BAC Information

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BAC

Clone NameB6Ng01-325D04
Chromosome18 (Build37)
Map Location 27,241,576 - 27,360,297
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665977
Downstream geneEG665646, EG271505
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325D04.bB6Ng01-325D04.g
ACCGA113318GA113319
length4461,127
definitionB6Ng01-325D04.b B6Ng01-325D04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,359,846 - 27,360,297)(27,241,576 - 27,242,289)
sequence
actattacagcataaaggagcaatgagatgtaatctatttcaagatccta
acagagatatcaaatgctacacaaagaaccaaaacacacagaaactcctg
caagtatggaccacagccagcctgctcttttctgaggaagaaaggaaggg
aaatagatctggggggaaaggggagtaatggggagctggcagaggaagaa
cggtggtcaggatgtgttttgtgagagaagaatctattttctgaagaatc
ttacatctgtaaagcatctatgttcaccttggatccaaaactacaaaaga
ttcattgaacacactgtattctttataatctatttaaaacttcaaaaata
gtttcaatttataaaggttttacacatataaaacaaacaactgcttaggg
gaatcagcctaaatggagtagttgtgatgagagagagagagagaga

gaattctttgtttaggtatgtaccccatttttaatagggctagttaattc
tctggaggctatcttcttgagttcgttgtatatattggatattagccctc
tatcagatatgcaatttgtaaacgtcttttccatcctgtaggttgtcctt
ttgtccccttgacagcatcctttgcctttcttttcaattttatgagatcc
catttttctacagttaatcttagagcctgagccattggtgttctgttcca
gaaaatttcccctgtgccattgtgtttgaggctcttcaccactctctctt
ctattagattcagtgtatctggttttatgtggaggtccttgatccacttg
gacatgaggctttgtacaaggagataagaatggatcaatttgcattcaga
agtgcttactgataggacactggcatggctgtcccctgggaggctctgcc
aaagcctgacaaatacagatgtggatgctcgaaggaaaacactagactga
gcatgcagattccaatggagaagtcaggggaagaactgaagaagcttaaa
gagtttgcaacccatgggaataacaacattatcaaccaactagaacccct
cccagcccccccccccccgtgcagagataccagagactaaaccatcaacc
aaagtgtacatatggagggacccatagtttcagctacttttttagcagag
gattgccttatctggcaggaaacagaggggaggtccttggtaaggtggag
actcaattccccagcataggggtatgcaagggcagaggcaggagtggatt
ggtgggtgatggagttcccttatagaagcagtgtgggtgatggcataggg
ggtttgcaaagagaaaccaggaaatggggtaacatttgaaatgtaataaa
tagataaccaatagaaaaaaatagaaataaagtgaagtattttgaacaat
tgtattgtcaattcagtctaacatgataatagctaagagtgaatgtcata
atatggcattttcaaatattgtctttactttggtactttatccattttca
agatataaatagatgttctgatgtaccatctagagactgccatatctgga
atcattccataatcggcttccaatgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_27359846_27360297
seq2: B6Ng01-325D04.b_45_496 (reverse)

seq1  TCTCTCTCTCTCTCTCTCATCACAACTACTCCATTTAGGCTGATTCCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCATCACAACTACTCCATTTAGGCTGATTCCCCT  50

seq1  AAGCAGTTGTTTGTTTTATATGTGTAAAACCTTTATAAATTGAAACTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTTGTTTGTTTTATATGTGTAAAACCTTTATAAATTGAAACTATT  100

seq1  TTTGAAGTTTTAAATAGATTATAAAGAATACAGTGTGTTCAATGAATCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGTTTTAAATAGATTATAAAGAATACAGTGTGTTCAATGAATCTT  150

seq1  TTGTAGTTTTGGATCCAAGGTGAACATAGATGCTTTACAGATGTAAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGTTTTGGATCCAAGGTGAACATAGATGCTTTACAGATGTAAGATT  200

seq1  CTTCAGAAAATAGATTCTTCTCTCACAAAACACATCCTGACCACCGTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAAAATAGATTCTTCTCTCACAAAACACATCCTGACCACCGTTCT  250

seq1  TCCTCTGCCAGCTCCCCATTACTCCCCTTTCCCCCCAGATCTATTTCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGCCAGCTCCCCATTACTCCCCTTTCCCCCCAGATCTATTTCCCT  300

seq1  TCCTTTCTTCCTCAGAAAAGAGCAGGCTGGCTGTGGTCCATACTTGCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTTCCTCAGAAAAGAGCAGGCTGGCTGTGGTCCATACTTGCAGG  350

