BAC Information

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BAC

Clone NameB6Ng01-337B18
Chromosome18 (Build37)
Map Location 75,581,778 - 75,708,205
singlet/doubletdoublet
Overlap geneGm672
Upstream geneMyo5b, Acaa2, LOC672799, Lipg, Rpl17, BC031181, Dym, LOC628356, EG667777, Smad7
Downstream geneZbtb7c, 4833419G08Rik, LOC668184, Smad2, LOC668188
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337B18.bB6Ng01-337B18.g
ACCGA121832GA121833
length1,1191,126
definitionB6Ng01-337B18.b B6Ng01-337B18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,707,107 - 75,708,205)(75,581,778 - 75,582,913)
sequence
gaattcaatgttggtgtggcactgaactcagaaaaggaaatgtgtaaaga
ctggaaacaaagatggttttagaaagaaaacagatgagacagggctggtg
gccccactggtcacaccacacatgcataggtggttcggtgtgttgaggaa
tgggtagctgagcctctagcctctgaccaggaaacctgatgcctttgatc
ctgagttgcagccatggcacagagaggtagggtgggaaacctggggcaca
ggcagagaacagacttgcctggtgttgctgatgttggaaatgcttaggca
ggggcagagtcaggtcattaggtccctctgttagaaccacatgggccagc
atcttctcaaagccctcatcccattgcccttccttaaagcaccagggaaa
tctcagaccctctctcctggccaatcctggtatattttagctttgtgacc
tgactgtaagccattgaggacagtaatccttgtgatgtgaaggggaatgt
gccatcccccttctatacaggaggtccctggagcccccaactcactgccc
acaccccctgacttgggaagtgggtgtcattggttaatttggtctcaata
gatcacccaggcagatctctgtcttttcactagcaccttcagtggccacc
cagagttaagagactgatctagttgcaacacattaatgagaccacccatc
ccatgagtggagggttctctggtgcagggagtgagaggggacatttgttg
aaagaaggatttttagttttttaaagactgaaaaccacccgactttgaag
caaacacacattttgggcctgtacctccatttgtctggaagctgcacaga
gtgagccctctgcagagcccgcattccagcatcatttcgcaggtggcctc
atggagtatgctgaagctgtctagactccgtttgagccctgttgctaggt
gagtagccttcaaaggcaaaatttttgcctcctatgaagcagtgtatctt
ttctatcaaataagcccatcctctttttgaaggtagattttgcagaggca
aatcagaacggaacctaaaaggcagctttcgtaatccagggcttaccgga
tctgagaactttgcttgtg
gaattctctctcatacatagaagcctctctcacacacagataattgtctc
tcacacagagaattctcttacacatacacagaactgtctgtcacacacag
aattgtctctcttacacagaattgtgtttcacacacaatttctctcagag
aattctcacacacagaatcctgactctcacttacacagaactgtctttca
cacagagaattctctctctctctctctctctctctctctctcacacacac
acacacacacacacacacacacacacacacacacacagaactgtctctca
cacagaaaattatctctcacacacagaatcttctctcacacacactcaga
actgtctctcatacagagattcttttctctctcacagaattctcttcctc
tcacaagattgtctctcacagacagaactgtctctcacaggcagaattgt
ctctctcacacagaaaattctctctcacacacagaattctctcacataag
agaattctctccctcacagacttttttctaacagaactccttctcacaca
cagaattccttctcacaaacaaaaggggtgtctagagaaagccagccaga
gcaaggctttaaggagcagtacccaggcacacggccacgtagtcccagag
gacatacatgaagctcctgctcttaacccccctgttatgaccaccagcag
taaatagcaaaacccaaaacaataaatccagacaagggggcgctaaccat
gatggctttacctagctgagcggctgcggtgggggacctggcggtaaata
aacgagcaaaaagactgtaaatcaccctgggagaccagatcgatacacag
ggaacttgacccaactctcaccagggagtgtgtgtgccagtagtcctgag
caacggggtggggactctccaggctctgctggttacggagaagccctgtt
tggaacacagggtcgcagcccgcctctgctgggagcttgcggagctaccc
cggggctggtggctgggatctctctgagctgccttcacttgggctgtgaa
tcaaacaggcaactatattctaaggaccctcaggttccttatgctctagt
ctggggtgaatgacagtcctggccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_75707107_75708205
seq2: B6Ng01-337B18.b_47_1165 (reverse)

