BAC Information

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BAC

Clone NameB6Ng01-302I13
Chromosome18 (Build37)
Map Location 4,147,075 - 4,148,165
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664794, Crem, EG621440, Cul2, EG621501, Bambi, LOC100039273, LOC435549, EG664867, LOC621666
Downstream geneLyzl1, LOC383374, LOC664909, Map3k8, Papd1, EG664931, LOC100039354, LOC433157, 9430020K01Rik, LOC268988, Svil
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302I13.bB6Ng01-302I13.g
ACCGA096557GA096558
length8821,105
definitionB6Ng01-302I13.b B6Ng01-302I13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtttttacgttgttatactttcagtatatgtctagaaaattgt
ccatttcatccagattttccagttttgttgagtataggcttttgtagtat
gacctgatgatttttttttgaatttcctcagtttctgttgttatatctct
ttttttttccatttctgattttattaatttggatactgtctctaggccct
ctagttagtctggctaagggtttatctatcttgtcgagttttttcaaaga
accagctcctggtttggttgattcttcgtatagttctttttgtttttatt
ggttgatttcagccctgagtttgattatttcctaccatctactcctcttt
tttttttttttttttttttttttttgagatttcaggggtgctgttaagct
gctagtgtttctttttggcggcactcaaagctatgagttttcctcttagg
cctgctttcattgtgtcccataagcttgggtatgttgtggtttcattttt
attaaattctaaaaattcgttaatttctttctttatttcttccttgacca
tgttattgttgagtaatgtgttgttcagcttccatttgtatgtgggcttt
ttattgtttttgttgctatagaagaccagccttaatctgtagtgatctga
taggaggcatgggattatttcatcttcttatatctgttgaggtctgattt
gtgactgattgcatggtcagttttgagaatgtaccatgaggtgctgagaa
agaggtatattctttttgatataggatgaaatgttctattaggccatttt
ccccccataaacttctgttagtttcactggtctctctgtttagtttctgt
ttccatgatctgtgcattggatgagagtatgg
gaattcctcatttccgttcctgacacaggacatgggaccaagtggtaaat
gcagaagcaccatccataccatggcacagaaacaaaccaattagtgcaga
gtcacgttgaattcatgcctttgggcataaattaattgtatatataggct
gaggtgtcttgttataatgtaagtccttaataatatagaacaagaaaaga
ctcagtatgtacactgtggaggcagactcagtatgtacactgtggaggca
gactcagtatgtacactgtggaggcagactcagtatgtacaccgtggagg
cagactcagtatgtacaccgtggaggcagactcagtatgtacactgtgga
ggcaaagggttcagactgggattgctttccttatgtaggatcttaaaatg
ttatttcagacatttaaaaataaagtcatcacttgtgctgtgtctccaaa
gttaggaatattccctggggccaatgatggaacactgtgcatattttcct
aaggggtaagggcaaagaggcattagattttccgtttagatctctggggc
agattccaagggcctttcttcttcaccttgccctggggttacggaaaaca
agctgttgccaacccggctctgcagttgattctcaggcaccaggagggcc
ccctttgggcagagctgtggcaagaagaagggtattgtctaaacccaagt
tcagtctttggattttctaaaccaatattctcagagtcacgaatcatcct
cactctccaagtctcaagcttctcccacagtgtgaagtgctggactttag
ctctttaggtttggctttgctttgtacatctatgtgcagggtcacaggct
gtggtgtgtttacaaacacaggaaaagattccacagaggcgtctaaaccc
ataacaagtgggaatttattgccttctaaaaatagcaaggggctattctt
ttcagaaagaaaaaaaaggtcaaacattttgcaattgtttttcaatagat
agggaacacattttcccaatttattgagaccacatttttttaaaatgtta
aaggacaagtcagcctgggtagagcaaggcctgatgaatatacgccttca
aggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_4147075_4148165
seq2: B6Ng01-302I13.g_65_1169

seq1  GAATTCCTCATTTCAGTTCCTGACACAGGACATGGGACCAAGTGGTAAAT  50
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCATTTCCGTTCCTGACACAGGACATGGGACCAAGTGGTAAAT  50

seq1  GCAGAAGCACCATCCATACCATGGCACAGAAACAAACCAATTAGTGCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGCACCATCCATACCATGGCACAGAAACAAACCAATTAGTGCAGA  100

seq1  GTCACGTTGAATTCATGCCTTTGGGCATAAATTAATTGTATATATAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACGTTGAATTCATGCCTTTGGGCATAAATTAATTGTATATATAGGCT  150

seq1  GAGGTGTCTTGTTATAATGTAAGTCCTTAATAATATAGAACAAGAAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGTCTTGTTATAATGTAAGTCCTTAATAATATAGAACAAGAAAAGA  200

