BAC Information

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BAC

Clone NameB6Ng01-329F04
Chromosome18 (Build37)
Map Location 63,898,344 - 64,005,510
singlet/doubletdoublet
Overlap geneWdr7
Upstream gene2700046A07Rik, Apcdd1, Napg, 9430028L06Rik, 9030411M15Rik, LOC627792, Txnl1
Downstream geneLOC629436, LOC667773, St8sia3, LOC433193, Onecut2, LOC667783, LOC100043304, Fech, Nars, Atp8b1, LOC629480
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329F04.bB6Ng01-329F04.g
ACCGA116317GA116318
length1,1661,085
definitionB6Ng01-329F04.b B6Ng01-329F04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,004,332 - 64,005,510)(63,898,344 - 63,899,434)
sequence
gaattccaggacagtcagggcaaataagcaaaccaacaacaacaaaaaag
tgagtttttaaaaaaaattaaaacaagccaggcagtggtagctcacactt
taatcgcagcacttgggaggcagaggcaggcagatttctaagttcgagac
cagcctggtctacagagtgagttccaagacagccagggctacacaagaaa
ccctgtcttgaaaacacacacacacaaaaagaaaataattaaaacaagac
tacataattcattgtttaagcatacttatgtatgaggactagagacagaa
aaggcagctatgatctgattaaaatggatgtttttctgtgaaaatgactg
tcaaaacatcaaccaaaactatagcctagatagacttcagtgtctatgaa
aatgggtctacttgtttagattttctcaaataagccaggttgtgtgtcat
cccgtgaaactgagggatcacgtaggcataggcattcaaggcaaatatag
gtggtatttccagatccactgtactacaaagggcagagcggcgagaggag
agaaaagtgaaacgctccctaaacaagaagaaaatgtactatctacctga
agttatttgcatgaataattgacaaggagaaaaagaaacctatgtggtat
tatgttatggcttaaaatatgttaaacttcaatgccgtgtcaaggaacca
taattggtgactattaaagttgttggagaacgactccaaagaatcatcat
taaggattccctctccagaaaactgaccagtcatctgacatgtttgcata
ccatcaccaggagttctggtatatttgagtctaaagttcaggactcttta
attaattaaatattaaattcctttatcagatacatgtttaaagtcgatgg
gccaggagctctggttaagacacagggatgtctggggctccagagctgcc
gtagcagtaagagcccattgggccctcgcagaggacctggtttgactcta
agcactcatatcagacagatcataccgcccatactcagctccaggaaaat
ccgacacatctggatctgacactctgcctccacagcatggatactcatgt
gcgcatgccctgtatgcaatatacacaacatatagtgacctatatcctga
aaggaaaatagaggtc

gaattccaaatacagctgaaggcacttgaatttttttcccctttttttgg
cagttggtaatttgtcctcctgttactcggtttttctacggatgcaagga
atatttgcataagctactaattcagggcgattcttctggaaggttaaata
tctggaacatagcagacatagcagagaaacaggaagccgatgaaggtaat
agtgaatctgcacattgacttcataattcttttactctaacattttgtgt
tataacagaattgaacatatttacgtattgctttctcctaagtatttatt
atattttatgaaagtaaacatttggtacattactgaatcaatcaacatta
tttaatgttattactattttttaaacataaatgtatttattttatatgac
accaaacctctacagggctaaagatgacaacttgtattagcttgcaagag
gcatttgacaagctgaagccttgccctgctggaattatcgatcagctaag
tgtgattcccaacagcaacgaacctcttaaagtaactgcgagtgtctaca
taccagcacacgggcgacttgtttgtggccgggaagatggaagcatcatt
attgtgcctgccacccagacggccatagttcagctattgcaaggagaaca
catgctcagaagaggtaccctgaaggtctacctatgtgcaccgtgttctg
agaactctgtaaccctgatgcggggaatttctctatgccataatttaaga
aataagaccagttggtatattgctaatgtggttggtagtgtacattcaat
tacattttaaatatctgttattgcgataaatactatgaatggctctaaat
aagaaagtattgtttttaatctccttcgcacatattattagtttcacaaa
ttattagttgaattgattagtatatagctatattgtcagcaatattgata
ctcttctaaacagcgctgttgactaatgtaatgttagtagtaatttttat
agtaagtaaataatgggaaattgctacatgtatatgctcaacatagcaca
ttatttttcatttctatttgtaatatattatggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_64004332_64005510
seq2: B6Ng01-329F04.b_44_1209 (reverse)

