BAC Information

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BAC

Clone NameB6Ng01-328D08
Chromosome18 (Build37)
Map Location 58,813,151 - 58,929,633
singlet/doubletdoublet
Overlap geneIsoc1
Upstream gene1700011I03Rik, Slc12a2, 9330166H04Rik, Fbn2, Slc27a6
Downstream geneAdamts19, A730017C20Rik, 4833446K15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328D08.bB6Ng01-328D08.g
ACCGA115535GA115536
length1,1761,197
definitionB6Ng01-328D08.b B6Ng01-328D08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,928,450 - 58,929,633)(58,813,151 - 58,814,353)
sequence
gaattcaccataaacacaaagaaaaacacttctgtgagagactgatgctg
agtgtgtcgaaacaagaagtgagaaggagctggggaagccccacctgctg
tggttcaaatcttgcagaagactggcactgtcaggagctggggcatgata
gatgctgatggggattacctatggctgttccctctggctttctctttata
gtagttatgtcttaattaaacccaaatggaaggaaaagaggaaaaatgcc
tctttaactcaatttttaaaggtgaattcagagaaaaaaatcattattta
gctcatactcattcaactttaagaactcaatcaagtcatacagaccctaa
gagaacacaaatgccagcccaggctacaatacccagcaaaactctcaatc
accatagatggagaaaacacgatatcccatgacaaaaccaaatttacaca
atatctttccacaaatccagccctacaaaggataatagatggaaaacacc
aacacaaggagtgagactacaccctaggagaagcaagaaagtaatctttc
aacaaacccacaaaaacataattccatatttaacaagaaaattaacagga
agtaacaataacttttccttaatgtctcttagtatgaaaattaatattac
caacatattctagtcaattgaaattcaaaaatatgaggaattagaaattt
attggctgtcatcccatggtctctctaatttggtaatgggaggaataggt
ccaatatggtacaatccatatatactttctgcttgtttgtacatgacagg
gtcttgctgtgtgccacataatggtcttgaaatcatgcttctcctatctc
agactctctattagtaggattgtttatttgatgtttttacattatactat
ggctttcagaacagcttacacatttcaaaattatttatgcagcccaaaga
agtgtggacaattaacttgggaggtggcttgtaagagaacaacaaagagt
gagattgaaggctttgcttgatatttataattattgtatcatttggagaa
aaggactttataagtactcttattctgagatgatgcttgcaaaatatcac
agcatgaacagatcttaatactcactaacgtctgttgtgccacccctctt
agcgaacaatggttcattgaaacagt

gaattctctgatagcaccaagattgttcctgtcaacttctcaggaaggga
gacatggatactgagtgctgggctaacttcaaaggttctgccaatcccct
gtcaaagagttccaatcacaaatggcatttgccgcaggtggcacgcccac
ttacacttgagcaacagtacagtgactaagaattgcacacaagtaacggc
tgaagtagcaaaaggaaggcagaataatgattgagtagaggtgtagccaa
gcttcctgaagctgggcaatttcaagatcttaagacaaattttgtagaca
ataggattttccagtttaggaaagagtttataagttggatttcatttttt
tttcttcccattccaggagtctatttattgaaaaatgaaccagactccac
actagacagaaacatcctgatgcaatacatagaaatgccaaaattcaaaa
cgtaataaattataaacactttctgtcctcaaaggatgatcgtggagaag
tgaatgtactaaaatagaaatgtgtctctgaaagcaaattctttgaaaag
aaaatatgacagctaggaatagcagagcaggtcagaattacggctgcctt
agacgcagtgacagatgagtatactacacagagacaaaagaacaggagag
atttaaaaagagtatatgggaatgtgtcacagaaagatatgaacacttaa
tcaactcctttattttctgatcttaaaccagtcacctgcttgtatcttta
tgcacataaattaattgcttttcttccactgtgataaagtagctctgaga
gattactcacttgcagacctcctctggagactagctagctcctcccccag
tgctgtacccaatgaacacaacacggaggttctaggctgcatttatagac
accatcttattctagcttcactgaacagtgcctgtgtgtctgtcccttct
cattccttctctgcccttagccagggtttcagatccaaaagtagcagagt
ctgcacatattgtttgatcttttaactgtttaatgactgtgaaatagaac
actgtgtacatttttatttgtgccttctgacttcctcgatgcacacactt
gttgtgcttcttgggcatatcgtcctcggtccaggtatcttcatcctctt
cacaggaatccattgtccttaactgctgcatgccagagagttagcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_58928450_58929633
seq2: B6Ng01-328D08.b_45_1220 (reverse)

