GGTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGATCCGC
GGAATTCTTTATATTTCAGAGGGATGAAGTTATTGGCAAACGATTTGAAT
CTCCATATATCTCTAAATGTGTTTGCAAACTAGATAGGTTGTTATATAGA
CTGATGCTATTTTTCCTCTATTTTACCATATGTAGCCATAAGTTTTCAGT
AGTAATCTTTCTAACATTGTTTTTGGAAGGTGAATATGATAGTGTGTACA
TGGATGGATCAACACTTGAGATTCAAGGCTAGCCTGTGCTACTTAGTGAT
ATCTACCATGCTCGTTCAAATGCGTCATGCACGCACGCACGTGCATACAC
ACACACACACACACACACACACACACACACACACACACACACAGAGAGAG
AGGGAGAGAGAGAGAGAGAGAACCCAGAGAATTCCCCAGTCTAAAAGGTG
ATGAGGTCTGCCTTTAAATTTTTCATAGAGAACAGTATTGCCATTTGATA
TTCTGAGCTCTTACATGAGATGCTGTTCATACAATATGCTATAACTATTT
GCCTAACAGTTTCCTTTACTTCGTTGGGGATTTCCATTCATTTCCCCCTT
CATTTTGAAGAACTTGTTTGCTTTGGGAGTTTCATCTTCCTTCTTGCTCC
AATACATGGCACACATCTTATTCATTTCCATGAGTGTTACCCCACTT

TTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGTCATTAGTCACACATTTTG
ACAGGAAGGAATCTAAAAATTCGCATGAATAATTTTACTCTCATTCTCAT
GACTAAAATGTACTCTGAATTGCCAAACATCATCCTCTGTCAATTTTCTC
CAGTTTTCTATTTTAGATGATGCAGAAATTTCTGGGTTTTCAACTATATT
TATTAAAAGCAAAGAACAATACAACAACACCACAAAGGTTATGCCTACTT
CATTGTCCTCTTGAACTCTCTTAAAAGGTCTGGCAAAACTCACTAAAAAA
ATTAGGAGATAATATAACATTTACCTAAGATATTCCTTCAGGATACAATT
GTATATGTTAAAATATGTGTCATTTTAGTAGCAATTTTAAATATAATTAA
TGACAGTTAATGAGTAATAATGATTAGTCATAAATGGATATCTAGGATAA
TAACAAATATATCAGGATACAATAAAAATAAGGTCACTAAAGTTCCATAA
TGTGGTTTAGATATATAGATCTCAATGTATCTGCATAATGATAGCAACAC
TAAACTGGCTTAATTATATCTTCTAAATACTGGGAATGCTGACACACATA
TACAAATCACTACATCTTAATTCTTCTAAGTAGACTTCCTCAAGAAAAA

Query= MSMg01no061_m17.b1 MSMg01no061_m17.b1 CHROMAT_FILE:
MSMg01no061_m17.b1 PHD_FILE: MSMg01no061_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:52 2005
         (577 letters)



>mm_chr18_48744179_48745155
          Length = 977

 Score =  977 bits (505), Expect = 0.0
 Identities = 562/583 (96%), Gaps = 6/583 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagttattggcaaacgatttgaatctccatatatctctaaatgtgtttgcaaactag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 atgaagttattggcaaacgatttgaatctccatatatctctaaatgtgtttgcaaactag 254

                                                                       
Query: 61  ataggttgttatatagactgatgctatttttcctctattttaccatatgtagccataagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ataggttgttatatagactgatgctatttttcctctattttaccatatgtagccataagt 314

                                                                       
Query: 121 tttcagtagtaatctttctaacattgtttttggaaggtgaatatgatagtgtgtacatgg 180
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tttcagtagtaatttttctaacattgtttttggaaggtgaatatgatagtgtgtacatgg 374

                                                                       
Query: 181 atggatcaacacttgagattcaaggctagcctgtgctacttagtgatatctaccatgctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 atggatcaacacttgagattcaaggctagcctgtgctacttagtgatatctaccatgctc 434

                                                                       
Query: 241 gttcaaatgcgtcatgcacgcacgcacgt----gcatacacacacacacacacacacaca 296
           ||||||||||| ||||||||||||||||     |||||||||||||||||||||||||||
Sbjct: 435 gttcaaatgcgccatgcacgcacgcacgcacgcgcatacacacacacacacacacacaca 494

                                                                       
Query: 297 cacacacacacacacacacacacagagagagag-g-gagagagagagagagagaacccag 354
           |||||| | | | | | | | | |||||||||| | ||||||||||||||||||| | ||
Sbjct: 495 cacacagagagagagagagagagagagagagagagagagagagagagagagagaatctag 554

                                                                       
Query: 355 agaattccccagtctaaaaggtgatgaggtctgcctttaaatttttcatagagaacagta 414
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 agaattccccagcctaaaaggtgatgaggtctgcctttaaatttttcatagagaacagta 614

                                                                       
Query: 415 ttgccatttgatattctgagctcttacatgagatgctgttcatacaatatgctataacta 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ttgccatttgatattctgagctcttacatgagatgctgttcatacaatatgctataacta 674

                                                                       
Query: 475 tttgcctaacagtttcctttacttcgttggggatttccattcatttcccccttcattttg 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tttgcctaacagtttcctttacttcgttggggatttccattcatttcccccttcattttg 734

                                                      
Query: 535 aagaacttgtttgctttgggagtttcatcttccttcttgctcc 577
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 aagaacttgtttgctttgggagtttcatcttccttcttgctcc 777


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space:   548289
Effective search space used:   548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)