BAC Information

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BAC

Clone NameB6Ng01-349G01
Chromosome18 (Build37)
Map Location 26,296,755 - 26,395,882
singlet/doubletdoublet
Overlap genenone
Upstream gene5730494M16Rik, AW554918, Brunol4, LOC100041241, LOC665916, LOC100041263, LOC100041274
Downstream geneEG665977
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349G01.bB6Ng01-349G01.g
ACCGA130388GA130389
length958132
definitionB6Ng01-349G01.b B6Ng01-349G01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,296,755 - 26,297,701)(26,395,751 - 26,395,882)
sequence
gaattcaccaaacttgatgtgtttcacagaaagaaatgtttctggtcctg
agaatactggaaaatacacaaatgaagtttaatccacataagagcatata
taccatgttttatatatgtgtgatatgagtttcttattctaaccaatctg
aaatctggcttaagaattgaacaaaaatgaatacttttatatacataaat
tgttggcaaaagtctcgacaagaaagagtgtgttatgtattaagtaacaa
aatttcatttaactatgaaacaagcacatacatgggaaatatattgccaa
aatactccatacctattacataaaagtaacttatatagagaaagagtgga
caaagaagagaaacactgcaacatcaggtgccaaggtgaattgatatcca
ttggaggcctccccttctctgaggacaaagggaggaggcatataaggagg
ggagaagagagagtggaattggaaggagggaggagaagctcggatcggga
tttaaagtaaataagcaaactaattttaaaaagagatactaaactcattt
taggtggctaatgtaaatttaacactggatgaacacagcatgagacagaa
aatgtatgaggctaaaatatacatgtgcacctcaaatataatattaggaa
atcagactggccagtgtataaagctagctcttactgtcacaacacttgaa
aaagcaaccacaaaaatgttgtcataagatgtgggaaatagtgtagttat
aaaaatatcgtggcaattctttcacattaaaagttagagtaaaatctcta
caagattcaactcattaaattaaggaaagaactgaataaattagaaagcc
tgtttttcaattttaagcatgaacaatgaacagtggaattaaacttttta
cacctattggcaatattatgttggggaggaaactgtaagtcatttggtca
ttgaattg

tatagataaggttaacagctattaagttactaaggcttagagtgaagtgt
agaaagagagaatacgcttactacaacataactgaggcagagataaatga
gagagggagagggagagggagagggagaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_26296755_26297701
seq2: B6Ng01-349G01.b_48_1005

seq1  GAATTCACCAAACTTGATGTGTTTCACAGAAAGAAATGTTTCTGGTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAAACTTGATGTGTTTCACAGAAAGAAATGTTTCTGGTCCTG  50

seq1  AGAATACTGGAAAATACACAAATGAAGTTTAATCCACATAAGAGCATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACTGGAAAATACACAAATGAAGTTTAATCCACATAAGAGCATATA  100

seq1  TACCATGTTTTATATATGTGTGATATGAGTTTCTTATTCTAACCAATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATGTTTTATATATGTGTGATATGAGTTTCTTATTCTAACCAATCTG  150

seq1  AAATCTGGCTTAAGAATTGAACAAAAATGAATACTTTTATATACATAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGGCTTAAGAATTGAACAAAAATGAATACTTTTATATACATAAAT  200

seq1  TGTTGGCAAAAGTCTCGACAAGAAAGAGTGTGTTATGTATTAAGTAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGCAAAAGTCTCGACAAGAAAGAGTGTGTTATGTATTAAGTAACAA  250

seq1  AATTTCATTTAACTATGAAACAAGCACATACATGGGAAATATATTGCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCATTTAACTATGAAACAAGCACATACATGGGAAATATATTGCCAA  300

seq1  AATACTCCATACCTATTACATAAAAGTAACTTATATAGAGAAAGAGTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTCCATACCTATTACATAAAAGTAACTTATATAGAGAAAGAGTGGA  350

seq1  CAAAGAAGAGAAACACTGCAACATCAGGTGCCAAGGTGAATTGATATCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAGAGAAACACTGCAACATCAGGTGCCAAGGTGAATTGATATCCA  400

seq1  TTGGAGGCCTCCCCTTCTCTGAGGACAAAGGGAGGAGGCATATAAGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGCCTCCCCTTCTCTGAGGACAAAGGGAGGAGGCATATAAGGAGG  450

seq1  GGAGAAGAGAGAGTGGAATTGGAAGGAGGGAGGAGAAGCTCGGATCGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGAGAGAGTGGAATTGGAAGGAGGGAGGAGAAGCTCGGATCGGGA  500

seq1  TTTAAAGTAAATAAGCAAACTAATTTTAAAAAGAGATACTAAACTCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGTAAATAAGCAAACTAATTTTAAAAAGAGATACTAAACTCATTT  550

seq1  TAGGTGGCTAATGTAAATTTAACACTGGATGAACACAGCATGAGACAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGGCTAATGTAAATTTAACACTGGATGAACACAGCATGAGACAGAA  600

seq1  AATGTATGAGGCTAAAATATACATGTGCACCTCAAATATAATATTAGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATGAGGCTAAAATATACATGTGCACCTCAAATATAATATTAGGAA  650

seq1  ATCAGACTGGCCAGTGTATAAAGCTAGCTCTTACTGTCACAACACTTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGACTGGCCAGTGTATAAAGCTAGCTCTTACTGTCACAACACTTGAA  700

seq1  AAAGCAACCACAAAAATGTTGTCATAAGATGT-GGAAATAGTGTAGTTAT  749
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAAGCAACCACAAAAATGTTGTCATAAGATGTGGGAAATAGTGTAGTTAT  750

seq1  -AAAATATCGTGGCAATTC-TTCACATTAAAAGTTAGAGTAAAATCTCTA  797
       |||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAAAATATCGTGGCAATTCTTTCACATTAAAAGTTAGAGTAAAATCTCTA  800

seq1  CAAGA-TCAACTCAATAAATTAAGGAAAGAACTGAATAAATTAG-AAGCC  845
      ||||| |||||||| ||||||||||||||||||||||||||||| |||||
seq2  CAAGATTCAACTCATTAAATTAAGGAAAGAACTGAATAAATTAGAAAGCC  850

seq1  TG-TTTTCAATTTTAAGCATGAACAATG-ACAGTGGAATTAAACTTTTTA  893
      || ||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGTTTTTCAATTTTAAGCATGAACAATGAACAGTGGAATTAAACTTTTTA  900

seq1  CACCTA-TGGCAATATTATGTTGGGGA-GAAACTGTAAGTCATT--GTCA  939
      |||||| |||||||||||||||||||| ||||||||||||||||  ||||
seq2  CACCTATTGGCAATATTATGTTGGGGAGGAAACTGTAAGTCATTTGGTCA  950

seq1  TTGAATTG  947
      ||||||||
seq2  TTGAATTG  958


seq1: chr18_26395751_26395882
seq2: B6Ng01-349G01.g_72_203 (reverse)

seq1  TCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCTCATTTATCTCTGCCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCTCATTTATCTCTGCCTCA  50

seq1  GTTATGTTGTAGTAAGCGTATTCTCTCTTTCTACACTTCACTCTAAGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTTGTAGTAAGCGTATTCTCTCTTTCTACACTTCACTCTAAGCCT  100

seq1  TAGTAACTTAATAGCTGTTAACCTTATCTATA  132
      ||||||||||||||||||||||||||||||||
seq2  TAGTAACTTAATAGCTGTTAACCTTATCTATA  132


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