AATXXXXXXXXXXXXXXXXXXXXXXXXAATACGAAAGAGGATCCGCGGAA
TTCTATATTCCTCAAAAGGCAGCAGAAAGAGAACTGAGGCACACCTCAAA
GCCCACCCTATATTGACCCACTATCTCCAACAAAGCCATATCTACTCCAA
CAAGACCACAACTCCTAATATTGCTACTCCCTGTGGGTCTAGGGGGCCAT
TTTATTTCGAACTACCACAAGGAGGAATACAAGTTATTTACTGTCTCTGA
TGTAAGACTTTAATAATACTGAGAACTCAATGGTATTCAATGACTGTTGG
TTAAAATTGGAAAATATCTGCAATGGCATTCTACTGGAGATAGGGTAGAA
ACTTGTTTGAAAGCGACGCACGCTACTGAATGCCACAGCTGCTGATGGTT
AAAGGTAAAGAAAAGGGTAATTTTGTCTGTACATCTCAAAGATTCTTGGA
AGATTCTTGATAAGAGTCTAAAGCCTAAGCCAATATGAACATCGAATTTT
AAAAATGAAATTATATTATTTTTCTATATAAATATTTGAACTGTGAAATA
GAGACCAAGCTAATTTTTTTTTTACAATTCATTTATAAATTTTAAGAATA
AAACACTAGCTATACCTTTTGCTGTGGACCTATATTTCTCCAATTTTATA
ATATAAGAATTTAAAATAAAAGATTAATCAAGGATTA

CAATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTGTTGAGGTCCCCATGCCAATGGGAA
CACATTTGGAAGAAGGCATTTTGAGGACATGCACCACTAAGTTTTGATGC
CCCTGTCATTTAAGTACCCACATAAATACTGAAAACAAGGATTGCTAGTT
TTGGTTTGGTTTTTGAGGTTTCAGGCCAAGATTTTGGGGAGGGCAGAAGA
TCTGCTAACACCTAACCCCTTGGTAGGCCGCTATTAGGTATGAGACACGA
GGATGCCTTGAGACCTGCCCCTGCCCTTTTGCCCTGTGTAGTGTCTTCCC
CTTCACTTACTCTTCTGGAAACACAATCACAGACATTCTCAGTCCAGTCA
GGTTGACAGTCAACATTAACCAGGGCAGGAAGTAAGTGGAGCTTAAATTT
AATCTTTAGTGAGGGATGCTTGCTGAGTAGGATGAAGAAAACAGAAAAGT
ATGGTTTTTTGTACATATCTACCTGGTTTTGCTTGCCTGAAGCAGACAAA
TCAGGTGTCGGATGGAGTCTGGCAAGGGTTCTATTGGAGTCTTGCAAGTG
GCACTTTGGTCTGAAATATTCAGACCTCTGAGAAATTTGATTTTGCCTAT
GCAATTGTCCCAAGGGCTGCTTGATACCTAAACT

Query= MSMg01no063_h05.b1 MSMg01no063_h05.b1 CHROMAT_FILE:
MSMg01no063_h05.b1 PHD_FILE: MSMg01no063_h05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:49 2005
         (287 letters)



>mm_chr18_84566844_84567530
          Length = 687

 Score =  524 bits (271), Expect = e-153
 Identities = 283/287 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggcagcagaaagagaactgaggcacacctcaaagcccaccctatattgacccactatctc 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 ggcagcagaaagagaactgaggcacacctcaaagcccaccctatattgacacactatctc 260

                                                                       
Query: 61  caacaaagccatatctactccaacaagaccacaactcctaatattgctactccctgtggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caacaaagccatatctactccaacaagaccacaactcctaatattgctactccctgtggg 320

                                                                       
Query: 121 tctagggggccattttatttcgaactaccacaaggaggaatacaagttatttactgtctc 180
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 tctatggggccattttatttcgaactaccacaaggaggaatacaagttatttactgtcgc 380

                                                                       
Query: 181 tgatgtaagactttaataatactgagaactcaatggtattcaatgactgttggttaaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgatgtaagactttaataatactgagaactcaatggtattcaatgactgttggttaaaat 440

                                                          
Query: 241 tggaaaatatctgcaatggcattctactggagatagggtagaaactt 287
           ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggaaaaaatctgcaatggcattctactggagatagggtagaaactt 487


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space:   188484
Effective search space used:   188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no063_h05.g1 MSMg01no063_h05.g1 CHROMAT_FILE:
MSMg01no063_h05.g1 PHD_FILE: MSMg01no063_h05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:49 2005
         (603 letters)



>mm_chr18_84661808_84662810
          Length = 1003

 Score =  907 bits (469), Expect = 0.0
 Identities = 469/469 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgttgaggtccccatgccaatgggaacacatttggaagaaggcattttgaggacatgca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ctgttgaggtccccatgccaatgggaacacatttggaagaaggcattttgaggacatgca 410

                                                                       
Query: 61  ccactaagttttgatgcccctgtcatttaagtacccacataaatactgaaaacaaggatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ccactaagttttgatgcccctgtcatttaagtacccacataaatactgaaaacaaggatt 350

                                                                       
Query: 121 gctagttttggtttggtttttgaggtttcaggccaagattttggggagggcagaagatct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gctagttttggtttggtttttgaggtttcaggccaagattttggggagggcagaagatct 290

                                                                       
Query: 181 gctaacacctaaccccttggtaggccgctattaggtatgagacacgaggatgccttgaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gctaacacctaaccccttggtaggccgctattaggtatgagacacgaggatgccttgaga 230

                                                                       
Query: 241 cctgcccctgcccttttgccctgtgtagtgtcttccccttcacttactcttctggaaaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 cctgcccctgcccttttgccctgtgtagtgtcttccccttcacttactcttctggaaaca 170

                                                                       
Query: 301 caatcacagacattctcagtccagtcaggttgacagtcaacattaaccagggcaggaagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 caatcacagacattctcagtccagtcaggttgacagtcaacattaaccagggcaggaagt 110

                                                                       
Query: 361 aagtggagcttaaatttaatctttagtgagggatgcttgctgagtaggatgaagaaaaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 aagtggagcttaaatttaatctttagtgagggatgcttgctgagtaggatgaagaaaaca 50

                                                            
Query: 421 gaaaagtatggttttttgtacatatctacctggttttgcttgcctgaag 469
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49  gaaaagtatggttttttgtacatatctacctggttttgcttgcctgaag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space:   588849
Effective search space used:   588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)