BAC Information

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BAC

Clone NameB6Ng01-314N21
Chromosome18 (Build37)
Map Location 46,018,888 - 46,019,977
singlet/doubletsinglet
Overlap genenone
Upstream geneYthdc2, LOC626309, LOC225457, LOC100042900, Kcnn2
Downstream geneTrim36, LOC100042905, Pggt1b, Ccdc112, EG225468, LOC100042916, Mospd4, LOC100042204, Fem1c, Ticam2, Eif1a, LOC100042226, Cdo1, Atg12, Ap3s1, LOC100042950, 4833403I15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314N21.bB6Ng01-314N21.g
ACCGA105667GA105668
length1,1501,055
definitionB6Ng01-314N21.b B6Ng01-314N21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctattgagtatttttgcatcaatatttataagcaagattggtctg
aaggtctcctttatggttggtccttgtgtggtttaggtatcagagtaatt
gtggcttcatagaacaagttaggtagtgttccttctgtttatattttatg
gaattgtttaagaaaaattggtatcaggtcttctttgagagtctggtaga
attctgcactaaatccatttggccctggacttttttttgtctgggagatt
tttaacactatttccttgtgtgatatgggcccatttaggtagttaactgc
tcttgatttaactttggtatgtggcatctgtctagaaaactatctatttc
atctaggtttcctagttttgtggaatataggcttttagagtaggatctga
tgatagtttgaatttcctccatttctgttgttatgtctcccttttcattt
ctcattttattaatttggatactgcttcttggccctttagttagtttggc
taggggtttatatatcttgttgattctttcaaagagccaacttttggttt
tgctgattttttgtattgttttctttgtttctatttgattgatttctgcc
ctgagtttgactatttcctgacttttactcctcttgggtgagtttgcttc
tttttgttctagagctctcaggtgtgctgttaagttgttagtgtaagatc
tctttagtttctttaccagggctcttattgctatgaactttcctcttaac
actgctttcactgtgtcccatacctttgggtatgatgtgtcaacattttc
attaaattccaggaaatctttaattttttttctttatttcttccctgacc
aagttatcattgagtaaagaattgttcagtttccacatatatgcgggctt
tctatagtttttgctgttattgaaaaccagccttaggccatgtgatttga
tagatgcatgggattattcaatcatctgtgtctgtgagtttgttttggga
ccatacatgtcatttagagagtaccatgagatctgaaaggacgtgtatcg
tgttagctggaatgggctatctgtaatcaatttgttataccttccttaga
tactggtcctgttagttccgattcaatgaaccgtgtctaacacttagtga

gaattcatctgggcttctacagtacttaaacttatctgatccaagtaagg
actgtgatccttgatggcatgattctgcctcattttgtcctgtgctcctt
atatccactgtcaggctcactccagcaggcaaaaagtcgttgcctgaagg
atgcccttctgcaaagttgtttcagcagatccgacagtagaaaggagtat
gtccataaattcagattcatcagaagtctctacctagcaatgcaaataca
actcactgtactaggaggttttcttagaggaacagaacttatgaagtaaa
tttatatgtagagagaaaggcgatttattagaatggctcacaggctgttg
tccagctagtccaaaatgactgtctactaatggaaggtccaagaattcag
tatttgctcagtccacaaggctgaatgtctcagctgatctttagtatatg
cctaaatcccaaagtgcagtctaaagccagtgaaggaatggacttgctag
caaaagtgagagcaaacaaagaaagcacgcttccttctctcaggtctttc
tacaggccaccagcagaaggtgtggtgcagataagggcagatatccagac
taaatgttggtcttcacacttcaaattattttattaagaaaaattccctc
atgaagagcaagctgcacatctgctacatggccctcacccattctgagaa
ggggaggaaggaatgagggaaggattgtgcgagaggtgaccaggaaaggg
gcagtgagcaggatataaagtgaataagtaaaaaataaacaaatttttaa
aactggatgggaacaaatgtgggaaaagaaaagaaaagaagagagagaaa
ggaaagagagagagagagagagagagagagagagagagagagagagagag
agagacgagaagagagagaggaaagaaatgagatagaactagagagaaga
gagagagagaagagagagtagagaggagtagagagagagagagagagata
acttcgctcctggtgtgcactcgaatgttgagtttcagttaatcgatgtc
atcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_46018888_46019977
seq2: B6Ng01-314N21.g_64_1118

seq1  GAATTCATCTGGGCTTCTACAGTACTTAAACTTATCTGATCCAAGTAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTGGGCTTCTACAGTACTTAAACTTATCTGATCCAAGTAAGG  50

seq1  ACTGTGATCCTTGATGGCATGATTCTGCCTCATTTTGTCCTGTGCTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGATCCTTGATGGCATGATTCTGCCTCATTTTGTCCTGTGCTCCTT  100