seq1  CACAAACAAAGTTCTCAGGTTCGTGTAGCCCTTGGTATCAGAAGCTGCTT  50
      ||||| |||||||||||| | ||   |||||| | |  |  ||||||| |
seq2  CACAAGCAAAGTTCTCAGATCCGGTAAGCCCTGGATTACGAAAGCTGCCT  50

seq1  TCTAGGTACCG-TCTGATTTG-CACTGCAAAATCTACCTAC-AAAAGA-G  96
      | ||||| ||| ||||||||| | ||||||||||||||| | |||||| |
seq2  TTTAGGTTCCGTTCTGATTTGCCTCTGCAAAATCTACCTTCAAAAAGAGG  100

seq1  ATGGGC-TATTTGATAG--AAGATACACTGCTTCA-AAGAGGC-AAAATT  141
      |||||| ||||||||||  |||||||||||||||| | ||||| ||||||
seq2  ATGGGCTTATTTGATAGAAAAGATACACTGCTTCATAGGAGGCAAAAATT  150

seq1  TTGCCTT--GAGGCTACTCACCTAGCAACAGGGCTCAAACGGAGTCTAGA  189
      |||||||   ||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTTGAAGGCTACTCACCTAGCAACAGGGCTCAAACGGAGTCTAGA  200

seq1  CAGC-TCAGCATACT-CATGAGGCCACCTGCG-AATGATGCTGGAATGCG  236
      |||| |||||||||| |||||||||||||||| |||||||||||||||||
seq2  CAGCTTCAGCATACTCCATGAGGCCACCTGCGAAATGATGCTGGAATGCG  250

seq1  GGCTCTGCAGA-GGCTCACTCTGTGCAGCTTCCAGAC-AATGGAGGTACA  284
      ||||||||||| ||||||||||||||||||||||||| ||||||||||||
seq2  GGCTCTGCAGAGGGCTCACTCTGTGCAGCTTCCAGACAAATGGAGGTACA  300

seq1  GGCC--AAATGTGTGTTTGCTTC-AAGTCGGGTGGTTTTCAGTCTTT-AA  330
      ||||  ||||||||||||||||| ||||||||||||||||||||||| ||
seq2  GGCCCAAAATGTGTGTTTGCTTCAAAGTCGGGTGGTTTTCAGTCTTTAAA  350

seq1  AAACTAAAAATCCTTCTTTCAACAAATGTCCCCTCTCACTCCCTGCACCA  380
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAAAATCCTTCTTTCAACAAATGTCCCCTCTCACTCCCTGCACCA  400

seq1  GAGAACCCTCCACTCATGGGATGGGTGGTCTCATTAATGTGTTGCAACTA  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACCCTCCACTCATGGGATGGGTGGTCTCATTAATGTGTTGCAACTA  450

seq1  GATCAGTCTCTTAACTCTGGGTGGCCACTGAAGGTGCTAGTGAAAAGACA  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTCTCTTAACTCTGGGTGGCCACTGAAGGTGCTAGTGAAAAGACA  500

seq1  GAGATCTGCCTGGGTGATCTATTGAGACCAAATTAACCAATGACACCCAC  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCTGCCTGGGTGATCTATTGAGACCAAATTAACCAATGACACCCAC  550