seq1  GACCTCTATTTTCCTTTTTAAAGATTTATTAGTTTTAATTATATGTTTGT  50
      ||||||||||||||  ||| | ||| ||       | | |||||| ||||
seq2  GACCTCTATTTTCC--TTTCAGGATATA-----GGTCACTATATG-TTGT  42

seq1  GTATATTTGCATACA-GGCATGCGCACATGAGTATTCATGCCTGTGGAGG  99
      ||||| ||||||||| ||||||||||||||||||| |||| |||||||||
seq2  GTATA-TTGCATACAGGGCATGCGCACATGAGTATCCATG-CTGTGGAGG  90

seq1  CAGGAGGTGTCAGATCCAGATGTGTCGGA-TTTCCTGGAGCTGGAGTATG  148
      |||   ||||||||||||||||||||||| |||||||||||| |||||||
seq2  CAG--AGTGTCAGATCCAGATGTGTCGGATTTTCCTGGAGCT-GAGTATG  137

seq1  GGCGGTTATGATCTGTCTGATATGAGTGCTTAGAGTCAAACCCAGGTCCT  198
      ||||| |||||||||||||||||||||||||||||||||| |||||||||
seq2  GGCGG-TATGATCTGTCTGATATGAGTGCTTAGAGTCAAA-CCAGGTCCT  185

seq1  CTGCGAGGGCCCAATGGGCTCTTACTGCTACGGCAGCTCTGGAGCCCCAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGAGGGCCCAATGGGCTCTTACTGCTACGGCAGCTCTGGAGCCCCAG  235

seq1  ACATCCCTGTGTCTTAACCAGAGCTCCTGGCCCATCGACTTTAAACATGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCTGTGTCTTAACCAGAGCTCCTGGCCCATCGACTTTAAACATGT  285

seq1  ATCTGATAAAGGAATTTAATATTTAATTAATTAAAGAGTCCTGAACTTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATAAAGGAATTTAATATTTAATTAATTAAAGAGTCCTGAACTTTA  335

seq1  GACTCAAATATACCAGAACTCCTGGTGATGGTATGCAAACATGTCAGATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAAATATACCAGAACTCCTGGTGATGGTATGCAAACATGTCAGATG  385

seq1  ACTGGTCAGTTTTCTGGAGAGGGAATCCTTAATGATGATTCTTTGGAGTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTCAGTTTTCTGGAGAGGGAATCCTTAATGATGATTCTTTGGAGTC  435

seq1  GTTCTCCAACAACTTTAATAGTCACCAATTATGGTTCCTTGACACGGCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCAACAACTTTAATAGTCACCAATTATGGTTCCTTGACACGGCAT  485

seq1  TGAAGTTTAACATATTTTAAGCCATAACATAATACCACATAGGTTTCTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTTAACATATTTTAAGCCATAACATAATACCACATAGGTTTCTTT  535

seq1  TTCTCCTTGTCAATTATTCATGCAAATAACTTCAGGTAGATAGTACATTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTGTCAATTATTCATGCAAATAACTTCAGGTAGATAGTACATTT  585

seq1  TCTTCTTGTTTAGGGAGCGTTTCACTTTTCTCTCCTCTCGCCGCTCTGCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTGTTTAGGGAGCGTTTCACTTTTCTCTCCTCTCGCCGCTCTGCC  635

