BAC Information

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BAC

Clone NameB6Ng01-324K20
Chromosome18 (Build37)
Map Location 90,738,161 - 90,739,238
singlet/doubletsinglet
Overlap genenone
Upstream geneDok6, LOC383320, LOC620693, Eif3s6-ps2, LOC665526, Txndc10, LOC666779
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324K20.bB6Ng01-324K20.g
ACCGA112929GA112930
length1,2201,075
definitionB6Ng01-324K20.b B6Ng01-324K20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaataaccctgaaat
tccatctcataccagtcagaatggctaagaccaaaagttcaggtaacagt
agatgctggcgaggatgtggagaaagaggaacactcctctattgctggtg
gaatttcaagcttgtacaaccactctggaaatcagtctggccattcctca
gaaaattggacatagtactaccagaggttttcacaataccactcccaggc
atatatcgagaacatgttccaactggtaagaaagacacatgctccattat
gttcattacagccttatttataatagccagaagctggaaagaacccagat
gcccctcatcagaggaatgaatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttataaagttcctaggcaa
atggatggacctggatgatatcatcctgagtgaggtaacccaatcacaaa
agaactcacatgatatgtggtcactgataagtggatattagcccagaaac
ttagaatacccaagatacaagatacaagatacaagatacaagatacaaga
tacaagatacaagatacaaagcacatgaaactcataagaacaaagaccaa
agtgtggacactttgccccttcttagaattgggaacaaaacacccatgaa
aggagttacagagacaaagtttggagctgagacaaaaggatggaccatct
agggtctaccatatccggggatccatcccatagtcagccgccaaacactg
acaccattgcatacactagcaagcatttgctgaaaggaccctgatatagc
tgtctcttgtgagactacgctggggcctaacaaacacataagtggatgct
cacagtcagctattggatggatcacagggcccccaatggaggagtagata
agtaaccaagtagctaagggatctgcaaccttataggtggaacagcaata
tgactacagtaccccccggagctcttgttctctagctgcatattgtatca
gaagaatgctaattcggtcatccgtgaaagagaagccaatgctgttgcca
cctttattggcttcagtacagggttacgctaggctagagcttgggaatga
tagtgtgcgtgaagtaagga
gaattcacactcaggaaaggtaagaggccaagggcctctacctaggtcac
cacatggaccaacagaatgacagttttgcccataggccaccttagtccaa
gcagttcagactctcatagctaagcagacctgctcctcctgaactcatca
tggcatggcttgtggtctcccttaaagcttcctacaactgcatcagagga
gaatcctgtaatgaaattataagctactacccacccactgctcctgactg
ataggcctgcccagagtccctcattagttcagacaactcaactggacctt
aggacagtagcagctcttctactgggggaatcagagatcaaatgactcag
atacctgaggccttcccagttctacccttccaccctagggacagacagag
tcctagtctggaaaatttgtattttagtagaattttctagtcttccagag
cacttcctgttactctcccaaggcacagggtcttttgtgtgtgaattcca
ttacagactcaatatctagcacagccatctctatatcatagctgggaaat
cctgtagccaaacttcagtcaaatcaaatggtaacaacaatcaaagcaaa
aagtggctataaatttgaaagcaagaagtggtcaatgggaagttagtgaa
aaaaaaaaaaagaattgaaaaggaaaggacatggctgctcctaggtatgg
tggagtagaatgtttattatagataaaagggagagcatagccagggacag
ggacatccaggagagtccagagtgggcatgaccctgagccatgtaaggag
agagatgagaggagaggagagaaccagaccaagaggctaggatggtaagt
gacagataaaaaaagatcaggtaacccaaatgggttggattacagaagaa
gagcagctgggagaaggacagcccaacccctgggcttagagggtagggta
ttgcccaggcataccctgtaacagtaggactgagaatgctgggaaaccta
ataagacatctctgcttgatttgctaaataagcacctcagcttttgtctc
gagctttagactttatcgtagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_90738161_90739238
seq2: B6Ng01-324K20.g_66_1140 (reverse)

seq1  TCCCCTACTGTTAAGTCTAAAACTCTGGGACAAATAGCTGAGGTGCCTAT  50
      ||||||||  | ||||||||| ||| | |||||| ||||||||||| |||
seq2  TCCCCTACGATAAAGTCTAAAGCTC-GAGACAAA-AGCTGAGGTGCTTAT  48

seq1  TTAACAAATCAAAGCAGAGATGTC-TATTAGGTTTCCCCAGCATTCCTCA  99
      ||| |||||| ||||||||||||| |||||||||| ||||||||| ||||
seq2  TTAGCAAATC-AAGCAGAGATGTCTTATTAGGTTT-CCCAGCATT-CTCA  95

