BAC Information

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BAC

Clone NameB6Ng01-331P11
Chromosome18 (Build37)
Map Location 85,596,407 - 85,597,522
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp407, Cndp1, EG640234, Cndp2, LOC100039711, LOC100039725, B230399E16Rik, Cyb5, Fbxo15, 1700034H14Rik, LOC100039765
Downstream geneLOC665382, LOC545269, LOC545270, LOC665402, Neto1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331P11.bB6Ng01-331P11.g
ACCGA118200GA118201
length9461,108
definitionB6Ng01-331P11.b B6Ng01-331P11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagttctataccccatttttttgattgggttgtttagt
tttctggtgattaactttttgagtcctttatatattttggatattagcct
ccaattgaatgtggggctagtgaggattttttgtcccaatcagtaggttg
ctgatttgtcttattgactatgttctttgccttacagaagctttccagtt
tcataaggttccatttatcaattcttttttttctttttttattattaaat
taatttattttttatactccatattccattccttacccccatccaccctc
cgaatgctccacatcccatacctcctccacctccccatctttacatggat
gccccccctacctcacctcctgttctgacctctaaattccctggagcctc
cagtctcttgagggttaggtgcatcatctctgaatgaacacagacctgga
agtcctctactctgtatgtgtggggagcctcatattagctggtgtatgct
gtccgtttggtggtccagtgtttgagagatctaggaggtccagattaatt
gaggctgctggccctcctacaggatcgcccttctcctcagcttctttcag
ccttccctaattcaaaagcaggggtcaactgtttctgtccattggttggg
tgcaaatatctgcatctgactctttcagctgtttgttggatcttttggaa
ggcagtcatgctaggcctctttttgtaagtgctccataggctcagtaata
gtgtcaggccttaggatctcccctttgacctggatcccactttggggcct
gttcctgggacattcttttcccttggggatccctctccattccatagagc
atgatcaattggatgttctattttacgaatattctctctgtgccaatgag
ttcaaggctcttcccagtttctcttcaataaattcggtgtatccgg

gaattcatttagcaaacgttttggagtgaataatccttatgatttctgta
gttcccagtctagcattttagatcgtcagtaattttgctacttcaattgc
ctctgcattcatgggcctgcttcagggagcagtatgggctttactttgat
ttcaccctaatttccccaatttttcgtcatgcttagtctctggagtgtat
tgggccattatgggccatgggacagaagagacatgagggaggtcgaaggc
aatgaaaagttatttaatcattgacaagtttgtcattctgacacctgaac
agagtttaagaaaatcaccgaccggctgcagttaactgggaaggattagg
agaataattgccttctccgtaagccttttgttgcctttgtgcttctggta
ttactagaagacatttttacctgccattttcagaggtgattaggtatagg
acaatgactgcagacgcaggtgatgagcatcctttgataaaggagctctt
ttgctcacttgagctggaagaatgaacgagttttataaagatgggatcat
ttgataccttgaaatttctgttccgtcctaatcttcctttttcaacttct
ggagaaagtttaaagttgtactagtaactgcttaaatgaagtaaaacaaa
gaaccgccaactataatcgtgggatttatagaaactttagtgttaattta
aaattcagcttctgcattcagaatctgaaatctgacacaggttagagaat
ctctaaaaacacgaatgagaattctcatatttggttttaaaatttgggtt
ctaatgttcattcgctaaccacctttttattgggcatctatattatttca
ggcatgggtttgggcagcagtgacacaatggagaggaaataaagtctggg
tcccacttggtgttacacagcattgaaatgggaccaacggaactgtggag
ccatgaatccagatgggggacactataaaaacctgtcaccagccaggggc
agagggcaatattattggggaggtgtagctatatgctctgtaacatgttg
aggtttacccttgtttattaatgttgatttctcttttccatatctgtcca
atctggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_85596407_85597522
seq2: B6Ng01-331P11.g_67_1174

seq1  GAATTCATTTAGCAAACGTTTTGGAGTGAATAATCCTTATGATTTCTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTAGCAAACGTTTTGGAGTGAATAATCCTTATGATTTCTGTA  50

seq1  GTTCCCAGTCTAGCATTTTAGATCGTCAGTAATTTTGCTACTTCAATTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCAGTCTAGCATTTTAGATCGTCAGTAATTTTGCTACTTCAATTGC  100

seq1  CTCTGCATTCATGGGCCTGCTTCAGGGAGCAGTATGGGCTTTACTTTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCATTCATGGGCCTGCTTCAGGGAGCAGTATGGGCTTTACTTTGAT  150

