BAC Information

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BAC

Clone NameB6Ng01-335N16
Chromosome18 (Build37)
Map Location 6,154,350 - 6,155,395
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp438, LOC100039442, Zeb1, EG664925, Arhgap12
Downstream geneKif5b, LOC100039469, EG621100, LOC665028, EG622152, Epc1, LOC665047, 4921524L21Rik, LOC100039583, EG665053, Rab18, LOC620787, LOC100039635, Mkx, LOC664778, Armc4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335N16.bB6Ng01-335N16.g
ACCGA120952GA120953
length2351,044
definitionB6Ng01-335N16.b B6Ng01-335N16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aacacacctaatcagcacaaagtagtactagatcaattctccttttcccc
tatatcctttttctctcccacctagtgttggggagttggtagggatatgg
gtttgatgaggaggtagataaaagaacccaatgaagtagtcaatgtttgg
ttacaatactgtttgaaggtgacttaagccatttgaaacctatatttggt
gtcttcggtttttttttgatctggtgaaatcactc
gaattcagcctcactccatttctaaggacacagcaaaatgtaggctaatt
atctgccagattgtgatataactggaccgtagctcagtgctttagtggag
ttggagtccatctaaaacctcttgagcactctctttatttctattgactt
tctggtcttctgcactcctacagcattgccctttaaactcttctcacagc
atggtggggcttttcagcctacttacccagatcctgtcacaaaccagttt
caaaggtccaagagcacacgaccaactgaaacaatgactccacttctttt
atattagttttccatattagatatgtttttaacctctgtgatcacaattt
ttcttagaaacacagaaagaaatatttattttgattcatggtttcactcc
atcttgaaaggaaggtgcagcaaagccttcatcccagttagtgggggtag
gatgcaaccaggggttatcacttctctttagagcagggagcagagggaaa
cactgggagcaagggctaggaatagctttcaaaggttatacctagtgaaa
tacttcactatcctgatggttccacagcctttcagaacagcaccattagc
tgaggaacaagtgttagaacctgagccagtggggacattttattttcaaa
ccataacagtgagaagtaatttgtgttccctgaatgaaagatctcctaac
tatggaacattaaataaagtgcttagtagggtatttccatttaatatctt
ttaaattttttatttgtatttgagtatttattttaagtatatgagtatgt
atatacaccacatatgctaaaagtatgtatgtttagaaacttcctaagtg
tctttactgaaccattcacatacccaccggcactgaaggcgttcctggga
ctccactctgcttggttcttgaagctgtcaatattctggacattgcccta
gtaatagcatgtactaatatctcattgtaatttaatttgcattcctagat
ggcatatggtatggatctcttgatagggtttgtttagaatgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_6154350_6155395
seq2: B6Ng01-335N16.g_67_1110

seq1  GAATTCAGCCTCACTCCATTTCTAAGGACACAGCAAAATGTAGGCTAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCTCACTCCATTTCTAAGGACACAGCAAAATGTAGGCTAATT  50

seq1  ATCTGCCAGATTGTGATATAACTGGACCGTAGCTCAGTGCTTTAGTGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCAGATTGTGATATAACTGGACCGTAGCTCAGTGCTTTAGTGGAG  100

seq1  TTGGAGTCCATCTAAAACCTCTTGAGCACTCTCTTTATTTCTATTGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTCCATCTAAAACCTCTTGAGCACTCTCTTTATTTCTATTGACTT  150

seq1  TCTGGTCTTCTGCACTCCTACAGCATTGCCCTTTAAACTCTTCTCACAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCTTCTGCACTCCTACAGCATTGCCCTTTAAACTCTTCTCACAGC  200

seq1  ATGGTGGGGCTTTTCAGCCTACTTACCCAGATCCTGTCACAAACCAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGGGCTTTTCAGCCTACTTACCCAGATCCTGTCACAAACCAGTTT  250

seq1  CAAAGGTCCAAGAGCACACGACCAACTGAAACAATGACTCCACTTCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTCCAAGAGCACACGACCAACTGAAACAATGACTCCACTTCTTTT  300

seq1  ATATTAGTTTTCCATATTAGATATGTTTTTAACCTCTGTGATCACAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGTTTTCCATATTAGATATGTTTTTAACCTCTGTGATCACAATTT  350

seq1  TTCTTAGAAACACAGAAAGAAATATTTATTTTGATTCATGGTTTCACTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGAAACACAGAAAGAAATATTTATTTTGATTCATGGTTTCACTCC  400

seq1  ATCTTGAAAGGAAGGTGCAGCAAAGCCTTCATCCCAGTTAGTGGGGGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAAAGGAAGGTGCAGCAAAGCCTTCATCCCAGTTAGTGGGGGTAG  450

seq1  GATGCAACCAGGGGTTATCACTTCTCTTTAGAGCAGGGAGCAGAGGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAACCAGGGGTTATCACTTCTCTTTAGAGCAGGGAGCAGAGGGAAA  500

seq1  CACTGGGAGCAAGGGCTAGGAATAGCTTTCAAAGGTTATACCTAGTGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGAGCAAGGGCTAGGAATAGCTTTCAAAGGTTATACCTAGTGAAA  550

seq1  TACTTCACTATCCTGATGGTTCCACAGCCTTTCAGAACAGCACCATTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCACTATCCTGATGGTTCCACAGCCTTTCAGAACAGCACCATTAGC  600

seq1  TGAGGAACAAGTGTTAGAACCTGAGCCAGTGGGGACATTTTATTTTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAACAAGTGTTAGAACCTGAGCCAGTGGGGACATTTTATTTTCAAA  650

seq1  CCATAACAGTGAGAAGTAATTTGTGTTCCCTGAATGAAAGATCTCCTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAACAGTGAGAAGTAATTTGTGTTCCCTGAATGAAAGATCTCCTAAC  700

seq1  TATGGAACATTAAATAAAGTGCTTAGTAGGGTATTTCCATTTAATATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAACATTAAATAAAGTGCTTAGTAGGGTATTTCCATTTAATATCTT  750

seq1  TTAAATTTTTTATTTGTATTTGAGTATTTATTTTAAGTATATGAGTATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTTTTATTTGTATTTGAGTATTTATTTTAAGTATATGAGTATGT  800

seq1  ATATACACCACATATGCTAAAAGTATGTATGTTTAGAAACTTCCTAAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACACCACATATGCTAAAAGTATGTATGTTTAGAAACTTCCTAAGTG  850

seq1  TCTTTACTGAACCATTCACATACCCACCGGCACTGAAGGCGTTCCTGGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACTGAACCATTCACATACCCACCGGCACTGAAGGCGTTCCTGGGA  900

seq1  CTCCACTCTGCTTGGTTCTTGAAGCTGTCAATATTCTGGACATTGCCCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTCTGCTTGGTTCTTGAAGCTGTCAATATTCTGGACATTGCCCTA  950

seq1  GTAATAAGCATGTACTAATATCTCATTGTTATTTTAATTTGCATTTCCTA  1000
      ||||| |||||||||||||||||||||| || ||||||||||| ||||||
seq2  GTAAT-AGCATGTACTAATATCTCATTG-TAATTTAATTTGCA-TTCCTA  997

seq1  GATGGCATATGGTATGGATCTCTTGATA-GGTTTGTTTAGAATGTGT  1046
      |||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GATGGCATATGGTATGGATCTCTTGATAGGGTTTGTTTAGAATGTGT  1044