seq1  CTTTGTAGTACAGTGGATCTGGAAATACCACCTATATTTGCCTTGAATGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAGTACAGTGGATCTGGAAATACCACCTATATTTGCCTTGAATGC  685

seq1  CTATGCCTACGTGATCCCTCAGTTTCACGGGATGACACACAACCTGGCTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCTACGTGATCCCTCAGTTTCACGGGATGACACACAACCTGGCTT  735

seq1  ATTTGAGAAAATCTAAACAAGTAGACCCATTTTCATAGACACTGAAGTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGAAAATCTAAACAAGTAGACCCATTTTCATAGACACTGAAGTCT  785

seq1  ATCTAGGCTATAGTTTTGGTTGATGTTTTGACAGTCATTTTCACAGAAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGCTATAGTTTTGGTTGATGTTTTGACAGTCATTTTCACAGAAAA  835

seq1  ACATCCATTTTAATCAGATCATAGCTGCCTTTTCTGTCTCTAGTCCTCAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCATTTTAATCAGATCATAGCTGCCTTTTCTGTCTCTAGTCCTCAT  885

seq1  ACATAAGTATGCTTAAACAATGAATTATGTAGTCTTGTTTTAATTATTTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGTATGCTTAAACAATGAATTATGTAGTCTTGTTTTAATTATTTT  935

seq1  CTTTTTGTGTGTGTGTGTTTTCAAGACAGGGTTTCTTGTGTAGCCCTGGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTGTGTGTGTGTTTTCAAGACAGGGTTTCTTGTGTAGCCCTGGC  985

seq1  TGTCTTGGAACTCACTCTGTAGACCAGGCTGGTCTCGAACTTAGAAATCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGGAACTCACTCTGTAGACCAGGCTGGTCTCGAACTTAGAAATCT  1035

seq1  GCCTGCCTCTGCCTCCCAAGTGCTGCGATTAAAGTGTGAGCTACCACTGC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTCTGCCTCCCAAGTGCTGCGATTAAAGTGTGAGCTACCACTGC  1085

seq1  CTGGCTTGTTTTAATTTTTTTTAAAAACTCACTTTTTTGTTGTTGTTGGT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTGTTTTAATTTTTTTTAAAAACTCACTTTTTTGTTGTTGTTGGT  1135

seq1  TTGCTTATTTGCCCTGACTGTCCTGGAATTC  1179
      |||||||||||||||||||||||||||||||
seq2  TTGCTTATTTGCCCTGACTGTCCTGGAATTC  1166


seq1: chr18_63898344_63899434
seq2: B6Ng01-329F04.g_63_1147

seq1  GAATTCCAAATACAGCTGAAGGCACTTGAATTTTTTTCCCCTTTTTTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATACAGCTGAAGGCACTTGAATTTTTTTCCCCTTTTTTTGG  50

seq1  CAGTTGGTAATTTGTCCTCCTGTTACTCGGTTTTTCTACGGATGCAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGGTAATTTGTCCTCCTGTTACTCGGTTTTTCTACGGATGCAAGGA  100

seq1  ATATTTGCATAAGCTACTAATTCAGGGCGATTCTTCTGGAAGGTTAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGCATAAGCTACTAATTCAGGGCGATTCTTCTGGAAGGTTAAATA  150

seq1  TCTGGAACATAGCAGACATAGCAGAGAAACAGGAAGCCGATGAAGGTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAACATAGCAGACATAGCAGAGAAACAGGAAGCCGATGAAGGTAAT  200

seq1  AGTGAATCTGCACATTGACTTCATAATTCTTTTACTCTAACATTTTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATCTGCACATTGACTTCATAATTCTTTTACTCTAACATTTTGTGT  250

