TATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGAGATCCGCGGA
ATTCAATCTTTTGTGCCCCCCCAACCCCCTTCATCCATGTTTGGGGACTG
GAGAGCTGGCTCAGCAGCTAAGACCACTGACCGCTCCTCCAGAAGATCGG
GAGTCAATTCCCAGCACCCACTTGGTGGATTAAAACCCATCTGTTAACTC
CAGTCCCAGGGGACCCGACACCCTCTTCTTGCCTCTTTGGGTACCAGACA
CTCACATGGTACACAAACAGAGGTGCAGGCAATACATATAAATAAAAACT
TTAAAAAATGGTCTTTGTTTGTTTATAGTAGAGTCTCGTGTAGCCCAGGA
TGGCTCTTCATGCTCTTATGCCACCCAACGAGACCTTAAACTCCTGATCC
CCTGCCTCCAAGTCTGAAGTACTGGTATTTCAGGTGTGCACCATCACATC
CAGCTTAATAGTAATAATAATAATAATAATAATAATAATAAATAATAACT
CCACTGCAGGGGACATTTTGTAGAAAAAACCTTCTCCTTGTTATTTTTTA
AAAGTTTAAAAGACTTATATGTATGAATGTCGCAAGTGCACATAAGCTGT
GTAGTGTGTGTTGCGCGTGCCGTGCCGTGTTGTACATGTACTATATGCCT
GTCATATTCCACAAGAGTTTATCAACAATCTTTGGATCCCT

NACGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACCATGGTATCTGAGGAAGAACCTGC
ACTGATGTTCTTTAAGGATGAACAGTAACCCATAAGATGAAATAAATCAT
TGCATTAAATTGCCTTCAGATAGTGTATTTTGTCCAAGCAATAGAGAAAT
AAACTAGAACATCCTGTTAACAATTCCTATGTACATTACTTATATTGTAA
AGATCAGGAAACTATGAAGGAATTTGTCTTAAAATTATAAAGTAGCCATT
TCAGAATGCAGCATGTCTCATCTTAATAAAGTTTCAGTACTCATTTGCAG
ATATCAACATATCCAAATATAACCAACTGAACTAATGCATATGAAAAAAA
TCTATTAACAAGATCACACATCTATGTCTCATAGTAAAGGTATGTCTATA
TAAGTGACAGCATACAATAATAAACATCATCTTTGGAACAAACTAAAAGA
ATATTTACAATAGGGAAAACTTGCATCAAAAATCATCAAAAAAGAGAGAT
AAATATCTACATTATGGTTTTCAATCTTTCTGCCACCTCCTAGAGTATTA
AGGTAGGAAATAGTGGGTATCATTATTTCTCCAAATGTGCTCCACGATAC
ATGTTGGGCTTCATGTGACATTCTGTGACAACATATCTTG

Query= MSMg01no053_k24.g1 MSMg01no053_k24.g1 CHROMAT_FILE:
MSMg01no053_k24.g1 PHD_FILE: MSMg01no053_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:40 2005
         (529 letters)



>mm_chr18_18684389_18685316
          Length = 928

 Score =  977 bits (505), Expect = 0.0
 Identities = 523/529 (98%), Gaps = 1/529 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   accatggtatctgaggaagaacctgcactgatgttctttaaggatgaacagtaacccata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 accatggtatctgaggaagaacctgcactgatgttctttaaggatgaacagtaacccata 806

                                                                       
Query: 61  agatgaaataaatcattgcattaaattgccttcagatagtgtattttgtccaagcaatag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 agatgaaataaatcattgcattaaattgccttcagatagtgtattttgtccaagcaatag 746

                                                                       
Query: 121 agaaataaactagaacatcctgttaacaattcctatgtacattacttatattgtaaagat 180
           ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 745 agaaataaactagaacatcctgttaacagctcctatgtacattacttatattgtaaagat 686

                                                                       
Query: 181 caggaaactatgaaggaatttgtcttaaaattataaagtagccatttcagaatgcagcat 240
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 685 caggaaactatgaaggaatttgtcttaaaattataaaatagccatttcagaatgcagcat 626

                                                                       
Query: 241 gtctcatcttaataaagtttcagtactcatttgcagatatcaacatatccaaatataacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtctcatcttaataaagtttcagtactcatttgcagatatcaacatatccaaatataacc 566

                                                                       
Query: 301 aactgaactaatgcatatgaaaaaaatctattaacaagatcacacatctatgtctcatag 360
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 565 aactgaactaatgcatatgaaaaaaatctattaacaagatcacacagctatgtctcatag 506

                                                                       
Query: 361 taaaggtatgtctatataagtgacagcatacaataataaacatcatctttggaacaaact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaaggtatgtctatataagtgacagcatacaataataaacatcatctttggaacaaact 446

                                                                       
Query: 421 aaaagaatatttacaatagggaaaacttgcatcaaaaatcatcaaaaaagagagataaat 480
           |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 445 aaaagaatatttacaataggaaaaacttgcatcaaaaatcatcaaaaa-gagagataaat 387

                                                            
Query: 481 atctacattatggttttcaatctttctgccacctcctagagtattaagg 529
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atctacattatggttttcaatctttctgccacctcctagagtattaagg 338


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 928
Length adjustment: 10
Effective length of query: 519
Effective length of database: 918
Effective search space:   476442
Effective search space used:   476442
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)