BAC Information

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BAC

Clone NameB6Ng01-343L05
Chromosome18 (Build37)
Map Location 85,981,728 - 85,982,889
singlet/doubletsinglet
Overlap genenone
Upstream geneCyb5, Fbxo15, 1700034H14Rik, LOC100039765, LOC665382
Downstream geneLOC545269, LOC545270, LOC665402, Neto1, Cbln2, LOC100039872, LOC100039881, LOC665437
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343L05.bB6Ng01-343L05.g
ACCGA126411GA126412
length1,1581,157
definitionB6Ng01-343L05.b B6Ng01-343L05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atcaatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatcttcaaccct
ataggtggacacattatgactaaccagtaccctgagctctggactctagc
tgcatatgtatcaaaagatggctagtcggcatcactggaagaagaggtcc
atggaaccgcagacttgtgtgcccgggtacagggacgccagggcaagggg
ggggaagt
gaattcatgaatttaaattttagttctatttcattttggattttcttcaa
acagttttttattaaattatattttcatatcttgaattacttacattcag
cctttctgttgtatttttatcatctttattttggtatttattgcactcct
ctttgggttatttcattatatttactatgattactttaaatttttgttcc
ctatgccatttgagttacttttctgggacaacattactgttgaagtattg
cttcttggcaaagacttagttgtgtttgtgtatttgcaatgggacttagg
taatttagaggccactacaattatttgtagtgcatatatttgtttttctt
atctctgtgacaatattaacccacacaagcaaccttgggtaagaagagtt
atgttaggtccccagcatcagttcataatgctgaagaaagcatatagaaa
tgaggcaaatgggattttgtagcggagcttcctcacagcttaatgtatca
taaccaggctatgggcttcatagctactagctagatctcatgttccagag
gctccacaagttcccccaatgatgccactatcaaaattctccaatccatg
ggattgtggggcacgttgtactttgaaagaatattttttattgtttgcat
agtctcttttggcatctggaatttttaaaaatgcaataagctcaagaaaa
cattgttgtattattgtctagttgaaactctaactggatcaatatacttg
aggcacttgaaaatattaatagaggcactgctctttccttccaattgtta
gaaaattaatcagtaaaatattgctacatgagaaattgcaaaactgtatg
cttctttataatgaagcatagaaaagcaattgagggctagtttcccatca
cacattccctttaagcagaaagtcttcacactaacagctatctgaaattc
aagtaaactgaatgttaatctctcagactctgtgtgtctcagactttatt
cttttcctttatactgaatgatttcattatgcatctgaaagaataactac
aggatgaaacacatgtctccataaaattacaaataatagcattggttcta
gaaacagccaccacgtaaagttggtgtgaggagtcagttacatattctga
ttataca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_85981728_85982889
seq2: B6Ng01-343L05.g_66_1222

seq1  GAATTCATGAATTTAAATTTTAGTTCTATTTCATTTTGGATTTTCTTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAATTTAAATTTTAGTTCTATTTCATTTTGGATTTTCTTCAA  50

seq1  ACAGTTTTTTATTAAATTATATTTTCATATCTTGAATTACTTACATTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTTTTATTAAATTATATTTTCATATCTTGAATTACTTACATTCAG  100

seq1  CCTTTCTGTTGTATTTTTATCATCTTTATTTTGGTATTTATTGCACTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTGTTGTATTTTTATCATCTTTATTTTGGTATTTATTGCACTCCT  150

seq1  CTTTGGGTTATTTCATTATATTTACTATGATTACTTTAAATTTTTGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGTTATTTCATTATATTTACTATGATTACTTTAAATTTTTGTTCC  200

seq1  CTATGCCATTTGAGTTACTTTTCTGGGACAACATTACTGTTGAAGTATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCATTTGAGTTACTTTTCTGGGACAACATTACTGTTGAAGTATTG  250

seq1  CTTCTTGGCAAAGACTTAGTTGTGTTTGTGTATTTGCAATGGGACTTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGGCAAAGACTTAGTTGTGTTTGTGTATTTGCAATGGGACTTAGG  300