seq1  TTCACCCTAATTTCCCCAATTTTTCGTCATGCTTAGTCTCTGGAGTGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCCTAATTTCCCCAATTTTTCGTCATGCTTAGTCTCTGGAGTGTAT  200

seq1  TGGGCCATTATGGGCCATGGGACAGAAGAGACATGAGGGAGGTCGAAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCATTATGGGCCATGGGACAGAAGAGACATGAGGGAGGTCGAAGGC  250

seq1  AATGAAAAGTTATTTAATCATTGACAAGTTTGTCATTCTGACACCTGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAAGTTATTTAATCATTGACAAGTTTGTCATTCTGACACCTGAAC  300

seq1  AGAGTTTAAGAAAATCACCGACCGGCTGCAGTTAACTGGGAAGGATTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTAAGAAAATCACCGACCGGCTGCAGTTAACTGGGAAGGATTAGG  350

seq1  AGAATAATTGCCTTCTCCGTAAGCCTTTTGTTGCCTTTGTGCTTCTGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAATTGCCTTCTCCGTAAGCCTTTTGTTGCCTTTGTGCTTCTGGTA  400

seq1  TTACTAGAAGACATTTTTACCTGCCATTTTCAGAGGTGATTAGGTATAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGAAGACATTTTTACCTGCCATTTTCAGAGGTGATTAGGTATAGG  450

seq1  ACAATGACTGCAGACGCAGGTGATGAGCATCCTTTGATAAAGGAGCTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGACTGCAGACGCAGGTGATGAGCATCCTTTGATAAAGGAGCTCTT  500

seq1  TTGCTCACTTGAGCTGGAAGAATGAACGAGTTTTATAAAGATGGGATCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCACTTGAGCTGGAAGAATGAACGAGTTTTATAAAGATGGGATCAT  550

seq1  TTGATACCTTGAAATTTCTGTTCCGTCCTAATCTTCCTTTTTCAACTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACCTTGAAATTTCTGTTCCGTCCTAATCTTCCTTTTTCAACTTCT  600

seq1  GGAGAAAGTTTAAAGTTGTACTAGTAACTGCTTAAATGAAGTAAAACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAGTTTAAAGTTGTACTAGTAACTGCTTAAATGAAGTAAAACAAA  650

seq1  GAACCGCCAACTATAATCGTGGGATTTATAGAAACTTTAGTGTTAATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCGCCAACTATAATCGTGGGATTTATAGAAACTTTAGTGTTAATTTA  700

seq1  AAATTCAGCTTCTGCATTCAGAATCTGAAATCTGACACAGGTTAGAGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAGCTTCTGCATTCAGAATCTGAAATCTGACACAGGTTAGAGAAT  750

seq1  CTCTAAAAACACGAATGAGAATTCTCATATTTGGTTTTAAAATTTGGGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAAACACGAATGAGAATTCTCATATTTGGTTTTAAAATTTGGGTT  800

seq1  CTAATGTTCATTCGCTAACCACCTTTTTATTGGGCATCTATATTATTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTTCATTCGCTAACCACCTTTTTATTGGGCATCTATATTATTTCA  850

seq1  GGCATGGGTTTGGGCAGCAGTGACACAATGGAGAGGAAATAAAGTCTGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGGTTTGGGCAGCAGTGACACAATGGAGAGGAAATAAAGTCTGGG  900

seq1  TCCCACTTGGTGTTACACAGCATTGAAAT-GGACCAACGGAACTGTGGAG  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCCCACTTGGTGTTACACAGCATTGAAATGGGACCAACGGAACTGTGGAG  950

seq1  CCATGAATCCAGATGGGGGACACTATAAAAACCTGTCACCAGCCAGGGGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAATCCAGATGGGGGACACTATAAAAACCTGTCACCAGCCAGGGGC  1000

seq1  AGGAAGGGCAAATATTA-TGGGAGGGTGTAGCTATAATGCTCTTGTACAT  1048
      ||  ||||| ||||||| ||||  ||||||||||| |||||||   ||||
seq2  AG--AGGGC-AATATTATTGGGGAGGTGTAGCTAT-ATGCTCTGTAACAT  1046

seq1  GTTGAAGTTTACCCTTGTGTTATTTAAATGTTGATTTCTCTGTCCCCATA  1098
      ||||| |||||||||||| |||||  ||||||||||||||| |  |||||
seq2  GTTGAGGTTTACCCTTGT-TTATT--AATGTTGATTTCTCT-TTTCCATA  1092

seq1  TCTTGTTTCAATCTGGAC  1116
      |||   | ||||||||||
seq2  TCT--GTCCAATCTGGAC  1108


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