Query= MSMg01no067_l01.b1 MSMg01no067_l01.b1 CHROMAT_FILE:
MSMg01no067_l01.b1 PHD_FILE: MSMg01no067_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:52 2005
(193 letters)
>mm_chr18_24833205_24833802
Length = 598
Score = 331 bits (171), Expect = 2e-95
Identities = 188/197 (95%), Gaps = 7/197 (3%)
Strand = Plus / Minus
Query: 1 agctgtggtgtggtctgacgtatctctgtggtacgtgaagtgacctcagctgtggtgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 agctgtggtgtggtctgacgtatctctgtggtacgtgaagtgacctcagctgtggtgttc 337
Query: 61 tgcttttctgac------agatgccgtcattttcaggcaagttgtcatctgcgccctgac 114
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgcttttctgtctgatttagatgccgtcattttcaggcaagttgtcatctgcgccctgac 277
Query: 115 cctttctctctacctaagaaggctaaagacacacacaggtcaagcttgggcagaattgtg 174
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 276 cctttctctctacctaagaaggctaaagacacacacagg-caagcttgggcagaattgtg 218
Query: 175 tactcatgagagttgaa 191
||||||||||| |||||
Sbjct: 217 tactcatgagaattgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 598
Length adjustment: 8
Effective length of query: 185
Effective length of database: 590
Effective search space: 109150
Effective search space used: 109150
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no067_l01.g1 MSMg01no067_l01.g1 CHROMAT_FILE:
MSMg01no067_l01.g1 PHD_FILE: MSMg01no067_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:52 2005
(193 letters)
>mm_chr18_24767254_24767846
Length = 593
Score = 366 bits (189), Expect = e-106
Identities = 192/193 (99%)
Strand = Plus / Plus
Query: 1 agttccttcctgttctgcattatgatccaggcacaagtgcagaatttgcttgaattggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttccttcctgttctgcattatgatccaggcacaagtgcagaatttgcttgaattggtg 260
Query: 61 agacttctatggttttatctatgatattaaaagaaaaagcttaatacattcactacctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacttctatggttttatctatgatattaaaagaaaaagcttaatacattcactacctat 320
Query: 121 ctcaactggtaaatcagaataactctgcctcaagtcagtaaaagccactatataatacaa 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 ctcaactggtaaatcagaataactctgccttaagtcagtaaaagccactatataatacaa 380
Query: 181 aggacagctttta 193
|||||||||||||
Sbjct: 381 aggacagctttta 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 593
Length adjustment: 8
Effective length of query: 185
Effective length of database: 585
Effective search space: 108225
Effective search space used: 108225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