seq1  CTCAGTATGTACACTGTGGAGGCAGACTCAGTATGTACACTGTGGAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTATGTACACTGTGGAGGCAGACTCAGTATGTACACTGTGGAGGCA  250

seq1  GACTCAGTATGTACACTGTGGAGGCAGACTCAGTATGTACACCGTGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGTATGTACACTGTGGAGGCAGACTCAGTATGTACACCGTGGAGG  300

seq1  CAGACTCAGTATGTACACCGTGGAGGCAGACTCAGTATGTACACTGTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTCAGTATGTACACCGTGGAGGCAGACTCAGTATGTACACTGTGGA  350

seq1  GGCAAAGGGTTCAGACTGGGATTGCTTTCCTTATGTAGGATCTTAAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGGGTTCAGACTGGGATTGCTTTCCTTATGTAGGATCTTAAAATG  400

seq1  TTATTTCAGACATTTAAAAATAAAGTCATCACTTGTGCTGTGTCTCCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCAGACATTTAAAAATAAAGTCATCACTTGTGCTGTGTCTCCAAA  450

seq1  GTTAGGAATATTCCCTGGGGCCAATGATGGAACACTGTGCATATTTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGAATATTCCCTGGGGCCAATGATGGAACACTGTGCATATTTTCCT  500

seq1  AAGGGGTAAGGGCAAAGAGGCATTAGATTTTCCGTTTAGATCTCTGGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGTAAGGGCAAAGAGGCATTAGATTTTCCGTTTAGATCTCTGGGGC  550

seq1  AGATTCCAAGGGCCTTTCTTCTTCACCTTGCCCTGGGGTTACGGAAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCAAGGGCCTTTCTTCTTCACCTTGCCCTGGGGTTACGGAAAACA  600

seq1  AGCTGTTGCCAACCCGGCTCTGCAGTTGATTCTCAGGCACCAGGAGGGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTGCCAACCCGGCTCTGCAGTTGATTCTCAGGCACCAGGAGGGCC  650

seq1  CCCTTTGGGCAGAGCTGTGGCAAGAAGAAGGGTATTGTCTAAACCCAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGGGCAGAGCTGTGGCAAGAAGAAGGGTATTGTCTAAACCCAAGT  700

seq1  TCAGTCTTTGGATTTTCTAAACCAATATTCTCAGAGTCACGAATCATCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTTTGGATTTTCTAAACCAATATTCTCAGAGTCACGAATCATCCT  750

seq1  CACTCTCCAAGTCTCAAGCTTCTCCCACAGTGTGAAGTGCTGGACTTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCCAAGTCTCAAGCTTCTCCCACAGTGTGAAGTGCTGGACTTTAG  800

seq1  CTCTTTAGGTTTGGCTTTGCTTTGTACATCTATGTGCAGGGTCACAGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTAGGTTTGGCTTTGCTTTGTACATCTATGTGCAGGGTCACAGGCT  850

seq1  GTGGTGTGTTTACAAACACAGGAAAAGATTCCACAGAGGCGTCTAAACCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTGTTTACAAACACAGGAAAAGATTCCACAGAGGCGTCTAAACCC  900

seq1  ATAACAAGTGGGAA-TTATTGCCTTCTAAAAATAGCAAGGGGCTAT--CT  947
      |||||||||||||| |||||||||||||||||||||||||||||||   |
seq2  ATAACAAGTGGGAATTTATTGCCTTCTAAAAATAGCAAGGGGCTATTCTT  950

seq1  TTCAGAAAGAAAAAAAAGGTCAAACAATTTGCAAT--GTTTTCAATAGAT  995
      |||||||||||||||||||||||||| ||||||||   ||||||||||||
seq2  TTCAGAAAGAAAAAAAAGGTCAAACATTTTGCAATTGTTTTTCAATAGAT  1000

seq1  AGGG-ACACATTTTCCCA--TTATGAAGAACCACA--TTTTTAAAATG-T  1039
      |||| |||||||||||||  ||||  || ||||||  ||||||||||| |
seq2  AGGGAACACATTTTCCCAATTTATTGAG-ACCACATTTTTTTAAAATGTT  1049

seq1  AAAGGACAAGTCAGGCCTGGTAGAGC-AGGCCTGATG-ATATACGC--TC  1085
      |||||||||||||| |  |||||||| |||||||||| ||||||||  ||
seq2  AAAGGACAAGTCAGCCTGGGTAGAGCAAGGCCTGATGAATATACGCCTTC  1099

seq1  AAGGCC  1091
      ||||||
seq2  AAGGCC  1105