seq1  AGTTTCTGTGTGTTTTGGTTCTTTGTGTAGCATTTGATATCTCTGTTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTGTGTGTTTTGGTTCTTTGTGTAGCATTTGATATCTCTGTTAGG  400

seq1  ATCTTGAAATAGATTACATCTCATTGCTCCTTTATGCTGTAATAGTGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAAATAGATTACATCTCATTGCTCCTTTATGCTGTAATAGTGAAT  450

seq1  TC  452
      ||
seq2  TC  452


seq1: chr18_27241576_27242289
seq2: B6Ng01-325D04.g_491_1190

seq1  GCTGTCCCCTGGGAGGCTCTGCCAAAGCCTGACAAATACAGATGTGGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCCCTGGGAGGCTCTGCCAAAGCCTGACAAATACAGATGTGGATG  50

seq1  CTCGAAGGAAAACACTAGACTGAGCATGCAGATTCCAATGGAGAAGTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAAGGAAAACACTAGACTGAGCATGCAGATTCCAATGGAGAAGTCAG  100

seq1  GGGAAGAACTGAAGAAGCTTAAAGAGTTTGCAACCCATGGGAATAACAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAACTGAAGAAGCTTAAAGAGTTTGCAACCCATGGGAATAACAAC  150

seq1  ATTATCAACCAACTAGAACCCCTCCCAGCCCCCCCCCCCCCGTGCAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCAACCAACTAGAACCCCTCCCAGCCCCCCCCCCCCCGTGCAGAGA  200

seq1  TACCAGAGACTAAACCATCAACCAAAGTGTACATATGGAGGGACCCATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGAGACTAAACCATCAACCAAAGTGTACATATGGAGGGACCCATAG  250

seq1  TTTCAGCTACTTTTTTAGCAGAGGATTGCCTTATCTGGCAGGAAACAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCTACTTTTTTAGCAGAGGATTGCCTTATCTGGCAGGAAACAGAG  300

seq1  GGGAGGTCCTTGGTAAGGTGGAGACTCAATTCCCCAGCATAGGGGTATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGTCCTTGGTAAGGTGGAGACTCAATTCCCCAGCATAGGGGTATGC  350

seq1  AAGGGCAGAGGCAGGAGTGGATTGGTGGGTGATGGAGTTCCCTTATAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCAGAGGCAGGAGTGGATTGGTGGGTGATGGAGTTCCCTTATAGAA  400

seq1  GCAGGTGTGGGTGATGGCATAGGGGGTTTGCAAAGAGAAAACCAGGAAAT  450
      ||| ||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GCA-GTGTGGGTGATGGCATAGGGGGTTTGCAAAGAG-AAACCAGGAAAT  448

seq1  GGGGTAACATTTGAAATGTAAATAAATAAGATAACCAATAGAAAAAAAAT  500
      ||||||||||||||||||| ||||||| ||||||||||||| ||||||||
seq2  GGGGTAACATTTGAAATGT-AATAAAT-AGATAACCAATAG-AAAAAAAT  495

seq1  AGAAATAAAGTGGAAGTATTTTGAACAAATGTATTGTAAATTCAGTCTAA  550
      ||||||||||| |||||||||||||||| |||||||| ||||||||||||
seq2  AGAAATAAAGT-GAAGTATTTTGAACAATTGTATTGTCAATTCAGTCTAA  544

seq1  CATGATAATAGCTAAGAGTGAAATGTCAATAAATAT-GCATTTTCAAATA  599
      |||||||||||||||||||| |||||||   ||||| |||||||||||||
seq2  CATGATAATAGCTAAGAGTG-AATGTCA--TAATATGGCATTTTCAAATA  591

seq1  TGTCCTTTAATTTGGTACTTTAT-CATTTTCAAAAATAATAAATAGAATG  648
      |   ||||| ||||||||||||| ||||||||| |   |||||||| |||
seq2  TTGTCTTTACTTTGGTACTTTATCCATTTTCAAGA--TATAAATAG-ATG  638

seq1  TTTCTGATGGACCATCTAGAGACTGCCATATCTGGGGATCCATCCCATAA  698
       |||||||| |||||||||||||||||||||||  |||  ||| ||||||
seq2  -TTCTGATGTACCATCTAGAGACTGCCATATCT--GGAATCATTCCATAA  685

seq1  TCAGCTTCCAAATGCT  714
      || |||||| ||||||
seq2  TCGGCTTCC-AATGCT  700


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