BAC Information

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BAC

Clone NameB6Ng01-324G07
Chromosome18 (Build37)
Map Location 89,364,465 - 89,365,391
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039972, LOC623177, LOC665497, LOC100040003, LOC623208, Socs6, Rttn
Downstream geneCd226, Dok6, LOC383320, LOC620693
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324G07.bB6Ng01-324G07.g
ACCGA112719GA112720
length1,1351,031
definitionB6Ng01-324G07.b B6Ng01-324G07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgggatgaagcctacttgatcatggtgaatgatcatgtctttt
tttttttgatgtcttcttgcattcggtctgtgagaattttattgaatatt
tttgcatcaatattcataagtgaaactggcctaaagttcactttctttgc
tgggtctttgtgttgcttaggtatcagagtaattgtggcttcatagaatg
aattaggtactgttctttccatttccagtttggggaatagtttgaggagt
attgatattagctcttctttgaaggtctggtagaattctgcactaaaaca
atttggtcatgggatttttgttgttgttgttgttgttgttggaaggtttt
taatgattacttctacttccataagagttatgggactatctaggtaattt
acctaatcttgattcaactttgttacttggtatctgtatagaaaataatc
catttcatctagattttcgagttttgtagagtataggctcttttagtagg
ttctggtgattttttttttaatttcctgagtttctgttgttattgttggc
attctgtctaaactccatgccatagttcctggcagcagccaggtatgctc
ctacccacagttacctgtcaatagccaggtaggcttggcccactataaaa
agaactgcttggcccctcctctctctcttactctcttatctctcttactc
ttgcttcccgattgcccccccccctttccatttctttccctcctctctcc
atgtggtcataatcatactctacttctctatgctctccttttctctgcct
ttctctgcctctactactctcttaactcccctccccattccctaaataaa
ctccattttatactataccatcctgtggctggtctctcaggaggagggat
accttaccatgggcccactgaggcacccccttccctcacacctgctagag
cattattcttagagctctttctcttttttatgatcacaacagtatgtctc
ctttcatttcttgggtttgttcattagacactagctctgtgcctttcatt
agttgggcttagctgttattatctagttgattcctcaaagaacctagccc
tagaattggttggggagtaggtggagatcttgtgc
gaattcaagtaaaagggctttagagtgaagtttatttccccaggacagtg
aggcatttaaagaactgatgagattcaggtgggtgtattagaaaacttcc
tctgacgcacaataatacatgtgtgtaatggaggaccacactgctacttc
atttccatgctttcagacatacagttagcatagcagccaaggctagcctt
gtaccccaaattatgattaatgtataaggctgtttggcttataatgattt
cttctttgccaaatgtagtcctgctttcctagtatttccattatgacctc
aggcatcagccacatctttcaagttgacttgaccaagaaggggaatgtca
taattttgttaatcaaacaacagataaaattgttatcttttggtgttccc
aagacttagaatatattcttcaagttccaacagtggcactctaatcttaa
tgacatccaacagctgtctaagtagactacagacccactcaatatgagga
aaatgcctggttctagaaacttagataactgccaagggctagtgattttt
aaagagagtcatcactttactagaccatcataattcttaactgcattcta
aaatttatccttagatacagatggtgcatctaactcccagtcaaagaaac
ttctatttatagtagtggccactgtaaaaaagcacaacaggtcataatgt
agaacttaacggattgtggtgattctccttccaattaaacatctatagca
caactcctgcacctaagactcaggggacatcacagaagagagagtggaaa
gattttaagagctagaggatcaggaagtctgcagtgagattgtgtttcct
agacatgacagggaaggtagactcatgatacctcaacaatatggctacct
ataaggtttctgaacaataataatatttttagatatgttaacatggaaag
ggtaaatatcatgggggtctcatatctagacaaaaacagcaggcagctta
tcacttattagggagggagaattatactctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_89364465_89365391
seq2: B6Ng01-324G07.g_65_991