seq1  ACTGTTTCAATGAACAATGGTTCTGCTTAGA-GGGTGGCAC-ACAGACGT  48
      ||||||||||||||| || |||| ||| ||| ||||||||| ||||||||
seq2  ACTGTTTCAATGAACCATTGTTC-GCTAAGAGGGGTGGCACAACAGACGT  49

seq1  TAGGTGAGTA-TAAGATTCTGGTTCATTGGCTGTGATAATTTTGCAAAGC  97
      || ||||||| ||||| ||| ||||||  |||||||| ||||||| ||||
seq2  TA-GTGAGTATTAAGA-TCT-GTTCAT--GCTGTGAT-ATTTTGC-AAGC  92

seq1  ATTCATCTCAGAATAAGAGTAACTTATAAAGTCCTTTTCTCCAAATTGAT  147
      | |||||||||||||||||| |||||||||||||||||||||||| ||||
seq2  A-TCATCTCAGAATAAGAGT-ACTTATAAAGTCCTTTTCTCCAAA-TGAT  139

seq1  ACAATAATTATAAATATCAAGCAAAGCCTTCAATCTCACTCTTTGTTGTT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAATTATAAATATCAAGCAAAGCCTTCAATCTCACTCTTTGTTGTT  189

seq1  CTCTTACAAGCCACCTCCCAAGTTAATTGTCCACACTTCTTTTGGCTGCA  247
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTCTTACAAGCCACCTCCCAAGTTAATTGTCCACACTTCTTTGGGCTGCA  239

seq1  TAAATAATTTTGAAATGTGTAAGCTGTTCTGAAAGCCATAGTATAATGTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATTTTGAAATGTGTAAGCTGTTCTGAAAGCCATAGTATAATGTA  289

seq1  AAAACATCAAATAAACAATCCTACTAATAGAGAGTCTGAGATAGGAGAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATCAAATAAACAATCCTACTAATAGAGAGTCTGAGATAGGAGAAG  339

seq1  CATGATTTCAAGACCATTATGTGGCACACAGCAAGACCCTGTCATGTACA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTTCAAGACCATTATGTGGCACACAGCAAGACCCTGTCATGTACA  389

seq1  AACAAGCAGAAAGTATATATGGATTGTACCATATTGGACCTATTCCTCCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCAGAAAGTATATATGGATTGTACCATATTGGACCTATTCCTCCC  439

seq1  ATTACCAAATTAGAGAGACCATGGGATGACAGCCAATAAATTTCTAATTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCAAATTAGAGAGACCATGGGATGACAGCCAATAAATTTCTAATTC  489

seq1  CTCATATTTTTGAATTTCAATTGACTAGAATATGTTGGTAATATTAATTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATTTTTGAATTTCAATTGACTAGAATATGTTGGTAATATTAATTT  539

seq1  TCATACTAAGAGACATTAAGGAAAAGTTATTGTTACTTCCTGTTAATTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTAAGAGACATTAAGGAAAAGTTATTGTTACTTCCTGTTAATTTT  589

seq1  CTTGTTAAATATGGAATTATGTTTTTGTGGGTTTGTTGAAAGATTACTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTAAATATGGAATTATGTTTTTGTGGGTTTGTTGAAAGATTACTTT  639

seq1  CTTGCTTCTCCTAGGGTGTAGTCTCACTCCTTGTGTTGGTGTTTTCCATC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTCTCCTAGGGTGTAGTCTCACTCCTTGTGTTGGTGTTTTCCATC  689

seq1  TATTATCCTTTGTAGGGCTGGATTTGTGGAAAGATATTGTGTAAATTTGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCCTTTGTAGGGCTGGATTTGTGGAAAGATATTGTGTAAATTTGG  739

