BAC Information

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BAC

Clone NameB6Ng01-308A15
Chromosome18 (Build37)
Map Location 84,141,653 - 84,258,836
singlet/doubletdoublet
Overlap geneTshz1, Zadh2
Upstream geneZfp516, LOC100041001, 4921531P14Rik, LOC665284
Downstream geneLOC669856, Zfp407, Cndp1, EG640234, Cndp2, LOC100039711, LOC100039725, B230399E16Rik, Cyb5, Fbxo15, 1700034H14Rik, LOC100039765
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308A15.bB6Ng01-308A15.g
ACCGA100644GA100645
length1,107816
definitionB6Ng01-308A15.b B6Ng01-308A15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,141,653 - 84,142,764)(84,258,026 - 84,258,836)
sequence
gaattcattaaggtaaagtctaaagaaagaccgggagttaaaatgcctgc
gtggctggggataatctcagcaggtagatttcaacagtttgcagaggact
ctgaacattctttccggtattagcagagtggccaacaccctttcggactg
gggctggtattcagcagctctgcggttctctttcacatggtgtccagaac
tcaagttcagataaggtctatagagagagaagaaaataatagattacagt
tgccagagctttgggacatggaagctagtcacaccaggcaagtcatccaa
ggaggtctttctataaaaaggaccacaggacacttttcaaggattacaca
gactggcttcatccatttttaccctttccttgctaggaggaacagaacac
ttcttccttttgctggttgagtctacctcctatacccttaacacagcacc
atgggccataccaggatgtctactcggacgtttcagggatctagtatcac
aattaggaaggtattgaagtctgttctatttttatcgacacaaagctcca
tagagatgcgcttctatggtctttctagcaatgcagagagacttcatcct
ctgcagactgcaacctacacggaggtccttcagggatctggtcaatgttc
tcaatgaatcatgagaatgaaccatggcctatgtgtaaaccaggaagtgc
ttcatgtcctccagctgcctccttgcgtgccccattgaggttcaagataa
caaacaaaaaaaagatcccagcctccaatcaaccacactgtcaagacaag
tagttgtacgtgattccctatttcctggaggcagtcccaagcaggcctga
ctatggcatggagcggctgagtctccaaatccaccaaggagggagaagcc
agactctggaagctggcattcccatctccttgggccagcatctgcctctc
cctaagcatttcatgtctgtgtgtctatgttccatgaaataggacataaa
ggccactctcagttgttggaagagtcaaggagtgacctgtgttgactatt
tctaaatacactgtttaaccattcaaccttaaactcaattctattgaaac
ctgcagt
gaattcttcactcctccaggcttctttggaaagttgataggaacctttaa
actggactgattggactaatctttacacccagctacttgagtagttaagt
ttcgccattttggccttccaggatacctagggtactttctggtacagagt
ttactgcttggatataaccagaactcccctcttccggaattttatccagc
ttccaacacaccgggctgggaccttcgaaatggcacagaggaaccccccc
cccccacagtccagcattgagaggatgctcccagcagacctcagtgtggt
atgacctgaactgagcacagtaaagtcccacacttcctccacttcacccc
ttaataaagattagcgatgtggaaaatcattaaggtgggaagcctggggt
agaaaagtcagatctggcaacaactagtgtgccacccgaatgtctgcaat
gcattcaggcaaatgcagccatgcccccgcccaaccttggctcaattgcc
ggtgcacgcccccgttttgcactcaggggacagagcacagtcaaatgaca
tgcagactaggtgcacaccaacacacccaagaacaagccccaccaatacg
agatagaggggacaggaaaaagcaagccgaaacatgggccccccattcct
ccaaagcacgtttacctaaacgttcgcagtgtgtgtccaggctgttgctg
ctccactaaaaattatggaacgcaggcaccgtgggtgcgcgcggggtggg
ccgggtggggagcctccctttctgggtcccgtcgtttttattttagggag
cgggaagggggaggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_84141653_84142764
seq2: B6Ng01-308A15.b_46_1152

seq1  GAATTCATTAAGGTAAAGTCTAAAGAAAGACCGGGAGTTAAAATGCCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAGGTAAAGTCTAAAGAAAGACCGGGAGTTAAAATGCCTGC  50

seq1  GTGGCTGGGGATAATCTCAGCAGGTAGATTTCAACAGTTTGCAGAGGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGGGGATAATCTCAGCAGGTAGATTTCAACAGTTTGCAGAGGACT  100