seq1  TTCCCAAGTCAGGGGGTGTGGGCAGTGAGTTGGGGGCTCCAGGGACCTCC  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAAGTCAGGGGGTGTGGGCAGTGAGTTGGGGGCTCCAGGGACCTCC  600

seq1  TGTATAGAAGGGGGATGGCACATTCCCCTTCACATCACAAGGATTACTGT  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGAAGGGGGATGGCACATTCCCCTTCACATCACAAGGATTACTGT  650

seq1  CCTCAATGGCTTACAGTCAGGTCACAAAGCTAAAATATACCAGGATTGGC  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATGGCTTACAGTCAGGTCACAAAGCTAAAATATACCAGGATTGGC  700

seq1  CAGGAGAGAGGGTCTGAGATTTCCCTGGTGCTTTAAGGAAGGGCAATGGG  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAGAGGGTCTGAGATTTCCCTGGTGCTTTAAGGAAGGGCAATGGG  750

seq1  ATGAGGGCTTTGAGAAGATGCTGGCCCATGTGGTTCTAACAGAGGGACCT  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGGCTTTGAGAAGATGCTGGCCCATGTGGTTCTAACAGAGGGACCT  800

seq1  AATGACCTGACTCTGCCCCTGCCTAAGCATTTCCAACATCAGCAACACCA  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCTGACTCTGCCCCTGCCTAAGCATTTCCAACATCAGCAACACCA  850

seq1  GGCAAGTCTGTTCTCTGCCTGTGCCCCAGGTTTCCCACCCTACCTCTCTG  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTCTGTTCTCTGCCTGTGCCCCAGGTTTCCCACCCTACCTCTCTG  900

seq1  TGCCATGGCTGCAACTCAGGATCAAAGGCATCAGGTTTCCTGGTCAGAGG  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGGCTGCAACTCAGGATCAAAGGCATCAGGTTTCCTGGTCAGAGG  950

seq1  CTAGAGGCTCAGCTACCCATTCCTCAACACACCGAACCACCTATGCATGT  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGGCTCAGCTACCCATTCCTCAACACACCGAACCACCTATGCATGT  1000

seq1  GTGGTGTGACCAGTGGGGCCACCAGCCCTGTCTCATCTGTTTTCTTTCTA  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTGACCAGTGGGGCCACCAGCCCTGTCTCATCTGTTTTCTTTCTA  1050

seq1  AAACCATCTTTGTTTCCAGTCTTTACACATTTCCTTTTCTGAGTTCAGTG  1080
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATCTTTGTTTCCAGTCTTTACACATTTCCTTTTCTGAGTTCAGTG  1100

seq1  CCACACCAACATTGAATTC  1099
      |||||||||||||||||||
seq2  CCACACCAACATTGAATTC  1119

seq1: chr18_75581778_75582913
seq2: B6Ng01-337B18.g_64_1189

seq1  GAATTCTCTCTCATACATAGAAGCCTCTCTCACACACAGATAATTGTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCATACATAGAAGCCTCTCTCACACACAGATAATTGTCTC  50

seq1  TCACACAGAGAATTCTCTTACACATACACAGAACTGTCTGTCACACACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAGAGAATTCTCTTACACATACACAGAACTGTCTGTCACACACAG  100

seq1  AATTGTCTCTCTTACACAGAATTGTGTTTCACACACAATTTCTCTCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCTCTCTTACACAGAATTGTGTTTCACACACAATTTCTCTCAGAG  150

seq1  AATTCTCACACACAGAATCCTGACTCTCACTTACACAGAACTGTCTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCACACACAGAATCCTGACTCTCACTTACACAGAACTGTCTTTCA  200

seq1  CACAGAGAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACAC  250

seq1  ACACACACACACACACACACACACACACACACACACAGAACTGTCTCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACAGAACTGTCTCTCA  300

seq1  CACAGAAAATTATCTCTCACACACAGAATCTTCTCTCACACACACTCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAATTATCTCTCACACACAGAATCTTCTCTCACACACACTCAGA  350

