Query= MSMg01no060_m14.b1 MSMg01no060_m14.b1 CHROMAT_FILE:
MSMg01no060_m14.b1 PHD_FILE: MSMg01no060_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:36 2005
(267 letters)
>mm_chr18_77911925_77912592
Length = 668
Score = 456 bits (236), Expect = e-133
Identities = 254/260 (97%), Gaps = 3/260 (1%)
Strand = Plus / Minus
Query: 7 ggaattctcacagttccttctctgtaa-atactgtttgaacttccgtcattgccttttta 65
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 465 ggaattctcacaggtccttctctgtaacatactgtttgaacttccgtcattgccttttta 406
Query: 66 gcactgcatagattaaagactcgttgttgagcattattactaagtacaagtacattttcc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gcactgcatagattaaagactcgttgttgagcattattactaagtacaagtacattttcc 346
Query: 126 tcaggactaggcaccttgctttattatctagcctctgcacttgagcttatggtgtctgaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tcaggactaggcaccttgctttattatctagcctctgcacttgagcttatggtgtctgaa 286
Query: 186 atgatacattctttcattaaagctttctaattactggccctcctaaaacagttggtttt- 244
||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 285 atgatacattctttcattaaagctttctaattactggtcctcctaaaacagttg-ttttg 227
Query: 245 ttttgctttgttttgttttg 264
||||| ||||||||||||||
Sbjct: 226 ttttgttttgttttgttttg 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 668
Length adjustment: 9
Effective length of query: 258
Effective length of database: 659
Effective search space: 170022
Effective search space used: 170022
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no060_m14.g1 MSMg01no060_m14.g1 CHROMAT_FILE:
MSMg01no060_m14.g1 PHD_FILE: MSMg01no060_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:36 2005
(342 letters)
>mm_chr18_77778797_77779538
Length = 742
Score = 642 bits (332), Expect = 0.0
Identities = 338/340 (99%)
Strand = Plus / Plus
Query: 1 agagtgagtggggttgaacttggtgtggagcactctgaacatagacatgggcttgacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagtgagtggggttgaacttggtgtggagcactctgaacatagacatgggcttgacctt 260
Query: 61 gatctgaagtactttgaatgcagcgtgagtgtagctcaacttgatgtgaaatactctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatctgaagtactttgaatgcagcgtgagtgtagctcaacttgatgtgaaatactctgaa 320
Query: 121 cacagagtgagtggggttgggatactgagcttccctgacacaagctgcccaagcttcact 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacagagtgagtggggtcgggatactgagcttccctgacacaagctgcccaagcttcact 380
Query: 181 ggccaaggtttgcatactctatgtctacaaatggcaacatgtggggggctttcctttgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggccaaggtttgcatactctatgtctacaaatggcaacatgtggggggctttcctttgtt 440
Query: 241 caacaagaggggcctggctgagccactgtgtatttgagtgtcaaggtttcctagtaaaac 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 caacaagaggggcctggctgagccactgtgtatttgagtgtcaagggttcctagtaaaac 500
Query: 301 taaatcatgagccagaagcatgacatctagaatggaatcc 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaatcatgagccagaagcatgacatctagaatggaatcc 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