seq1  CTGAACATTCTTTCCGGTATTAGCAGAGTGGCCAACACCCTTTCGGACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACATTCTTTCCGGTATTAGCAGAGTGGCCAACACCCTTTCGGACTG  150

seq1  GGGCTGGTATTCAGCAGCTCTGCGGTTCTCTTTCACATGGTGTCCAGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGTATTCAGCAGCTCTGCGGTTCTCTTTCACATGGTGTCCAGAAC  200

seq1  TCAAGTTCAGATAAGGTCTATAGAGAGAGAAGAAAATAATAGATTACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTCAGATAAGGTCTATAGAGAGAGAAGAAAATAATAGATTACAGT  250

seq1  TGCCAGAGCTTTGGGACATGGAAGCTAGTCACACCAGGCAAGTCATCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGAGCTTTGGGACATGGAAGCTAGTCACACCAGGCAAGTCATCCAA  300

seq1  GGAGGTCTTTCTATAAAAAGGACCACAGGACACTTTTCAAGGATTACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTCTTTCTATAAAAAGGACCACAGGACACTTTTCAAGGATTACACA  350

seq1  GACTGGCTTCATCCATTTTTACCCTTTCCTTGCTAGGAGGAACAGAACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGCTTCATCCATTTTTACCCTTTCCTTGCTAGGAGGAACAGAACAC  400

seq1  TTCTTCCTTTTGCTGGTTGAGTCTACCTCCTATACCCTTAACACAGCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTTTTGCTGGTTGAGTCTACCTCCTATACCCTTAACACAGCACC  450

seq1  ATGGGCCATACCAGGATGTCTACTCGGACGTTTCAGGGATCTAGTATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCCATACCAGGATGTCTACTCGGACGTTTCAGGGATCTAGTATCAC  500

seq1  AATTAGGAAGGTATTGAAGTCTGTTCTATTTTTATCGACACAAAGCTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGAAGGTATTGAAGTCTGTTCTATTTTTATCGACACAAAGCTCCA  550

seq1  TAGAGATGCGCTTCTATGGTCTTTCTAGCAATGCAGAGAGACTTCATCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATGCGCTTCTATGGTCTTTCTAGCAATGCAGAGAGACTTCATCCT  600

seq1  CTGCAGACTGCAACCTACACGGAGGTCCTTCAGGGATCTGGTCAATGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGACTGCAACCTACACGGAGGTCCTTCAGGGATCTGGTCAATGTTC  650

seq1  TCAATGAATCATGAGAATGAACCATGGCCTATGTGTAAACCAGGAAGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGAATCATGAGAATGAACCATGGCCTATGTGTAAACCAGGAAGTGC  700

seq1  TTCATGTCCTCCAGCTGCCTCCTTGCGTGCCCCATTGAGGTTCAAGATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTCCTCCAGCTGCCTCCTTGCGTGCCCCATTGAGGTTCAAGATAA  750

seq1  CAAACAAAAAAAAGATCCCAGCCTCCAATCAACCACACTGTCAAGACAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAAAAAAGATCCCAGCCTCCAATCAACCACACTGTCAAGACAAG  800

seq1  TAGTTGTACGTGATTCCCTATTTCCTGGAGGCAGTCCCAAGCAGGCCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGTACGTGATTCCCTATTTCCTGGAGGCAGTCCCAAGCAGGCCTGA  850

seq1  CTATGGCATGGAGCGGCTGAGTCTCCAAATCCACCAAGGAGGGAGAAGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGCATGGAGCGGCTGAGTCTCCAAATCCACCAAGGAGGGAGAAGCC  900

seq1  AGACTCTGGAAGCTGGCATTCCCATCTCCTT-GGCCAGCATCTGCCTCTC  949
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGACTCTGGAAGCTGGCATTCCCATCTCCTTGGGCCAGCATCTGCCTCTC  950

seq1  CCTAAGCATTTCAATGTCTGTGTGTCTATTGTTCCATGAAATAGGAACAA  999
      |||||||||||| ||||||||||||||| |||||||||||||||| ||| 
seq2  CCTAAGCATTTC-ATGTCTGTGTGTCTA-TGTTCCATGAAATAGG-ACAT  997

seq1  TAAAGCCACTCTCAGTTGTTGGAAGAGGCCAAAGGAGTGACCTGTGTGAA  1049
       || ||||||||||||||||||||||| |  ||||||||||||||||  |
seq2  AAAGGCCACTCTCAGTTGTTGGAAGAGTC--AAGGAGTGACCTGTGTTGA  1045

