BAC Information

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BAC

Clone NameB6Ng01-306B07
Chromosome18 (Build37)
Map Location 6,147,255 - 6,148,382
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp438, LOC100039442, Zeb1, EG664925, Arhgap12
Downstream geneKif5b, LOC100039469, EG621100, LOC665028, EG622152, Epc1, LOC665047, 4921524L21Rik, LOC100039583, EG665053, Rab18, LOC620787, LOC100039635, Mkx, LOC664778, Armc4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306B07.bB6Ng01-306B07.g
ACCGA099210GA099211
length1,126534
definitionB6Ng01-306B07.b B6Ng01-306B07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctcgcacctgcgtacaaggcttgtttactagttaggcacag
cggaggcccgcgccatcttataatggcgattgctcgcggcacacacggct
ctcctcagagattactggtggcacacatgcgattgctcgcagcacgtacc
ggctcttcacacagacgcatgagtgttttaccactgagtcacacttgagc
attattataatagccttttggagctagctatttggcccagtagtccagca
cttagcccagcatgtgcaaggcctagcactggcacactctgatggtttat
atccattgctaactttttaggatcaaaccaaatctcagggcacgtctctg
aagtgtttcaggttaggaggtaagcccatcatcacggtgaaccattacat
gaacagggatgccagagtcataaaacagaaaacctagctaatcacccaca
tgcaatgtgaccagcaccctctgctccggctgccatgcttcccccaccat
gattaggaccgcctttcaaatgcccagctgaaataaaccctttcttcctt
aagttgctttggtcaggtactttacataactgtgaaattaaaacactgca
aaaataccagtggatgagaagaacaattattatctctatttttttcctct
agaaacttggagaagttgcttgagaagtagaaaacctgttacaaagttcc
tgtcagcatttgaggactacttcctgctcgctccccagccctgccacacc
aacaagtctgggtcaggatagtccctagcacagtgagaatagctcaattt
gatccacattcacttcacaatagggaccctctgcttgaatcttatatttg
cttcactggacctagagcccaagctagccctggccttctcctgagattgt
catcatgctagatcatttatttactatttatttattttagttttttgaga
cagggtttctgtgtatagccttggctgtcctggaactcactgtgtagacc
aggctgggccttgaactcagaaatcgccttactctgcctatgctagacca
ttaaaacactcttcataagaggagtgtcagagcctttaacttccttagca
ggacttcagctgcttcccattttgtc
agctgaggttttagaggatgcttgagaatggcaccttgcctgggtaactc
ctatgaaagaggataaccttatgcatttcatattttgttttcactacctc
taacttcagagacaattgctttcacagcttgttcaaacacagaaatgtga
tgtgactttttctttttttcttctaatcccaggtgtgggatatgggactg
cttcagattgtccacagcaggtaactatgatttgtctcctgctctggcag
gggtacgattctgtcagctgaagacaatatacattgggaattctggtgac
ttttcaaagggtgtataaatttcagagccctgagaaaggtaactgctgca
gctcctgctgcgagattgctggattgcaggattgcaggattgtatatcct
gacaacaaggataaaattgcccccagaattcaacacacctaatcagcaca
aagtagtactagatcaattctccttttcccctatatcctttttctctccc
acctagtgttggggagttggtagggatatgggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_6147255_6148382
seq2: B6Ng01-306B07.b_48_1173

seq1  GAATTCACTCTCGCACCTGCGTACAAGGCTTGTTTACTAGTTAGGCACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTCGCACCTGCGTACAAGGCTTGTTTACTAGTTAGGCACAG  50

seq1  CGGAGGCCCGCGCCATCTTATAATGGCGATTGCTCGCGGCACACACGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGGCCCGCGCCATCTTATAATGGCGATTGCTCGCGGCACACACGGCT  100

seq1  CTCCTCAGAGATTACTGGTGGCACACATGCGATTGCTCGCAGCACGTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCAGAGATTACTGGTGGCACACATGCGATTGCTCGCAGCACGTACC  150

seq1  GGCTCTTCACACAGACGCATGAGTGTTTTACCACTGAGTCACACTTGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTTCACACAGACGCATGAGTGTTTTACCACTGAGTCACACTTGAGC  200

seq1  ATTATTATAATAGCCTTTTGGAGCTAGCTATTTGGCCCAGTAGTCCAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATAATAGCCTTTTGGAGCTAGCTATTTGGCCCAGTAGTCCAGCA  250