seq1  TTTTGTCATGGGATATCGTGTTTTCTCCATCTATGGTGATTGAGAGTTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCATGGGATATCGTGTTTTCTCCATCTATGGTGATTGAGAGTTTT  789

seq1  GCTGGGTATTGTAGCCTGGGCTGGCATTTGTGTTCTCTTAGGGTCTGTAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTATTGTAGCCTGGGCTGGCATTTGTGTTCTCTTAGGGTCTGTAT  839

seq1  GACTTGATTGAGTTCTTAAAGTTGAATGAGTATGAGCTAAATAATGATTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGATTGAGTTCTTAAAGTTGAATGAGTATGAGCTAAATAATGATTT  889

seq1  TTTTCTCTGAATTCACCTTTAAAAATTGAGTTAAAGAGGCATTTTTCCTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTGAATTCACCTTTAAAAATTGAGTTAAAGAGGCATTTTTCCTC  939

seq1  TTTTCCTTCCATTTGGGTTTAATTAAGACATAACTACTATAAAGAGAAAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTCCATTTGGGTTTAATTAAGACATAACTACTATAAAGAGAAAG  989

seq1  CCAGAGGGAACAGCCATAGGTAATCCCCATCAGCATCTATCATGCCCCAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGGAACAGCCATAGGTAATCCCCATCAGCATCTATCATGCCCCAG  1039

seq1  CTCCTGACAGTGCCAGTCTTCTGCAAGATTTGAACCACAGCAGGTGGGGC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGACAGTGCCAGTCTTCTGCAAGATTTGAACCACAGCAGGTGGGGC  1089

seq1  TTCCCCAGCTCCTTCTCACTTCTTGTTTCGACACACTCAGCATCAGTCTC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGCTCCTTCTCACTTCTTGTTTCGACACACTCAGCATCAGTCTC  1139

seq1  TCACAGAAGTGTTTTTCTTTGTGTTTATGGTGAATTC  1184
      |||||||||||||||||||||||||||||||||||||
seq2  TCACAGAAGTGTTTTTCTTTGTGTTTATGGTGAATTC  1176


seq1: chr18_58813151_58814353
seq2: B6Ng01-328D08.g_68_1264

seq1  GAATTCTCTGATAGCACCAAGATTGTTCCTGTCAACTTCTCAGGAAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGATAGCACCAAGATTGTTCCTGTCAACTTCTCAGGAAGGGA  50

seq1  GACATGGATACTGAGTGCTGGGCTAACTTCAAAGGTTCTGCCAATCCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGATACTGAGTGCTGGGCTAACTTCAAAGGTTCTGCCAATCCCCT  100

seq1  GTCAAAGAGTTCCAATCACAAATGGCATTTGCCGCAGGTGGCACGCCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGAGTTCCAATCACAAATGGCATTTGCCGCAGGTGGCACGCCCAC  150

seq1  TTACACTTGAGCAACAGTACAGTGACTAAGAATTGCACACAAGTAACGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACTTGAGCAACAGTACAGTGACTAAGAATTGCACACAAGTAACGGC  200

seq1  TGAAGTAGCAAAAGGAAGGCAGAATAATGATTGAGTAGAGGTGTAGCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTAGCAAAAGGAAGGCAGAATAATGATTGAGTAGAGGTGTAGCCAA  250

seq1  GCTTCCTGAAGCTGGGCAATTTCAAGATCTTAAGACAAATTTTGTAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTGAAGCTGGGCAATTTCAAGATCTTAAGACAAATTTTGTAGACA  300

seq1  ATAGGATTTTCCAGTTTAGGAAAGAGTTTATAAGTTGGATTTCATTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGATTTTCCAGTTTAGGAAAGAGTTTATAAGTTGGATTTCATTTTTT  350

seq1  TTTCTTCCCATTCCAGGAGTCTATTTATTGAAAAATGAACCAGACTCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCCATTCCAGGAGTCTATTTATTGAAAAATGAACCAGACTCCAC  400

