Query= MSMg01no048_b17.b1 MSMg01no048_b17.b1 CHROMAT_FILE:
MSMg01no048_b17.b1 PHD_FILE: MSMg01no048_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:40 2005
(128 letters)
>mm_chr18_85796921_85797448
Length = 528
Score = 134 bits (69), Expect = 3e-36
Identities = 112/133 (84%), Gaps = 18/133 (13%)
Strand = Plus / Plus
Query: 5 gaggatccgcggaattcc-tttagaaggggaaacctataa---accttggagatggttag 60
|||||||| |||||||| |||||||||||||| || || |||||||||||||||||
Sbjct: 205 gaggatcc-tggaattccatttagaaggggaaa--taaaatagaccttggagatggttag 261
Query: 61 agggaaagaattgaacgcctttag--gaggt---gcccagggcatcagctgtggggacat 115
||||||||||||||||| ||| ||||| | ||||||||||||||||||||||
Sbjct: 262 agggaaagaattgaacgg---tagaggaggtaggg---agggcatcagctgtggggacat 315
Query: 116 tggggtaggggtg 128
|||||||||||||
Sbjct: 316 tggggtaggggtg 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 128
Length of database: 528
Length adjustment: 8
Effective length of query: 120
Effective length of database: 520
Effective search space: 62400
Effective search space used: 62400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no048_b17.g1 MSMg01no048_b17.g1 CHROMAT_FILE:
MSMg01no048_b17.g1 PHD_FILE: MSMg01no048_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:40 2005
(748 letters)
>mm_chr18_86064803_86065950
Length = 1148
Score = 1330 bits (688), Expect = 0.0
Identities = 733/748 (97%)
Strand = Plus / Plus
Query: 1 ggcatagtttttcatgtatatgttattggcaggaataaggagtgagcttaggaaatgctt 60
||||||||||||||| |||| |||||||| | ||||||||||||||||||||||||||||
Sbjct: 201 ggcatagtttttcatttataagttattgggatgaataaggagtgagcttaggaaatgctt 260
Query: 61 cagaatcttttgggtgactttgatcattttgagaactaagtacaaaagaaagacagaagc 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 cagaaacttttgggtgactttgatcattttgagaactaagtacaaaagaaagacagatgc 320
Query: 121 ataaatcaataactttctatcttcttagttttatcgtttgctaggcttttactgagtgcc 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 ataaatcaataactttctatcttcttatttttatcgtttgctaggcttttactgagtgcc 380
Query: 181 tattatttatgacatctcatatgccatacatacatgaattattggacaccatcttcaaat 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 tattatttatgacatctcatatgccatacatatatgaattattggacaccatcttcaaat 440
Query: 241 aacttactagtcaaattactgaaagcatgctcttcattcaagtataaaaagttttttagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacttactagtcaaattactgaaagcatgctcttcattcaagtataaaaagttttttagt 500
Query: 301 ataagtctttgagtataaaattagtgacaagacatcaattcaattacaggtagagaatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataagtctttgagtataaaattagtgacaagacatcaattcaattacaggtagagaatca 560
Query: 361 tcagttaaattaattagtatatagtagtaagagttagcaaattcttggaaataagccttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcagttaaattaattagtatatagtagtaagagttagcaaattcttggaaataagccttc 620
Query: 421 ctgttccttatttaaattttattaagatataactaaataatattatgtctttagagaaga 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgttccttacttaaattttattaagatataactaaataatattatgtctttagagaaga 680
Query: 481 gaagaataaaaaacagaggatgctaagtgagatgagacctgtaagctacagttaagattt 540
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 681 gaagaataaaaaacagaggatgctaagtgagatgagacttgtaagctacagttaagattt 740
Query: 541 aaattcagggatgtagctcagttggtacagtgcttgaataagatgttcaaaacctgtaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaattcagggatgtagctcagttggtacagtgcttgaataagatgttcaaaacctgtaca 800
Query: 601 gaaagtccactatataaaaccagacaaggtggtgtatatctgtagtaatatcacttggaa 660
||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 801 gaaagcccactatataaaaccagacaaggtggggtatatctgtagtaacatcacttggaa 860
Query: 661 tgtagaggcaaaaccagaatttccatggcatctttagctatacaaagcaattgttcagaa 720
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 861 tgtagaggcagaaccagaatttccatggcatctttagctatacaaagcaattgttcagga 920
Query: 721 aggtcttatacacataccctgcaggata 748
||||||||||||||||||||||||||||
Sbjct: 921 aggtcttatacacataccctgcaggata 948
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 748
Length of database: 1148
Length adjustment: 10
Effective length of query: 738
Effective length of database: 1138
Effective search space: 839844
Effective search space used: 839844
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
