Query= MSMg01no064_m17.b1 MSMg01no064_m17.b1 CHROMAT_FILE:
MSMg01no064_m17.b1 PHD_FILE: MSMg01no064_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:01 2005
(684 letters)
>mm_chr18_75582145_75583222
Length = 1078
Score = 1241 bits (642), Expect = 0.0
Identities = 671/688 (97%), Gaps = 14/688 (2%)
Strand = Plus / Plus
Query: 1 aacaaaaggggtgtctagagaaagccagcc----ccctcaaggctttaaggagccgtacc 56
|||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 201 aacaaaaggggtgtctagagaaagccagccagag----caaggctttaaggagcagtacc 256
Query: 57 caggcacacggccacgtagtcccagaggacatacatgaagctcctgctcttaacccccct 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 caggcacacggccacgtagtcccagaggacatacatgaagctcctgctcttaacccccct 316
Query: 117 gttatgaccaccagcagtaaatagcaaaacccaaaacaataaatccagacaagggggcgc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gttatgaccaccagcagtaaatagcaaaacccaaaacaataaatccagacaagggggcgc 376
Query: 177 taaccatgatggctttacctagctgagcggctgcggtgggggacctggcggtaaataaac 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 taaccatgatggctttacctagctgagcggctgcggtgggggacctggcggtaaataaac 436
Query: 237 gagcaaaaagactgtaaatcaccctgggagaccagatcgatacacagggaacttgaccca 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gagcaaaaagactgtaaatcaccctgggagaccagatcgatacacagggaacttgaccca 496
Query: 297 actctcaccagggagtgtgtgtgccaatagtcctgagcaacggggtggggactctccagg 356
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 497 actctcaccagggagtgtgtgtgccagtagtcctgagcaacggggtggggactctccagg 556
Query: 357 ctctgctggtacggagaagaggaaaccctgtttggaacacagggtcgcagcccggctctg 416
||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 557 ctctgctggtacggagaag------ccctgtttggaacacagggtcgcagcccgcctctg 610
Query: 417 ctgggagcttgcggagctaccccggggctggtggctggatctctctgagctgccttcact 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ctgggagcttgcggagctaccccggggctggtggctggatctctctgagctgccttcact 670
Query: 477 tgggctgtgaatcaaacaggcaccaatattctaagaccccagttccctatgctctagtct 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tgggctgtgaatcaaacaggcaccaatattctaagaccccagttccctatgctctagtct 730
Query: 537 ggggtgaatgacagttctgccaagaccccagctggccagtgacaggaagacagcaacgca 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ggggtgaatgacagttctgccaagaccccagctggccagtgacaggaagacagcaacgca 790
Query: 597 cggtacagggagcaattttactggaaagatgagaggaaattgcatctttaataattcacc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 cggtacagggagcaattttactggaaagatgagaggaaattgcatctttaataattcacc 850
Query: 657 ggccggtttggagagaggcaggttggcg 684
||||||||||||||||||||||||||||
Sbjct: 851 ggccggtttggagagaggcaggttggcg 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1078
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1068
Effective search space: 719832
Effective search space used: 719832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no064_m17.g1 MSMg01no064_m17.g1 CHROMAT_FILE:
MSMg01no064_m17.g1 PHD_FILE: MSMg01no064_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:01 2005
(382 letters)
>mm_chr18_75690757_75691538
Length = 782
Score = 673 bits (348), Expect = 0.0
Identities = 369/376 (98%)
Strand = Plus / Minus
Query: 6 aagtgaaggttatagcttcgtgtctggtgcaagtccctagtgttctggaaggccctgccc 65
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 581 aagtgaaggttatagcttcgtgtccggtgcaagtccctagtgttctggaaggctctgccc 522
Query: 66 caagaaagtatcttctgggaagcatgtccccaggtggcctgactggagagaggctgaggc 125
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 caagaaagtattttctgggaagcatgtccccaggtggcctgactggagagaggctgaggc 462
Query: 126 catgtgtgagcctgttgaaggtcctttggggtcatgtctcaccacagattcatccttcca 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 catgtgtgagcctgttgaaggtcctttggggtcatgtctcaccacagattcatccttcca 402
Query: 186 tcagctccaactgaaaaatgtgacccaagggaggcgctgcctcagtcaacgccattttgc 245
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 401 tcagctccaactgaaaaatgtgacccaagggagacgctgcctcagtcaacgccattttgc 342
Query: 246 atttcctctccttcctgggatggaacaaatggcccttcagggacagtgaacctgtcagta 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 atttcctctccttcctgggatggaacaaatggcccttcagggacagtgaacctgtcagta 282
Query: 306 atgaaattgtgagaggaggcggctgtctttagagggaggctgctggggtgggggtggcta 365
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 281 atgaaattgtgagaggaggcggctgtcccgagagggaggctgctggggtgggggtggcta 222
Query: 366 atggattaatgtagtg 381
||||||||||||||||
Sbjct: 221 atggattaatgtagtg 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
