ATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGGAA
TTCTCACCTGAGCATACCGAATGGCAGAGAAGAACCCTGTTATCTATCCC
AGTGAGAGTTCGGATAGCAAGATGCTAGAAGATGGGAACAGGAAAGAAAG
CGTTCACTGATAGCTTTTCGATCTGAGAGAAACTAGAGATCTGTAACTGG
AATTGAGAGGAAAGGATGGATTTTGAATTACAGGCAGAAGAAGGCACATC
TGTGGAGAAATGAAAGTGCAGAGTGGTTAGAACAAGGCATGTATGCTATA
AGTGGGGCAAGAAAGAGGACTTGGATAAACAGTTTAGCAGAATCAGGTGG
TGTGCTGTCGTTACTTCTAATTCCTAACAATGTTCTTTATAGGAAATCCA
GTTATTTCTCCACTTGGAGCTTAGAAGAAATACAATCAAGTGTCCTCATC
TGTTAATTTCCTGTCATAAAAGATGGTAACACATGAGTTTTATGATATAT
GATGTGCTTGGGTAGAGAGAAAAGAGAATGGGAAACTCCTCTTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGGGGG
GGTGCTGATTCTGAGTCACATTTTGTTCTATTATTCTATGATCTGAGGCC
ATTTCTTTCATTCCTATCTTACAAACAGTCTCCCATCAACATCTAGTTCT
TCCTGCATAGATT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXTTTGTTTAGCTGTGAGCCCCATTTTTTAATGTGGCTATTTGATTT
TCTGGAGTCCACCTTCTTGAGTTCTTTATATATACATACTATATATATAT
ATATATATATATATATATATATAGTATGTATATATATATTGGACATCCGC
CGCCGCCCCGCCGTACCCCACGCCACGCTCCCCTCCCTCGCCGCCGCTCG
CCCCCCCCCGCCCCCGCCCCGACGCCTCTCGCCCCACACCCGCCCCCCAC
CCCCTCGCGCCCGCCCCGCCCCCTGCACCCCCTTCTGCCCCCGCCCCTCC
CCGCCCCTACCCACTCCCCCCCCCTGCGCCACCCCCCCTCCGCCCCCCCC
CCCCCCCCTCCCCTCTCCCCCCCCCCCCGCCCCCCCCTCCCCCTCTCCCC
CCCCTGCCCCGCCCCCACGCCGCCTCCCCCCCCCGCCCCTGCCCCCCCCC
CCCTTCCCCCTCCCCCCCTCCCCCGCCGCCCCCCTCCTTCCCCCCCCCGT
CTCCCCCCCCGCCCCCCCCCTCCCCCCCCCCTCCCCCCCCGCTCCCCCTC
CCCCCCCCCCCCCCCCCCCTCTCTCCCCTTCCCCCCCCCTCTGTGCTCCG
CCGCCGTCGCCCTCCCCCCCCCCCCCGCCCCCCCCCTCTCCCCCCCCCGC
CCCCCCCCCCCGCCCCTCCCCCCC

Query= MSMg01no076_e10.b1 MSMg01no076_e10.b1 CHROMAT_FILE:
MSMg01no076_e10.b1 PHD_FILE: MSMg01no076_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:11 2005
         (568 letters)



>mm_chr18_31032767_31033734
          Length = 968

 Score =  938 bits (485), Expect = 0.0
 Identities = 541/563 (96%), Gaps = 7/563 (1%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattctcacctga-gcataccgaatggcagagaagaaccctgttatctatcccagtgag 65
           |||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctcacctgaggaatactgaatggcagagaagaaccctgttatctatcccagtgag 265

                                                                       
Query: 66  agttcggatagcaagatgctagaagatgggaacaggaaagaaagcgttcactgatagctt 125
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 266 agttcggatagcaagatgctagaagatgggaacaggaaagaaagcgttccctgatagctt 325

                                                                       
Query: 126 ttcgatctgagagaaactagagatctgtaactggaattgagaggaaaggatggattttga 185
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 326 ttcgatctgagagaaactagagatctgtaactggaattgagaggaaaggatgcattttga 385

                                                                       
Query: 186 attacaggcagaagaaggcacatctgtggagaaatgaaagtgcagagtggttagaacaag 245
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 386 attacaggcagaagaaggcacatctgtggagaaatgaaagtgcagagttgttagaacaag 445

                                                                       
Query: 246 gcatgtatgctataagtggggcaagaaagaggacttggataaacagtttagcagaatcag 305
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gcatgtatgctgtaagtggggcaagaaagaggacttggataaacagtttagcagaatcag 505

                                                                       
Query: 306 gtggtgtgctgtcgttacttctaattcctaacaatgttctttataggaaatccagttatt 365
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gtggtgtgctgttgttacttctaattcctaacaatgttctttataggaaatccagttatt 565

                                                                       
Query: 366 tctccacttggagcttagaagaaatacaatcaagtgtcctcatctgttaatttcctgtca 425
           ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 566 tcttcacttggagcttagaagaaatacaatcaagtgtcctcatttgttaatttcctgtca 625

                                                                       
Query: 426 taaaagatggtaacacatgagttttatgatatatgatgtgcttgggtagagagaaaagag 485
           ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 626 taaaagatggtaacacatgagttttctgatatatgatgtacttgggtagagagaaaagag 685

                                                                       
Query: 486 aatgggaaactcctcttctctctctctctctctctctctctctctctctctctctctctc 545
           ||||||||||||||||||||||||||||||||||||||||||||||||| | | | |   
Sbjct: 686 aatgggaaactcctcttctctctctctctctctctctctctctctctctgtgtgtgt--- 742

                                  
Query: 546 tctgtgtgtgggggggtgctgat 568
              ||||||||||||||||||||
Sbjct: 743 ---gtgtgtgggggggtgctgat 762


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space:   534564
Effective search space used:   534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)