seq1  ACTGTCTCTCATACAGAGATTCTTTTCTCTCTCACAGAATTCTCTTCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTCTCATACAGAGATTCTTTTCTCTCTCACAGAATTCTCTTCCTC  400

seq1  TCACAAGATTGTCTCTCACAGACAGAACTGTCTCTCACAGGCAGAATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGATTGTCTCTCACAGACAGAACTGTCTCTCACAGGCAGAATTGT  450

seq1  CTCTCTCACACAGAAAATTCTCTCTCACACACAGAATTCTCTCACATAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCACACAGAAAATTCTCTCTCACACACAGAATTCTCTCACATAAG  500

seq1  AGAATTCTCTCCCTCACAGACTTTTTTCTAACAGAACTCCTTCTCACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCTCTCCCTCACAGACTTTTTTCTAACAGAACTCCTTCTCACACA  550

seq1  CAGAATTCCTTCTCACAAACAAAAGGGGTGTCTAGAGAAAGCCAGCCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTCCTTCTCACAAACAAAAGGGGTGTCTAGAGAAAGCCAGCCAGA  600

seq1  GCAAGGCTTTAAGGAGCAGTACCCAGGCACACGGCCACGTAGTCCCAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGCTTTAAGGAGCAGTACCCAGGCACACGGCCACGTAGTCCCAGAG  650

seq1  GACATACATGAAGCTCCTGCTCTTAACCCCCCTGTTATGACCACCAGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATACATGAAGCTCCTGCTCTTAACCCCCCTGTTATGACCACCAGCAG  700

seq1  TAAATAGCAAAACCCAAAACAATAAATCCAGACAAGGGGGCGCTAACCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGCAAAACCCAAAACAATAAATCCAGACAAGGGGGCGCTAACCAT  750

seq1  GATGGCTTTACCTAGCTGAGCGGCTGCGGTGGGGGACCTGGCGGTAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTTTACCTAGCTGAGCGGCTGCGGTGGGGGACCTGGCGGTAAATA  800

seq1  AACGAGCAAAAAGACTGTAAATCACCCTGGGAGACCAGATCGATACACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAGCAAAAAGACTGTAAATCACCCTGGGAGACCAGATCGATACACAG  850

seq1  GGAACTTGACCCAACTCTCACCAGGGAGTGTGTGTGCCAGTAGTCCTGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTTGACCCAACTCTCACCAGGGAGTGTGTGTGCCAGTAGTCCTGAG  900

seq1  CAACGGGGTGGGGACTCTCCAGGCTCTGCTGG-TACGGAGAAGCCCTGTT  949
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAACGGGGTGGGGACTCTCCAGGCTCTGCTGGTTACGGAGAAGCCCTGTT  950

seq1  TGGAACACAGGGTCGCAGCCCGCCTCTGCTGGGAGCTTGCGGAGCTACCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACACAGGGTCGCAGCCCGCCTCTGCTGGGAGCTTGCGGAGCTACCC  1000

seq1  CGGGGCTGGTGGCT-GGATCTCTCTGAGCTGCCTTCACTTGGGCTGTGAA  1048
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CGGGGCTGGTGGCTGGGATCTCTCTGAGCTGCCTTCACTTGGGCTGTGAA  1050

seq1  TCAAACAGGCACCAATATTCTAA-GACCC-CA-GTTCCCTATGCTCTAGT  1095
      ||||||||||| | ||||||||| ||||| || ||||| |||||||||||
seq2  TCAAACAGGCAACTATATTCTAAGGACCCTCAGGTTCCTTATGCTCTAGT  1100

seq1  CTGGGGTGAATGACAGTTCTGCCAAGACCCCAGCTGGCCAG  1136
      |||||||||||||||||                ||||||||
seq2  CTGGGGTGAATGACAGT---------------CCTGGCCAG  1126