BAC Information

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BAC

Clone NameB6Ng01-324I10
Chromosome18 (Build37)
Map Location 90,692,859 - 90,694,034
singlet/doubletsinglet
Overlap geneTxndc10
Upstream geneDok6, LOC383320, LOC620693, Eif3s6-ps2, LOC665526
Downstream geneLOC666779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324I10.bB6Ng01-324I10.g
ACCGA112817GA112818
length9821,161
definitionB6Ng01-324I10.b B6Ng01-324I10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttctatttacttgtgtgatattcatctgtttagatagtttacct
gctgttgatttaactttggtatgtgtatctgtctagaaaaccatccattt
catctagaatttccagttttgttgagtataggtttttatagtaggatctg
ttgatattttggatttcctccatttctgttgttatgtctctgttttcatt
tctgatcttgttaatttaggtaccgcctctgggccctttagttagtttag
ctaggggtttatctatcatgttgattctctcaaagaaccagcttctgttt
ttttgttttttttgttttttttttttttttttttttactctgtattgttt
tctttgtttctatttggttgatttccgccctgagtttgactatttcctgc
tttcttctccttttgggtgagtttgcttctttttgttctagagctctcag
gtgtgctgttaagttgcaagtgtaagatctcttcaatttctttaccaggg
cacttagtgctatgaactttcctgttagcaccgttttcattgtgtcctat
aagtttgggtatgacatatcaacattttcattaaattctaggcagttttt
aatttctttctaatttcttccctgaccaagttatcactgagtaaagagtt
gttcagtttccatgtgtatgtgggttttctgaagtttttgctgttattga
agaccagccttaggtcatcgtgatctgatagaatgcatggtattatttca
atcttctagtatcggttgagggttgttttgtgaccaattatgtggttgat
tttgggagaaggtaccataaaggtgctgagaagaaggtgtattcttttgt
cttagagtgaaatgttctgtagatatctgttaaatccatttggttcataa
cctcttcttactttcactgtgtctctgtttagtttctgtttcaatgacct
gtccattggtgagagtggggtgtgaagtctcc
gaattctgtttttgtaatatttatttatttgctgttggtgtgagaaacca
ggaaaagactgtatttgcagcatatacataacttactacttttaagtgtt
tttggggtttgatgcatatcactgcttactagtattctttcagagaaaaa
agtccctaaataatccgacatcaatagtaaaaaattttcttttcatacaa
cattatgaataaatctgacatgtaaaatcaaatcataattcttatgaata
aattattatcattaaatcaaatattaaatattacctcaggaaccacatct
tctgaggcagaaaaaaagtatgtatatacaattaactctgaagcagcatc
tatgtatttctcctatgataacacaaacagaaagaggacatcttaaatat
aaaagatcacaatttatttcccatttaataattaaagctatctataagca
gtaggagaatttcctaccatgtcacctttcagtgaaagaagaaactatag
ccaaaccaaataacactgttgtcaaggtaaataatcactgcaactaagtg
ctcctattctccctttcaaagagagttaatgaattatgaactaagtcagt
ttgggtttcttaacagagatcagcaatgatgaataatgacgatagtgatg
gcagtaaagaaggtatgtacaaacacacacctaagtaaacaggcatagtg
ctttgctttaaaaaggtaacatttgcattgcagttttcagtctttcactt
aaagggctaaaaagtgatgcaaaattaaataatctggtcagtaacataag
aaatactaaggtaggcaatatttacccaaatttttacttacttcactttc
ataatcgcaaatttagtaagagagattgaaagtattttcgttgtgaaaat
acttagatgaactaaaattatttttactttaaggttttgggtaaaatcac
agctttcacagcaaataaatttacaacaatattgtttgtttattgtggaa
gaaaaaggatattccatactttccagggtgattctccacatataccagaa
tacacggtgctctcgtacatgtcgaccatttgttgacctggagagtcgat
agagccctgggtgacgacaatggtatgacttaagtagtgcacattctatt
cacactttatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_90692859_90694034
seq2: B6Ng01-324I10.g_68_1228 (reverse)

seq1  CATAAA-TGTGAATAAAATGTGCACTACCTTTAGCTCATACCCATTTGTT  49
      |||||| |||||||| ||||||||||||  |||  |||||||        
seq2  CATAAAGTGTGAATAGAATGTGCACTAC--TTAAGTCATACC-------A  41

seq1  TTGTTTTCACACAGGGCTCTAATTCGGCCTCTTCCAAGTCAACAAATGTT  99
      ||||  |||| ||||||||||  || | ||| |||| ||||||||||| |
seq2  TTGTCGTCACCCAGGGCTCTA--TC-GACTC-TCCAGGTCAACAAATGGT  87

seq1  CGACCATGTACGGAAGAGGCACCGTGTATTTTTTGTTTATATTGGTGGAG  149
      ||| ||||||||  ||| |||||||||||| |     |||||  ||||||
seq2  CGA-CATGTACG--AGA-GCACCGTGTATTCT---GGTATAT--GTGGAG  128

