CTATAAANAAAATATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXGCCNNAAAGGGNNNNGAAAGGGGGGCNNAAAATNCCCCCCCCGGGGG
GNNNCCNCCCGGGGGGGGCNGAGNGCNNNNNNNNNNNCNAAAAAATCTTC
GTTTTCCATTTTTGCAACTTTTTCAGGTTGGAACCGTTTAACCTTTTTTA
ATCTGGTTTAAATAAAAGGTTCGGGTTAAAATAAACCTTTTATGCCTTTG
GTTTTAAAAATCCCTATTCCCTAAAAAAATAAACCCGTGCATCCACCTCT
TTCTTGGTTTTTTGTTTTTTTTAGGGAAAAAAAGACCNGCCCCGNNNATG
GGCTCAAGGCTAAATTTTTAAAAATTANNGGGNNCTATTCCTTTTTATTT
CTNTTTGGAAAGAGGGAGTAAAAATCACCCCCGCCAGGGGTTTTCTCTCC
CAGCGTTTTATTTGGGAAAAAGTTTTATTTTAAGAAAAAAAAACATTCTT
CTTCCCTTGAAAAAAAATCGGGAAAGAGGAAATTTATCCTTTTGGGGAGA
AAAACCCACCTCTATAAATTTGGTGACCACAAATAAACACAAATCCCCAA
AAAAAAATTCATCACTTTTCCTCTCGTTGGTGTTTTTTTTTTTTTTTGTG
GCAAACAACACAACCCCCCCCACAAAAAAAACCTATCTTCTTACTTTATA
N

NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCNNNNNNNNNNNNN
NNNNCCCCCCCCCCCCCNNNNCCCCCTTTATCCTNNNNNCTCTATGCTXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATAATCAGTATCTGTCATGTGTAGG
ACTTGCCTTCCTAATTCTAAGCAGAAGAAAAGCACATTTGGGTAGAATTC
AAGAGATGTGAGGGTCATTTCTGACGGCTGCATTGCATTCAAGCATATTG
ACCCAACTTTTAAATGGGAAATGAACAGATAGGCAGATAGGTGTTAATAT
GATGAAATAATGTCTTTGAGGGTACAGGTCAGATGAAAAATGTAGAGATA
GCGCTAGCTATAGTTAGTGTACTCTGATATGTTAGGCTTTTGTCATTTAG
GGTGTGTGTGTGTGTTGATTGCAACAATAGAAACATGACTAAGACATCAG
TATATAAAATAAACTATATTTTCCAGGTTTTGTGATAAATAGGAATATTT
CTAAGGATACCTGTATCCTAGTTAACTACACAACCCCAAATATAGACTTT
AAAAAGCAGCCGACGTTAATGCTATTATAACATCTGACACAGAATTTGGA
GCACATTTGAGGAACCGTATAGAGACTGGATTCACATAGTTGTCACCATG
GCAAGCCCTATTCCTTTTGATTGGTAGAATGGGTCCACTGTGGGCCTTAT
GTTGTATCCTATGAAA

Query= MSMg01no074_d03.g1 MSMg01no074_d03.g1 CHROMAT_FILE:
MSMg01no074_d03.g1 PHD_FILE: MSMg01no074_d03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:29 2005
         (429 letters)



>mm_chr18_59193834_59194662
          Length = 829

 Score =  772 bits (399), Expect = 0.0
 Identities = 425/441 (96%), Gaps = 12/441 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   ataatcagtatctgtcatgtgtaggacttgccttcctaattctaagcagaagaaaagcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 189 ataatcagtatctgtcatgtgtaggacttgccttcctaattctaagcagaagagaagcac 248

                                                                       
Query: 61  atttgggtagaattcaagagatgtgagggtcatttctgacggctgcattgcattcaagca 120
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 249 atttgggtagaattcaagagatgtgagggtcatttctgacagctgcattgcattcaagca 308

                                                                       
Query: 121 tattgacccaacttttaaatgggaaatgaacagataggcagataggtgttaatatgatga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tattgacccaacttttaaatgggaaatgaacagataggcagataggtgttaatatgatga 368

                                                                       
Query: 181 aataatgtctttgagggtacaggtcagatgaaaaatgtagagatagcgctagctatagtt 240
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aataatgtctttgagggtactggtcagatgaaaaatgtagagatagcgctagctatagtt 428

                                                                       
Query: 241 agtgtactctgatatgttaggcttttgtcatttagggtgtgtgtgtgtgt---------- 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||          
Sbjct: 429 agtgtactctgatatgttaggcttttgtcatttagggtgtgtgtgtgtgtgtgtgtgtgt 488

                                                                       
Query: 291 --tgattgcaacaatagaaacatgactaagacatcagtatataaaataaactatattttc 348
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 489 gttgattgcaacaatagaaacataactaagacatcagtatataaaataaactatattttc 548

                                                                       
Query: 349 caggttttgtgataaataggaatatttctaaggatacctgtatcctagttaactacacaa 408
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 caggttttgtgataaataggaatatttctaaggatacctgtatcctagttaactacacaa 608

                                
Query: 409 ccccaaatatagactttaaaa 429
           |||||||||||||||||||||
Sbjct: 609 ccccaaatatagactttaaaa 629


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space:   344400
Effective search space used:   344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)