seq1  CTATTTCCTAAATACACTGTTTTAACCAATTCAA-CTTACACTCAATTCT  1098
      |||||| |||||||||||| ||||||| |||||| |||| ||||||||||
seq2  CTATTT-CTAAATACACTG-TTTAACC-ATTCAACCTTAAACTCAATTCT  1092

seq1  ATT-AAAACTGCAGT  1112
      ||| ||| |||||||
seq2  ATTGAAACCTGCAGT  1107

seq1: chr18_84258026_84258836
seq2: B6Ng01-308A15.g_69_884 (reverse)

seq1  CTCCTCCCCC-TCCCGCTCCCT-AAATAAAAACGACGGGACCCAGAAAGG  48
      |||||||||| ||||||||||| |||||||||||||||||||||||||||
seq2  CTCCTCCCCCTTCCCGCTCCCTAAAATAAAAACGACGGGACCCAGAAAGG  50

seq1  GAGGCTCCCCACCCGGCCCA-CCCGCGCGCACCCACGGTGCCTGCGTTCC  97
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAGGCTCCCCACCCGGCCCACCCCGCGCGCACCCACGGTGCCTGCGTTCC  100

seq1  ATAATTTTTAGTGGAGCAGCAACAGCCTGGACACACACTGCG-ACGTTTA  146
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATAATTTTTAGTGGAGCAGCAACAGCCTGGACACACACTGCGAACGTTTA  150

seq1  GGTAAACGTGCTTTGGAGGAATGGGGGGCCCATG-TTCGGCTTGCTTTTT  195
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GGTAAACGTGCTTTGGAGGAATGGGGGGCCCATGTTTCGGCTTGCTTTTT  200

seq1  CCTGTCCCCTCTATCTCGTATTGGTGGGGCTTGTTCTTGGGTGTGTTGGT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCCCTCTATCTCGTATTGGTGGGGCTTGTTCTTGGGTGTGTTGGT  250

seq1  GTGCACCTAGTCTGCATGTCATTTGACTGTGCTCTGTCCCCTGAGTGCAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACCTAGTCTGCATGTCATTTGACTGTGCTCTGTCCCCTGAGTGCAA  300

seq1  AACGGGGGCGTGCACCGGCAATTGAGCCAAGGTTGGGCGGGGGCATGGCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGGGGCGTGCACCGGCAATTGAGCCAAGGTTGGGCGGGGGCATGGCT  350

seq1  GCATTTGCCTGAATGCATTGCAGACATTCGGGTGGCACACTAGTTGTTGC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGCCTGAATGCATTGCAGACATTCGGGTGGCACACTAGTTGTTGC  400

seq1  CAGATCTGACTTTTCTACCCCAGGCTTCCCACCTTAATGATTTTCCACAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTGACTTTTCTACCCCAGGCTTCCCACCTTAATGATTTTCCACAT  450

seq1  CGCTAATCTTTATTAAGGGGTGAAGTGGAGGAAGTGTGGGACTTTACTGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTAATCTTTATTAAGGGGTGAAGTGGAGGAAGTGTGGGACTTTACTGT  500

seq1  GCTCAGTTCAGGTCATACCACACTGAGGTCTGCTGGGAGCATCCTCTCAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTTCAGGTCATACCACACTGAGGTCTGCTGGGAGCATCCTCTCAA  550

seq1  TGCTGGACTGTGGGGGGGGGGGGTTCCTCTGTGCCATTTCGAAGGTCCCA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGACTGTGGGGGGGGGGGGTTCCTCTGTGCCATTTCGAAGGTCCCA  600

seq1  GCCCGGTGTGTTGGAAGCTGGATAAAATTCCGGAAGAGGGGAGTTCTGGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGGTGTGTTGGAAGCTGGATAAAATTCCGGAAGAGGGGAGTTCTGGT  650

seq1  TATATCCAAGCAGTAAACTCTGTACCAGAAAGTACCCTAGGTATCCTGGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCAAGCAGTAAACTCTGTACCAGAAAGTACCCTAGGTATCCTGGA  700

seq1  AGGCCAAAATGGCGAAACTTAACTACTCAAGTAGCTGGGTGTAAAGATTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAAAATGGCGAAACTTAACTACTCAAGTAGCTGGGTGTAAAGATTA  750

seq1  GTCCAATCAGTCCAGTTTAAAGGTTCCTATCAACTTTCCAAAGAAGCCTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAATCAGTCCAGTTTAAAGGTTCCTATCAACTTTCCAAAGAAGCCTG  800

seq1  GAGGAGTGAAGAATTC  811
      ||||||||||||||||
seq2  GAGGAGTGAAGAATTC  816