seq1  ATATCCACTGTCAGGCTCACTCCAGCAGGCAAAAAGTCGTTGCCTGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCACTGTCAGGCTCACTCCAGCAGGCAAAAAGTCGTTGCCTGAAGG  150

seq1  ATGCCCTTCTGCAAAGTTGTTTCAGCAGATCCGACAGTAGAAAGGAGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTTCTGCAAAGTTGTTTCAGCAGATCCGACAGTAGAAAGGAGTAT  200

seq1  GTCCATAAATTCAGATTCATCAGAAGTCTCTACCTAGCAATGCAAATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATAAATTCAGATTCATCAGAAGTCTCTACCTAGCAATGCAAATACA  250

seq1  ACTCACTGTACTAGGAGGTTTTCTTAGAGGAACAGAACTTATGAAGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTGTACTAGGAGGTTTTCTTAGAGGAACAGAACTTATGAAGTAAA  300

seq1  TTTATATGTAGAGAGAAAGGCGATTTATTAGAATGGCTCACAGGCTGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATGTAGAGAGAAAGGCGATTTATTAGAATGGCTCACAGGCTGTTG  350

seq1  TCCAGCTAGTCCAAAATGACTGTCTACTAATGGAAGGTCCAAGAATTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTAGTCCAAAATGACTGTCTACTAATGGAAGGTCCAAGAATTCAG  400

seq1  TATTTGCTCAGTCCACAAGGCTGAATGTCTCAGCTGATCTTTAGTATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCTCAGTCCACAAGGCTGAATGTCTCAGCTGATCTTTAGTATATG  450

seq1  CCTAAATCCCAAAGTGCAGTCTAAAGCCAGTGAAGGAATGGACTTGCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATCCCAAAGTGCAGTCTAAAGCCAGTGAAGGAATGGACTTGCTAG  500

seq1  CAAAAGTGAGAGCAAACAAAGAAAGCACGCTTCCTTCTCTCAGGTCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTGAGAGCAAACAAAGAAAGCACGCTTCCTTCTCTCAGGTCTTTC  550

seq1  TACAGGCCACCAGCAGAAGGTGTGGTGCAGATAAGGGCAGATATCCAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGCCACCAGCAGAAGGTGTGGTGCAGATAAGGGCAGATATCCAGAC  600

seq1  TAAATGTTGGTCTTCACACTTCAAATTATTTTATTAAGAAAAATTCCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTGGTCTTCACACTTCAAATTATTTTATTAAGAAAAATTCCCTC  650

seq1  ATGAAGAGCAAGCTGCACATCTGCTACATGGCCCTCACCCATTCTGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAGCAAGCTGCACATCTGCTACATGGCCCTCACCCATTCTGAGAA  700

seq1  GGGGAGGAAGGAATGAGGGAAGGATTGTGCGAGAGGTGACCAGGAAAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGAAGGAATGAGGGAAGGATTGTGCGAGAGGTGACCAGGAAAGGG  750

seq1  GCAGTGAGCAGGATATAAAGTGAATAAGTAAAAAATAAACAAATTTTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGAGCAGGATATAAAGTGAATAAGTAAAAAATAAACAAATTTTTAA  800

seq1  AACTGGATGGGAACAAATGTGGAAAAAGAAAAGAAAAGAAGAGAAGAGAA  850
      |||||||||||||||||||||| |||||||||||||||||||| |||| |
seq2  AACTGGATGGGAACAAATGTGGGAAAAGAAAAGAAAAGAAGAG-AGAG-A  848

seq1  AAGGAAAAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGA  900
      |||||    ||||| |||| |||| |||| |||| |||| |||| |||| 
seq2  AAGGA----AAGAG-AGAG-AGAG-AGAG-AGAG-AGAG-AGAG-AGAG-  886

seq1  AGAGAAGAGAAGAGA-AGAGACGAGAAGAGAAGAGAGGAAAAGAAAAGAA  949
      |||| |||| ||||| |||||||||||||| ||||||| ||||||| |  
seq2  AGAG-AGAG-AGAGAGAGAGACGAGAAGAG-AGAGAGG-AAAGAAATG--  930

seq1  GAAAAGAAACAAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA  999
          ||| | ||  ||   ||||||||| |||| ||||||||| |||| |
seq2  ----AGATAGAACTAG---AGAGAAGAG-AGAG-AGAGAAGAG-AGAGTA  970

seq1  GAGAAGAGAAGAGAAGAGAAGAGA-AGAGAAAAATTCGCTCACAGGTGTG  1048
      |||| ||| |||| |||| ||||| ||||| || ||||||| | ||||||
seq2  GAGAGGAGTAGAG-AGAG-AGAGAGAGAGATAACTTCGCTC-CTGGTGTG  1017

seq1  CACTCAGATGTTTGAGTTTCAGTAAATTCCAGATGTCATCAG  1090
      |||||  ||| |||||||||||| |||    |||||||||||
seq2  CACTCGAATG-TTGAGTTTCAGTTAAT---CGATGTCATCAG  1055