seq1  GTCCCTACCTGTTACAGGGTATGCCTGG--CATACCCTACCCTCT-AGCC  146
      || |||| ||||||||||||||||||||   |||||||||||||| ||||
seq2  GT-CCTA-CTGTTACAGGGTATGCCTGGGCAATACCCTACCCTCTAAGCC  143

seq1  CAGGGGTTGGGCTGTCCTTCTCCCAGCTGCTCTTCCTTCTGTAATCCAA-  195
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  CAGGGGTTGGGCTGTCCTTCTCCCAGCTGCTCTT-CTTCTGTAATCCAAC  192

seq1  CCATTTTGGTTACCTGATCTTTTTTTATCTGTCACTTACCATCCTAGCCT  245
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGGGTTACCTGATCTTTTTTTATCTGTCACTTACCATCCTAGCCT  242

seq1  CTTGGTCTGGTTCTCTCCTCTCCTCTCATCTCTCTCCTTACATGGCTCAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCTGGTTCTCTCCTCTCCTCTCATCTCTCTCCTTACATGGCTCAG  292

seq1  GGTCATGCCCACTCTGGACTCTCCTGGATGTCCCTGTCCCTGGCTATGCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGCCCACTCTGGACTCTCCTGGATGTCCCTGTCCCTGGCTATGCT  342

seq1  CTCCCTTTTATCTATAATAAACATTCTACTCCACCATACCTAGGAGCAGC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTTTATCTATAATAAACATTCTACTCCACCATACCTAGGAGCAGC  392

seq1  CATGTCCTTTCCTTTTCAATTCTTTTTTTTTTTTTCACTAACTTCCCATT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCCTTTCCTTTTCAATTCTTTTTTTTTTTTTCACTAACTTCCCATT  442

seq1  GACCACTTCTTGCTTTCAAATTTATAGCCACTTTTTGCTTTGATTGTTGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACTTCTTGCTTTCAAATTTATAGCCACTTTTTGCTTTGATTGTTGT  492

seq1  TACCATTTGATTTGACTGAAGTTTGGCTACAGGATTTCCCAGCTATGATA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTTGATTTGACTGAAGTTTGGCTACAGGATTTCCCAGCTATGATA  542

seq1  TAGAGATGGCTGTGCTAGATATTGAGTCTGTAATGGAATTCACACACAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATGGCTGTGCTAGATATTGAGTCTGTAATGGAATTCACACACAAA  592

seq1  AGACCCTGTGCCTTGGGAGAGTAACAGGAAGTGCTCTGGAAGACTAGAAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTGTGCCTTGGGAGAGTAACAGGAAGTGCTCTGGAAGACTAGAAA  642

seq1  ATTCTACTAAAATACAAATTTTCCAGACTAGGACTCTGTCTGTCCCTAGG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACTAAAATACAAATTTTCCAGACTAGGACTCTGTCTGTCCCTAGG  692

seq1  GTGGAAGGGTAGAACTGGGAAGGCCTCAGGTATCTGAGTCATTTGATCTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGGGTAGAACTGGGAAGGCCTCAGGTATCTGAGTCATTTGATCTC  742

seq1  TGATTCCCCCAGTAGAAGAGCTGCTACTGTCCTAAGGTCCAGTTGAGTTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCCCCAGTAGAAGAGCTGCTACTGTCCTAAGGTCCAGTTGAGTTG  792

seq1  TCTGAACTAATGAGGGACTCTGGGCAGGCCTATCAGTCAGGAGCAGTGGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACTAATGAGGGACTCTGGGCAGGCCTATCAGTCAGGAGCAGTGGG  842

seq1  TGGGTAGTAGCTTATAATTTCATTACAGGATTCTCCTCTGATGCAGTTGT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAGTAGCTTATAATTTCATTACAGGATTCTCCTCTGATGCAGTTGT  892

seq1  AGGAAGCTTTAAGGGAGACCACAAGCCATGCCATGATGAGTTCAGGAGGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCTTTAAGGGAGACCACAAGCCATGCCATGATGAGTTCAGGAGGA  942

seq1  GCAGGTCTGCTTAGCTATGAGAGTCTGAACTGCTTGGACTAAGGTGGCCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTCTGCTTAGCTATGAGAGTCTGAACTGCTTGGACTAAGGTGGCCT  992

seq1  ATGGGCAAAACTGTCATTCTGTTGGTCCATGTGGTGACCTAGGTAGAGGC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCAAAACTGTCATTCTGTTGGTCCATGTGGTGACCTAGGTAGAGGC  1042

seq1  CCTTGGCCTCTTACCTTTCCTGAGTGTGAATTC  1078
      |||||||||||||||||||||||||||||||||
seq2  CCTTGGCCTCTTACCTTTCCTGAGTGTGAATTC  1075