seq1  CTTAGCCCAGCATGTGCAAGGCCTAGCACTGGCACACTCTGATGGTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCCAGCATGTGCAAGGCCTAGCACTGGCACACTCTGATGGTTTAT  300

seq1  ATCCATTGCTAACTTTTTAGGATCAAACCAAATCTCAGGGCACGTCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTGCTAACTTTTTAGGATCAAACCAAATCTCAGGGCACGTCTCTG  350

seq1  AAGTGTTTCAGGTTAGGAGGTAAGCCCATCATCACGGTGAACCATTACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTTCAGGTTAGGAGGTAAGCCCATCATCACGGTGAACCATTACAT  400

seq1  GAACAGGGATGCCAGAGTCATAAAACAGAAAACCTAGCTAATCACCCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGGGATGCCAGAGTCATAAAACAGAAAACCTAGCTAATCACCCACA  450

seq1  TGCAATGTGACCAGCACCCTCTGCTCCGGCTGCCATGCTTCCCCCACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATGTGACCAGCACCCTCTGCTCCGGCTGCCATGCTTCCCCCACCAT  500

seq1  GATTAGGACCGCCTTTCAAATGCCCAGCTGAAATAAACCCTTTCTTCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGGACCGCCTTTCAAATGCCCAGCTGAAATAAACCCTTTCTTCCTT  550

seq1  AAGTTGCTTTGGTCAGGTACTTTACATAACTGTGAAATTAAAACACTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCTTTGGTCAGGTACTTTACATAACTGTGAAATTAAAACACTGCA  600

seq1  AAAATACCAGTGGATGAGAAGAACAATTATTATCTCTATTTTTTTCCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACCAGTGGATGAGAAGAACAATTATTATCTCTATTTTTTTCCTCT  650

seq1  AGAAACTTGGAGAAGTTGCTTGAGAAGTAGAAAACCTGTTACAAAGTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTTGGAGAAGTTGCTTGAGAAGTAGAAAACCTGTTACAAAGTTCC  700

seq1  TGTCAGCATTTGAGGACTACTTCCTGCTCGCTCCCCAGCCCTGCCACACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCATTTGAGGACTACTTCCTGCTCGCTCCCCAGCCCTGCCACACC  750

seq1  AACAAGTCTGGGTCAGGATAGTCCCTAGCACAGTGAGAATAGCTCAA-TT  799
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AACAAGTCTGGGTCAGGATAGTCCCTAGCACAGTGAGAATAGCTCAATTT  800

seq1  GATCCACATTCACTTCACAATAGGGACCCTCTGCTTGAATCTTATATTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCACATTCACTTCACAATAGGGACCCTCTGCTTGAATCTTATATTTG  850

seq1  CTTCACTGGACCTAGAGCCCAAGCTAGCCCTGGCCTTCTCCTGAGATTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTGGACCTAGAGCCCAAGCTAGCCCTGGCCTTCTCCTGAGATTGT  900

seq1  CATCATGCTAGATCATTTATTTACTATTTATTTATTTTAGTTTTTTGAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGCTAGATCATTTATTTACTATTTATTTATTTTAGTTTTTTGAGA  950

seq1  CAGGGTTTCTGTGTATAGCCTTGGCTGTCCTGGAACTCACTGTGTAGACC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTTCTGTGTATAGCCTTGGCTGTCCTGGAACTCACTGTGTAGACC  1000

seq1  AGGCT-GGCCTTGAACTCAGAAATCCGCCTACCTCTGCCTATGCTAGACC  1048
      ||||| |||||||||||||||||| |||||  ||||||||||||||||||
seq2  AGGCTGGGCCTTGAACTCAGAAAT-CGCCTTACTCTGCCTATGCTAGACC  1049

seq1  ATTTAAAACACTC-TCATTAGAGAAGTGTCAAGAGCC-TTAACTTCCCTA  1096
      | ||||||||||| |||| |||| |||||| |||||| ||||||||| ||
seq2  A-TTAAAACACTCTTCATAAGAGGAGTGTC-AGAGCCTTTAACTTCCTTA  1097

seq1  GCAGAACCTCAGCTTGCTTTTCCCATTTTGTC  1128
      |||| || ||||| |||  |||||||||||||
seq2  GCAGGACTTCAGC-TGC--TTCCCATTTTGTC  1126