seq1  TAATTTAGAGGCCACTACAATTATTTGTAGTGCATATATTTGTTTTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAGAGGCCACTACAATTATTTGTAGTGCATATATTTGTTTTTCTT  350

seq1  ATCTCTGTGACAATATTAACCCACACAAGCAACCTTGGGTAAGAAGAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGTGACAATATTAACCCACACAAGCAACCTTGGGTAAGAAGAGTT  400

seq1  ATGTTAGGTCCCCAGCATCAGTTCATAATGCTGAAGAAAGCATATAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAGGTCCCCAGCATCAGTTCATAATGCTGAAGAAAGCATATAGAAA  450

seq1  TGAGGCAAATGGGATTTTGTAGCGGAGCTTCCTCACAGCTTAATGTATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAAATGGGATTTTGTAGCGGAGCTTCCTCACAGCTTAATGTATCA  500

seq1  TAACCAGGCTATGGGCTTCATAGCTACTAGCTAGATCTCATGTTCCAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAGGCTATGGGCTTCATAGCTACTAGCTAGATCTCATGTTCCAGAG  550

seq1  GCTCCACAAGTTCCCCCAATGATGCCACTATCAAAATTCTCCAATCCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACAAGTTCCCCCAATGATGCCACTATCAAAATTCTCCAATCCATG  600

seq1  GGATTGTGGGGCACGTTGTACTTTGAAAGAATATTTTTTATTGTTTGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGTGGGGCACGTTGTACTTTGAAAGAATATTTTTTATTGTTTGCAT  650

seq1  AGTCTCTTTTGGCATCTGGAATTTTTAAAAATGCAATAAGCTCAAGAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTTTTGGCATCTGGAATTTTTAAAAATGCAATAAGCTCAAGAAAA  700

seq1  CATTGTTGTATTATTGTCTAGTTGAAACTCTAACTGGATCAATATACTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTGTATTATTGTCTAGTTGAAACTCTAACTGGATCAATATACTTG  750

seq1  AGGCACTTGAAAATATTAATAGAGGCACTGCTCTTTCCTTCCAATTGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTTGAAAATATTAATAGAGGCACTGCTCTTTCCTTCCAATTGTTA  800

seq1  GAAAATTAATCAGTAAAATATTGCTACATGAGAAATTGCAAAACTGTATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTAATCAGTAAAATATTGCTACATGAGAAATTGCAAAACTGTATG  850

seq1  CTTCTTTATAATGAAGCATAGAAAAGCAATTGAGGGCTAGTTTCCCATCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTATAATGAAGCATAGAAAAGCAATTGAGGGCTAGTTTCCCATCA  900

seq1  CACATTCCCTTTAAGCAGAAAGTCTTCACACTAACAGCTATCTGAAATTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCCCTTTAAGCAGAAAGTCTTCACACTAACAGCTATCTGAAATTC  950

seq1  AAGTAAACTGAATGTTAATCTCTCAGACTCTGTGTGTCTCAGACTTTATT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAACTGAATGTTAATCTCTCAGACTCTGTGTGTCTCAGACTTTATT  1000

seq1  CTTTTCCTTTATACTGAATGAATTTCATTATTGCATCTGAAAGAATAACT  1050
      |||||||||||||||||||| ||||||||| |||||||||||||||||| 
seq2  CTTTTCCTTTATACTGAATG-ATTTCATTA-TGCATCTGAAAGAATAAC-  1047

seq1  TACAGGATGAAACACATGTCTCCATAAAATTACAAATAATAGCATTGGTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGATGAAACACATGTCTCCATAAAATTACAAATAATAGCATTGGTT  1097

seq1  CTAG-AACAGCCA-CACGTTAAAGGTTTGTGTGAGGAGTCAG-TACATAT  1147
      |||| |||||||| |||||  || ||| |||||||||||||| |||||||
seq2  CTAGAAACAGCCACCACGT--AAAGTTGGTGTGAGGAGTCAGTTACATAT  1145

seq1  TCCTGGATTTATACA  1162
      | |||   |||||||
seq2  T-CTG--ATTATACA  1157