seq1  AATCACCCTTGAAAGTATGAAATTATCTTTTTCTTCCAC-ATAAACAAAC  198
      ||||||||| ||||||||| |||   ||||||||||||| ||||||||||
seq2  AATCACCCTGGAAAGTATGGAATATCCTTTTTCTTCCACAATAAACAAAC  178

seq1  -ATATTGTTGT-AATTTATTTGCTGTG-AAGCTGTGATTTTA-CCAAAAC  244
       |||||||||| ||||||||||||||| |||||||||||||| |||||||
seq2  AATATTGTTGTAAATTTATTTGCTGTGAAAGCTGTGATTTTACCCAAAAC  228

seq1  CTTAAAGTAAAA--TATTTTAGTTCATCTAAGTATTTTTCACAACGAAAA  292
      ||||||||||||   ||||||||||||||||||| |||||||||||||||
seq2  CTTAAAGTAAAAATAATTTTAGTTCATCTAAGTA-TTTTCACAACGAAAA  277

seq1  TACTTTCAATCTCTCTTACTAAATTTGCGATTATGAAAGTGAAGTAAGTA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCAATCTCTCTTACTAAATTTGCGATTATGAAAGTGAAGTAAGTA  327

seq1  AAAATTTGGGTAAATATTGCCTACCTTAGTATTTCTTATGTTACTGACCA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTGGGTAAATATTGCCTACCTTAGTATTTCTTATGTTACTGACCA  377

seq1  GATTATTTAATTTTGCATCACTTTTTAGCCCTTTAAGTGAAAGACTGAAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTTAATTTTGCATCACTTTTTAGCCCTTTAAGTGAAAGACTGAAA  427

seq1  ACTGCAATGCAAATGTTACCTTTTTAAAGCAAAGCACTATGCCTGTTTAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAATGCAAATGTTACCTTTTTAAAGCAAAGCACTATGCCTGTTTAC  477

seq1  TTAGGTGTGTGTTTGTACATACCTTCTTTACTGCCATCACTATCGTCATT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTGTGTGTTTGTACATACCTTCTTTACTGCCATCACTATCGTCATT  527

seq1  ATTCATCATTGCTGATCTCTGTTAAGAAACCCAAACTGACTTAGTTCATA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCATTGCTGATCTCTGTTAAGAAACCCAAACTGACTTAGTTCATA  577

seq1  ATTCATTAACTCTCTTTGAAAGGGAGAATAGGAGCACTTAGTTGCAGTGA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTAACTCTCTTTGAAAGGGAGAATAGGAGCACTTAGTTGCAGTGA  627

seq1  TTATTTACCTTGACAACAGTGTTATTTGGTTTGGCTATAGTTTCTTCTTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTACCTTGACAACAGTGTTATTTGGTTTGGCTATAGTTTCTTCTTT  677

seq1  CACTGAAAGGTGACATGGTAGGAAATTCTCCTACTGCTTATAGATAGCTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAAGGTGACATGGTAGGAAATTCTCCTACTGCTTATAGATAGCTT  727

seq1  TAATTATTAAATGGGAAATAAATTGTGATCTTTTATATTTAAGATGTCCT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTAAATGGGAAATAAATTGTGATCTTTTATATTTAAGATGTCCT  777

seq1  CTTTCTGTTTGTGTTATCATAGGAGAAATACATAGATGCTGCTTCAGAGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTTTGTGTTATCATAGGAGAAATACATAGATGCTGCTTCAGAGT  827

seq1  TAATTGTATATACATACTTTTTTTCTGCCTCAGAAGATGTGGTTCCTGAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTATATACATACTTTTTTTCTGCCTCAGAAGATGTGGTTCCTGAG  877

seq1  GTAATATTTAATATTTGATTTAATGATAATAATTTATTCATAAGAATTAT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATATTTAATATTTGATTTAATGATAATAATTTATTCATAAGAATTAT  927

seq1  GATTTGATTTTACATGTCAGATTTATTCATAATGTTGTATGAAAAGAAAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGATTTTACATGTCAGATTTATTCATAATGTTGTATGAAAAGAAAA  977

seq1  TTTTTTACTATTGATGTCGGATTATTTAGGGACTTTTTTCTCTGAAAGAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTACTATTGATGTCGGATTATTTAGGGACTTTTTTCTCTGAAAGAA  1027

seq1  TACTAGTAAGCAGTGATATGCATCAAACCCCAAAAACACTTAAAAGTAGT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGTAAGCAGTGATATGCATCAAACCCCAAAAACACTTAAAAGTAGT  1077

seq1  AAGTTATGTATATGCTGCAAATACAGTCTTTTCCTGGTTTCTCACACCAA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATGTATATGCTGCAAATACAGTCTTTTCCTGGTTTCTCACACCAA  1127

seq1  CAGCAAATAAATAAATATTACAAAAACAGAATTC  1176
      ||||||||||||||||||||||||||||||||||
seq2  CAGCAAATAAATAAATATTACAAAAACAGAATTC  1161