BAC Information

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BAC

Clone NameB6Ng01-316F21
Chromosome18 (Build37)
Map Location 18,217,615 - 18,218,131
singlet/doubletsinglet
Overlap genenone
Upstream gene4921533I20Rik, LOC100040647
Downstream geneLOC100040658
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316F21.bB6Ng01-316F21.g
ACCGA106781GA106782
length1,1981,157
definitionB6Ng01-316F21.b B6Ng01-316F21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
tacgaggtacgcctggccttgaactttctaaggaaattcaagacagtcta
tcagaagtaaagtggaaaatgtttggccttgaattttttctaatgttagg
agcccttttgttccttttcacatgttatcaggtgattaagatagggctga
aaattctggatgaaattcagggcaatctatcagaagtaaagcggggagag
agagtaggagcaaagagaaaatatggtacacaaaataagtatacaggcct
ttccaagggtcttgaacccgaggaaaagtttaggtcaggtaagaatacct
ggggagagattagaaggaaggaaaagaaaaaagaaaagaaaaaagatcga
ttagcggaggtctctaggagatactcgtcactagatgagctcaggaagcc
agctcttagtagctctgaagcagatgaagaattctcctctgaggaaacag
actgggaggaagaagcagcccattaccagccagctaattggtcaagaaaa
aagccaaaagcggctggcaaaagccagcgtactgttcaacctcccggcag
tcggtttcaaggtccgccctatgcggagcccccgccctgcgtagtgcgtc
agcaatgcgcagagaggcaatgcgcagagagatgcgcagagaggcaatgc
gcagagagatgcgcagagaggcaatgcgcagagagatgcgcagagaggca
atgcgcagagagatgcgcagagaggcaatgcgcagagagatgcgcagaga
ggcagtgcgcagagaggcagtgcgcagagaggcagtgcgcagactcattc
attcccagagaggaacaaaggaaaatacaacagacatttccagtctttga
aggagccgagggtgggcgtgtccacgctccggtaaaatacttacaaatta
aagaactcgccgagtcggtccgtaaatacggaaccaatgctaattttacc
ttgggtgcagttagacaggctcgcggcatggcactactcctgctgactgg
caacgattgtaaaggcgctcttcctagtatgggacaaatattatggaatg
ggagagcgctttgggcacgaagcttgcacaggccaggctcagctaatgcg
cagcctgctttgaactctccagactcaagaagagaaatgtgggaccac
gaattccataaaatattatctcaatttagaagtatcctagaggccaagtt
ttctgggctggtttttgccacgtgttgttatttaaaatgactccaatact
gagttatcaatttaaagctaacgtttttgtaaccaatgttacctttttga
tcatacccaataatttataagccaatatattatgaccaagatatgcagag
catatttacacctttaagactagtcaaaaaccaaatgaagtgactacact
aatcttataaatttcgacaaatcaaagaattttactttttctaggtataa
ttttaagataaaaaacactttgtcattttctgaacccaattgcagagaat
tttctacgaaaacaccaactatcagctatttttgccttagaactaagaag
ctgcatactcctttttttaaaaacagtttttcagcaggagcttccttgct
gtgcttcactcctggctacagtgcagggcaaattaaatcagcctccgctg
ggtagactaactatatcaagagatggatagccagcagataaaggtttaac
catttttttcaacatgaaacaaaacaacagtcattcatacaacgaaacaa
agatagacatgaattaacacatggacatatattggtgaatcaaacacaaa
caacacagagaaggtagaaaacttgatgttaccaaatctaagagtgtctc
cggtaggagtagacactcgagagagaaagccagatgtctccagatttccg
tgtccctgagagagttctgaaatccattttccttctttcttgatctctct
ttatatatatagatttttttttgaatttttactatttttatattatttta
ttattttaagccctactcctctcgcctgatgcagttcttgactgcggaca
aatgcctgttttctttttcactcccattttccactgtcaacctctcactg
atatcagagctgggccaacactgactcagtctaacctggtgtccctttgc
actactgcacattgaaaagatgagttaaggccagcactagcatgaataca
aagtgtgctcacctatgcagatacatcttctcttaatctttcttgtaagg
ctctacctagacagggttatctcttgtgatcacctatcttcaggtcactg
ttcggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_18217615_18218131
seq2: B6Ng01-316F21.g_708_1217 (reverse)

seq1  GACCGAACAGTGACCTGAGTAAGGGTGGATCAACAGAGATAACACTGTCT  50
      ||||||||||||||||||  |  ||| |||||  ||||||||| ||||||
seq2  GACCGAACAGTGACCTGAAGATAGGT-GATCACAAGAGATAACCCTGTCT  49

seq1  TAGTAGAGCTCTACAAGAAAGATTAAGAAGAAGATGTATCTTGCATA-GT  99
        |||||||  |||||||||||||||| |||||||||||| |||||| ||
seq2  AGGTAGAGCCTTACAAGAAAGATTAAG-AGAAGATGTATC-TGCATAGGT  97

seq1  GAGCAACACTTTGTATTCATGCTAGTGCTGGCTTTAAACTTCATCTTTTC  149
      |||| ||||||||||||||||||||||||||| ||||   ||||||||||
seq2  GAGC-ACACTTTGTATTCATGCTAGTGCTGGCCTTAA--CTCATCTTTTC  144

seq1  AAATTGTTGCAGTAGGTGCAAAGGGACA-CAGGTTAGACTGAGTCAGTGT  198
      ||  || ||||||| ||||||||||||| |||||||||||||||||||||
seq2  AA--TG-TGCAGTA-GTGCAAAGGGACACCAGGTTAGACTGAGTCAGTGT  190

seq1  TGGCCCAGCTCTGATATCAGTGAGAGGTTGACAGTGGAAAATGGGAGTGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCAGCTCTGATATCAGTGAGAGGTTGACAGTGGAAAATGGGAGTGA  240

seq1  AAAAGAAAACAGGCATTTGTCCGCAGTCAAGAACTGCATCAGGCGAGAGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAACAGGCATTTGTCCGCAGTCAAGAACTGCATCAGGCGAGAGG  290

seq1  AGTAGGGCTTAAAATAATAAAATAATATAAAAATAGTAAAAATTC-AAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGTAGGGCTTAAAATAATAAAATAATATAAAAATAGTAAAAATTCAAAAA  340

seq1  AAAATCTATATATATAAAGAGAGATCAAGAAAGAAGGAAAATGGATTTCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTATATATATAAAGAGAGATCAAGAAAGAAGGAAAATGGATTTCA  390

seq1  GAACTCTCTCAGGGACACGGAAATCTGGAGACATCTGGCTTTCTCTCTCG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCTCTCAGGGACACGGAAATCTGGAGACATCTGGCTTTCTCTCTCG  440

seq1  AGTGTCTACTCCTACCGGAGACACTCTTAGATTTGGTAACATCAAGTTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTACTCCTACCGGAGACACTCTTAGATTTGGTAACATCAAGTTTT  490

seq1  CTACCTTCTCTGTGTTGTTT  517
      ||||||||||||||||||||
seq2  CTACCTTCTCTGTGTTGTTT  510