seq1  TATAACAGAATTGAACATATTTACGTATTGCTTTCTCCTAAGTATTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACAGAATTGAACATATTTACGTATTGCTTTCTCCTAAGTATTTATT  300

seq1  ATATTTTATGAAAGTAAACATTTGGTACATTACTGAATCAATCAACATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATGAAAGTAAACATTTGGTACATTACTGAATCAATCAACATTA  350

seq1  TTTAATGTTATTACTATTTTTTAAACATAAATGTATTTATTTTATATGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTTATTACTATTTTTTAAACATAAATGTATTTATTTTATATGAC  400

seq1  ACCAAACCTCTACAGGGCTAAAGATGACAACTTGTATTAGCTTGCAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACCTCTACAGGGCTAAAGATGACAACTTGTATTAGCTTGCAAGAG  450

seq1  GCATTTGACAAGCTGAAGCCTTGCCCTGCTGGAATTATCGATCAGCTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGACAAGCTGAAGCCTTGCCCTGCTGGAATTATCGATCAGCTAAG  500

seq1  TGTGATTCCCAACAGCAACGAACCTCTTAAAGTAACTGCGAGTGTCTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTCCCAACAGCAACGAACCTCTTAAAGTAACTGCGAGTGTCTACA  550

seq1  TACCAGCACACGGGCGACTTGTTTGTGGCCGGGAAGATGGAAGCATCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGCACACGGGCGACTTGTTTGTGGCCGGGAAGATGGAAGCATCATT  600

seq1  ATTGTGCCTGCCACCCAGACGGCCATAGTTCAGCTATTGCAAGGAGAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGCCTGCCACCCAGACGGCCATAGTTCAGCTATTGCAAGGAGAACA  650

seq1  CATGCTCAGAAGAGGTACCCTGAAGGTCTACCTATGTGCACCGTGTTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCAGAAGAGGTACCCTGAAGGTCTACCTATGTGCACCGTGTTCTG  700

seq1  AGAACTCTGTAACCCTGATGCGGGGAATTTCTCTATGCCATAATTTAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCTGTAACCCTGATGCGGGGAATTTCTCTATGCCATAATTTAAGA  750

seq1  AATAAGACCAGTTGGTATATTGCTAATGTGGTTGGTAGTGTACATTCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGACCAGTTGGTATATTGCTAATGTGGTTGGTAGTGTACATTCAAT  800

seq1  TACATTTTAAATATCTGTTATTGCGATAAATACTATGAATGGCTCTAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTAAATATCTGTTATTGCGATAAATACTATGAATGGCTCTAAAT  850

seq1  AAGAAAGTATTGTTTTTAATCTCCTTCGCACATATTATTAGTTTCACAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGTATTGTTTTTAATCTCCTTCGCACATATTATTAGTTTCACAAA  900

seq1  TTATTAGTTGAATTGATTAGTATATAGCTATATTGTCAGCAATATTGATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGTTGAATTGATTAGTATATAGCTATATTGTCAGCAATATTGATA  950

seq1  CTCTTCTAAAACAGCGCTGTTGAACTAATGTAATTGTTTAGTAGTAATTT  1000
      ||||||| |||||||||||||| |||||||||||   |||||||||||||
seq2  CTCTTCT-AAACAGCGCTGTTG-ACTAATGTAAT--GTTAGTAGTAATTT  996

seq1  TTATAGTAAAGTAAATAATGGGAAATTGCTACATGTTATATGCTCAACAT  1050
      ||||||| ||||||||||||||||||||||||||| ||||||||||||||
seq2  TTATAGT-AAGTAAATAATGGGAAATTGCTACATG-TATATGCTCAACAT  1044

seq1  AGCAACATTA-TTTTCATTTCTATTTGTTAATATA-TATGGGA  1091
      ||| |||||| |||||||||||||||| ||||||| |||||||
seq2  AGC-ACATTATTTTTCATTTCTATTTG-TAATATATTATGGGA  1085


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