCTCTGTGTAATGAGTCACAGGAACCTTACTAGGG  50

seq1  TCAAACTTGGCATCAAATGCCTTACTCCAGAGCCCTTATAGCAGCCCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTTGGCATCAAATGCCTTACTCCAGAGCCCTTATAGCAGCCCTCT  100

seq1  TTTGAATAAAACAGTTTATAAGACATTCATTTATAAAGCTTGGTTTGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATAAAACAGTTTATAAGACATTCATTTATAAAGCTTGGTTTGCAA  150

seq1  TCAATTATGTTAGAAATCAGCATTACAAATATGCCTGCATACTCTTTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTATGTTAGAAATCAGCATTACAAATATGCCTGCATACTCTTTAGA  200

seq1  TGATTAAAGGTAATGAATTTTAACATTCTTACAGTGCTACTGATAATGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAAGGTAATGAATTTTAACATTCTTACAGTGCTACTGATAATGTT  250

seq1  AGCTTTATTTTCTGTATGTTCCAATGTCACAGAGTCAAAAAAAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTATTTTCTGTATGTTCCAATGTCACAGAGTCAAAAAAAAAAAAAA  300

seq1  CCAAAAAAACCAACCATAATTTCAGTGATTCCTGTGCTTAATTATACTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAAACCAACCATAATTTCAGTGATTCCTGTGCTTAATTATACTGG  350

seq1  GAAAAGATGTTTCACTCAACTCAGGTACCATGAGAAGAAAAATATAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGATGTTTCACTCAACTCAGGTACCATGAGAAGAAAAATATAAACC  400

seq1  AACATATACCAACCATTAAATATTAGATGCATATTTTAATAAAATATAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATACCAACCATTAAATATTAGATGCATATTTTAATAAAATATAAC  450

seq1  TGACAAGAGAGGAACAGACAGCTCAAGGCTAAGAGGGTTTACTGTGCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGAGAGGAACAGACAGCTCAAGGCTAAGAGGGTTTACTGTGCAAT  500

seq1  CATGTGGACCTGAGATCAAATCCCAAACTCAAGTGAAAGGTCAGGCATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGACCTGAGATCAAATCCCAAACTCAAGTGAAAGGTCAGGCATAC  550

seq1  TATGAATGCTTGTAAGTCTAGTTTTGAGGAGTCTCACTCCTATTCTGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATGCTTGTAAGTCTAGTTTTGAGGAGTCTCACTCCTATTCTGGCC  600

seq1  TCTGTACTTAGCGGCATACACAAGTGCACACACACTGTCACACTAACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTACTTAGCGGCATACACAAGTGCACACACACTGTCACACTAACAAA  650

seq1  CTAAATATTGGACATAGTTAACATAATATTTTCATTATAAGAAATCAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATATTGGACATAGTTAACATAATATTTTCATTATAAGAAATCAATT  700

seq1  GAAGACCCAGAAATGAACCCACAAACCTATGGTCACATGATCTTTGACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCCAGAAATGAACCCACAAACCTATGGTCACATGATCTTTGACAA  750

seq1  AGGAGTTAAAGCCATCCAGTGGAAAAATGACAGCATTTTCAACAAATGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTAAAGCCATCCAGTGGAAAAATGACAGCATTTTCAACAAATGGT  800

seq1  GCTGACTCAACTGGCAGTTAGCATGTAGAAGAATGCAAATTGATCCATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTCAACTGGCAGTTAGCATGTAGAAGAATGCAAATTGATCCATTA  850

seq1  TTTTCTTCTTGTACAAAGCTCAAGTCCAAGTGAATCAACGACCTCCACCT  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTTCTTCTTGTACAAAGCTCAAGTCCAAGTGAATC-ACGACCTCCACCT  899

seq1  AAAATCAGAGCTACTGAAACTTATAGAAGAGAAAGTGTGGAAAAGCCTTA  950
      |||||||||||||||||||||||||| |||||||||||||||||||  | 
seq2  AAAATCAGAGCTACTGAAACTTATAG-AGAGAAAGTGTGGAAAAGC--TT  946

seq1  AGCACATGAACACAGGGGAAATTTTCATGAACAAAACACCAATACCTTAT  1000
      ||||||||| |||| |||||||||||||||   ||||||  ||||  |||
seq2  AGCACATGACCACA-GGGAAATTTTCATGA--CAAACAC--ATAC--TAT  989

seq1  GCTCTAAGATCAAGAATTGACAAATAGGAACTCATAAAATTGCAAAGCA-  1049
      ||||| ||||| |||  |||| |||||| |||||||||  ||| ||||| 
seq2  GCTCT-AGATC-AGA--TGAC-AATAGG-ACTCATAAA--TGC-AAGCAT  1030

seq1  TCTGA  1054
      |||||
seq2  TCTGA  1035