seq1  GAATTCAAGTAAAAGGGCTTTAGAGTGAAGTTTATTTCCCCAGGACAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTAAAAGGGCTTTAGAGTGAAGTTTATTTCCCCAGGACAGTG  50

seq1  AGGCATTTAAAGAACTGATGAGATTCAGGTGGGTGTATTAGAAAACTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTTAAAGAACTGATGAGATTCAGGTGGGTGTATTAGAAAACTTCC  100

seq1  TCTGACGCACAATAATACATGTGTGTAATGGAGGACCACACTGCTACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACGCACAATAATACATGTGTGTAATGGAGGACCACACTGCTACTTC  150

seq1  ATTTCCATGCTTTCAGACATACAGTTAGCATAGCAGCCAAGGCTAGCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATGCTTTCAGACATACAGTTAGCATAGCAGCCAAGGCTAGCCTT  200

seq1  GTACCCCAAATTATGATTAATGTATAAGGCTGTTTGGCTTATAATGATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCCAAATTATGATTAATGTATAAGGCTGTTTGGCTTATAATGATTT  250

seq1  CTTCTTTGCCAAATGTAGTCCTGCTTTCCTAGTATTTCCATTATGACCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTGCCAAATGTAGTCCTGCTTTCCTAGTATTTCCATTATGACCTC  300

seq1  AGGCATCAGCCACATCTTTCAAGTTGACTTGACCAAGAAGGGGAATGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATCAGCCACATCTTTCAAGTTGACTTGACCAAGAAGGGGAATGTCA  350

seq1  TAATTTTGTTAATCAAACAACAGATAAAATTGTTATCTTTTGGTGTTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTGTTAATCAAACAACAGATAAAATTGTTATCTTTTGGTGTTCCC  400

seq1  AAGACTTAGAATATATTCTTCAAGTTCCAACAGTGGCACTCTAATCTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTAGAATATATTCTTCAAGTTCCAACAGTGGCACTCTAATCTTAA  450

seq1  TGACATCCAACAGCTGTCTAAGTAGACTACAGACCCACTCAATATGAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATCCAACAGCTGTCTAAGTAGACTACAGACCCACTCAATATGAGGA  500

seq1  AAATGCCTGGTTCTAGAAACTTAGATAACTGCCAAGGGCTAGTGATTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCTGGTTCTAGAAACTTAGATAACTGCCAAGGGCTAGTGATTTTT  550

seq1  AAAGAGAGTCATCACTTTACTAGACCATCATAATTCTTAACTGCATTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGTCATCACTTTACTAGACCATCATAATTCTTAACTGCATTCTA  600

seq1  AAATTTATCCTTAGATACAGATGGTGCATCTAACTCCCAGTCAAAGAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATCCTTAGATACAGATGGTGCATCTAACTCCCAGTCAAAGAAAC  650

seq1  TTCTATTTATAGTAGTGGCCACTGTAAAAAAGCACAACAGGTCATAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTATAGTAGTGGCCACTGTAAAAAAGCACAACAGGTCATAATGT  700

seq1  AGAACTTAACGGATTGTGGTGATTCTCCTTCCAATTAAACATCTATAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTAACGGATTGTGGTGATTCTCCTTCCAATTAAACATCTATAGCA  750

seq1  CAACTCCTGCACCTAAGACTCAGGGGACATCACAGAAGAGAGAGTGGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCCTGCACCTAAGACTCAGGGGACATCACAGAAGAGAGAGTGGAAA  800

seq1  GATTTTAAGAGCTAGAGGATCAGGAAGTCTGCAGTGAGATTGTGTTTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTAAGAGCTAGAGGATCAGGAAGTCTGCAGTGAGATTGTGTTTCCT  850

seq1  AGACATGACAGGGAAGGTAGACTCATGATACCTCAACAATATGGCTACCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGACAGGGAAGGTAGACTCATGATACCTCAACAATATGGCTACCT  900

seq1  ATAAGGTTTCTGAACAATAATAATATT  927
      |||||||||||||||||||||||||||
seq2  ATAAGGTTTCTGAACAATAATAATATT  927