XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TTTGTTTACCTCTATACCCCATTTTTAATAGGGTTATGTCATTTTCAGGA
GTCCAACTTCTTGAGTTCTTTATATATATTGGCTATTAGTCCCCTATCAA
ATTTAAGATTGGTAAAGATCTTTTCCTAATCTGTTGGTTGCCATTTTGTC
TTATTGACAGTGTCCTTTGCCTTACAGAAGCTTTGCAATTTTATGAGGTC
CCATTCTTGATCTCAAAGCACAGGCCAATGCTTTTCTTTTTTTCTTTTCT
TTCTTTTTTTTTTTAATTAGGTATTTTCCTGGTTTACATTTTCAATGCTA
TCACATAAGTCTCCCATACCCACCCCCACAATCCCCTACCCACCCACTCC
CCCTTTTTGGCCCTGCGTGTTCCCCTGTACTGGGGCATATAAAGTTTGCA
AGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATATTTTGA
TGCTTTTCTGTTAAGGAATTTTTCCCCTGTGCCCATATCTTTGAGGCTAT
TCGCCACTTTCTCCTCCATAAGTTTCAGTTTCTCTGGTTTTATGTGGAGT
TCCTTAATCCCCTTAGGGTTGAGCTTTTTACAAGGAGATAAGAATAGGTC
AATTTGCATTCTTCTACATGCTAACCACCAGTTGAGCCAGCACGATTTGT
TGA

AAAAAACCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGTTTCGCACTGTAT
ACATATTTATTATTATTTGTTTTATTGATGTCTAATATCTTGAGTTTTTA
AAGTACATTTTGGATATAGTTCTTTGTCAGAGATGGACAAAAGTAAGTGT
ACACACACAAAAGCACATGCACCTATACATATGTACAAGAACATATATAA
GCACATACACATAAATACAAAACCACATATACACATAAGCATACACAAAC
ACACAGCACACAAATATAAAAACATATACACACATACACCCATACACACA
CACACACAAACATATACATATACACACACACACGTGTATTTATTTTGTTA
AACTAACAGCCCCTTTCTTATCAGTTTAGGTTGACAGTTTTTCTGCTCTG
GATGTTTGTGGTTCATGCAGGTCAACTCTGACATGAGTTGGTGAGATCTT
TTTCCATTCTGGAAGCTGCCATTTTGTCCTATTGAAGGTGTCCTTTGCCC
TATGGAAGCTTTTCAGTTTCATGCAGTACAATTGATTAATTGTTGATCTT
AGTGCCCTTGAGTCCTCACCATATGCAAAACACTACAGTCAACTAAACAG
TGCTGAGAGAATGAAAAGGGCAGTACTCTTTAGTGTAACAGTTGTATGAA
CGTTCTGTGTGAAA

Query= MSMg01no060_n05.g1 MSMg01no060_n05.g1 CHROMAT_FILE:
MSMg01no060_n05.g1 PHD_FILE: MSMg01no060_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:39 2005
         (631 letters)



>mm_chr18_41162630_41163660
          Length = 1031

 Score = 1178 bits (609), Expect = 0.0
 Identities = 624/631 (98%), Gaps = 4/631 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctgtttcgcactgtatacatatttattattatttgttttattgatgtctaatatcttga 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 tctgtttcacactgtatacatatttattattatttgttttattgatgtctaatatcttga 838

                                                                       
Query: 61  gtttttaaagtacattttggatatagttctttgtcagagatggacaaaagtaagtgtaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gtttttaaagtacattttggatatagttctttgtcagagatggacaaaagtaagtgtaca 778

                                                                       
Query: 121 cacacaaaagcacatgcacctatacatatgtacaagaacatatataagcacatacacata 180
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 777 cacacaaaagcacatgcacctatacatatgtacaagcacatatataagcacatacacata 718

                                                                       
Query: 181 aatacaaaaccacatatacacataagcatacacaaacacacagcacacaaatataaaaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 aatacaaaaccacatatacacataagcatacacaaacacacagcacacaaatataaaaac 658

                                                                       
Query: 241 atatacacacatacacccatacacacacacacacaaacatatacatatacacacacacac 300
           ||||||||||||||||||||||||||||||||    ||||||||||||| ||||||||||
Sbjct: 657 atatacacacatacacccatacacacacacac----acatatacatatatacacacacac 602

                                                                       
Query: 301 gtgtatttattttgttaaactaacagcccctttcttatcagtttaggttgacagtttttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtgtatttattttgttaaactaacagcccctttcttatcagtttaggttgacagtttttc 542

                                                                       
Query: 361 tgctctggatgtttgtggttcatgcaggtcaactctgacatgagttggtgagatcttttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgctctggatgtttgtggttcatgcaggtcaactctgacatgagttggtgagatcttttt 482

                                                                       
Query: 421 ccattctggaagctgccattttgtcctattgaaggtgtcctttgccctatggaagctttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccattctggaagctgccattttgtcctattgaaggtgtcctttgccctatggaagctttt 422

                                                                       
Query: 481 cagtttcatgcagtacaattgattaattgttgatcttagtgcccttgagtcctcaccata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagtttcatgcagtacaattgattaattgttgatcttagtgcccttgagtcctcaccata 362

                                                                       
Query: 541 tgcaaaacactacagtcaactaaacagtgctgagagaatgaaaagggcagtactctttag 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgcaaaacactacagtcaactaaacagtgctgagagaatgaaaagggcagtactctttag 302

                                          
Query: 601 tgtaacagttgtatgaacgttctgtgtgaaa 631
           |||||||||||||||||||||||||||||||
Sbjct: 301 tgtaacagttgtatgaacgttctgtgtgaaa 271


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space:   634041
Effective search space used:   634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)