seq1  ACTAGACAGAAACATCCTGATGCAATACATAGAAATGCCAAAATTCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGACAGAAACATCCTGATGCAATACATAGAAATGCCAAAATTCAAAA  450

seq1  CGTAATAAATTATAAACACTTTCTGTCCTCAAAGGATGATCGTGGAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAATAAATTATAAACACTTTCTGTCCTCAAAGGATGATCGTGGAGAAG  500

seq1  TGAATGTACTAAAATAGAAATGTGTCTCTGAAAGCAAATTCTTTGAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTACTAAAATAGAAATGTGTCTCTGAAAGCAAATTCTTTGAAAAG  550

seq1  AAAATATGACAGCTAGGAATAGCAGAGCAGGTCAGAATTACGGCTGCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGACAGCTAGGAATAGCAGAGCAGGTCAGAATTACGGCTGCCTT  600

seq1  AGACGCAGTGACAGATGAGTATACTACACAGAGACAAAAGAACAGGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGCAGTGACAGATGAGTATACTACACAGAGACAAAAGAACAGGAGAG  650

seq1  ATTTAAAAAGAGTATATGGGAATGTGTCACAGAAAGATATGAACACTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAAAGAGTATATGGGAATGTGTCACAGAAAGATATGAACACTTAA  700

seq1  TCAACTCCTTTATTTTCTGATCTTAAACCAGTCACCTGCTTGTATCTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTCCTTTATTTTCTGATCTTAAACCAGTCACCTGCTTGTATCTTTA  750

seq1  TGCACATAAATTAATTGCTTTTCTTCCACTGTGATAAAGTAGCTCTGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATAAATTAATTGCTTTTCTTCCACTGTGATAAAGTAGCTCTGAGA  800

seq1  GATTACTCACTTGCAGACCTCCTCTGGAGACTAGCTAGCTCCTCCCCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACTCACTTGCAGACCTCCTCTGGAGACTAGCTAGCTCCTCCCCCAG  850

seq1  TGCTGTACCCAATGAACACAAACACGGAGGTTCTAGGCTGCATTTATAGA  900
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGCTGTACCCAATGAACAC-AACACGGAGGTTCTAGGCTGCATTTATAGA  899

seq1  CACCATCTTATTCTAGCTTCACTGAACAGTGCCTGTGTGTCTGTCCCTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCTTATTCTAGCTTCACTGAACAGTGCCTGTGTGTCTGTCCCTTC  949

seq1  TCATTCCTTCTCTGCCCTTAGCCAGGGTTTCAGGATCCAAAAGTAGCAGG  1000
      |||||||||||||||||||||||||||||||| ||||||||||||||| |
seq2  TCATTCCTTCTCTGCCCTTAGCCAGGGTTTCA-GATCCAAAAGTAGCA-G  997

seq1  AGTCTGCACATATTGTTTGATCTTTTAACTGGTTTAATGACTGTGAAATA  1050
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGTCTGCACATATTGTTTGATCTTTTAACT-GTTTAATGACTGTGAAATA  1046

seq1  GAACACTGTGTACA-TTTTATTTGTGCCTTCCTGACTT-CTCGATGCACA  1098
      |||||||||||||| ||||||||||||||| ||||||| |||||||||||
seq2  GAACACTGTGTACATTTTTATTTGTGCCTT-CTGACTTCCTCGATGCACA  1095

seq1  CACTTG-TGTGCTTCTTGGGCATTTATCTTTCTTCTGTCAAGTAATCTTT  1147
      |||||| |||||||||||||||  ||||  || || ||| ||  ||| ||
seq2  CACTTGTTGTGCTTCTTGGGCA--TATC-GTCCTCGGTCCAGGTATC-TT  1141

seq1  CATCCTCTTTCAACAGTATCCATTGTCTCTTACTGCTGCATTGCAG-GAG  1196
      ||||||| ||||   | ||||||||||  | ||||||||||  ||| |||
seq2  CATCCTC-TTCACAGGAATCCATTGTCCTTAACTGCTGCATGCCAGAGAG  1190

seq1  TTAGCCA  1203
      |||||||
seq2  TTAGCCA  1197


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